EBG00000313339 - n.2377C>G
Drug resistance types
72 Sensitive
18 RR-TB
40 HR-TB
42 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 110 |
| La1.7.1 | 3 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1 | 44 |
| lineage4.9.1 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| lineage2.2.2 | 6 |
| lineage2.2 | 3 |
| lineage4.6.3;lineage4.9 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.3 | 7 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.8.1 | 6 |
| lineage2.1;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.8.1 | 2 |
| lineage4.9;lineage9 | 3 |
| lineage3 | 4 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.4.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.2 | 2 |
| 3 | |
| lineage5.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.8 | 11 |
| lineage4.4.2 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.1 | 2 |
| La3;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR7240538 | Other | La1.7.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR16278274 | Other | La1.4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046087 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR4818536 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR3468613 | Other | La1.8.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR161037 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR2706950 | MDR-TB | lineage5.2 | cd | SRR8692893 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR5535933 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR3675582 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR5341456 | Other | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR8692905 | Sensitive | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR11466445 | Sensitive | lineage4.3.4.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5908124 | Other | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6046376 | Other | lineage3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
