TB-Profiler result

Run: SRR8692822
Summary

Run ID: SRR8692822

Sample name:

Date: 13-08-2023 19:27:38

Number of reads: NA

Percentage reads mapped: NA

Strain: lineage4.9

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 0.98
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rplC 801268 p.Cys154Arg missense_variant 0.88 linezolid
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5415 p.Ala59Asp missense_variant 0.15
gyrB 6480 p.Ala414Glu missense_variant 0.12
gyrA 6598 c.-704C>A upstream_gene_variant 0.12
gyrB 6790 p.Phe517Leu missense_variant 0.14
gyrA 7362 p.Glu21Gln missense_variant 0.25
gyrA 7715 c.414G>C synonymous_variant 0.12
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 0.13
gyrA 7752 p.Asp151Asn missense_variant 0.16
gyrA 7763 c.462T>C synonymous_variant 0.13
gyrA 7769 c.468C>T synonymous_variant 0.13
gyrA 7775 c.474C>G synonymous_variant 0.12
gyrA 7778 c.477G>C synonymous_variant 0.12
gyrA 7784 c.483A>G synonymous_variant 0.12
gyrA 8092 p.Arg264Leu missense_variant 0.12
fgd1 491717 p.Ala312Val missense_variant 0.13
rpoB 760298 c.492G>C synonymous_variant 0.11
rpoB 760310 c.504G>C synonymous_variant 0.11
rpoB 760316 c.510C>G synonymous_variant 0.11
rpoB 760318 p.Ser171Thr missense_variant 0.11
rpoB 760337 c.531C>G synonymous_variant 0.1
rpoB 760340 c.534G>C synonymous_variant 0.1
rpoB 760354 p.Glu183Ala missense_variant 0.12
rpoB 760361 c.555T>C synonymous_variant 0.1
rpoB 760565 c.759A>G synonymous_variant 0.14
rpoB 760591 p.Val262Ala missense_variant 0.2
rpoB 760601 c.795C>T synonymous_variant 0.17
rpoB 760611 c.805T>C synonymous_variant 0.14
rpoB 760625 c.819C>G synonymous_variant 0.15
rpoB 760634 c.828T>C synonymous_variant 0.15
rpoB 760646 c.840C>G synonymous_variant 0.15
rpoB 760655 c.849A>G synonymous_variant 0.17
rpoB 760661 c.855A>C synonymous_variant 0.18
rpoB 760670 c.864G>C synonymous_variant 0.18
rpoB 760715 c.909C>T synonymous_variant 0.17
rpoB 761864 c.2058G>C synonymous_variant 0.1
rpoB 761868 p.Asp688Gln missense_variant 0.11
rpoB 761873 c.2067A>G synonymous_variant 0.12
rpoB 761876 c.2070C>G synonymous_variant 0.12
rpoB 761892 p.Ile696Leu missense_variant 0.12
rpoB 761903 c.2097T>C synonymous_variant 0.13
rpoB 761909 c.2103T>C synonymous_variant 0.13
rpoB 761912 c.2106T>C synonymous_variant 0.14
rpoB 761915 p.Asp703Glu missense_variant 0.14
rpoB 761916 p.Asp704Lys missense_variant 0.17
rpoB 761921 c.2115C>T synonymous_variant 0.15
rpoB 761930 c.2124G>C synonymous_variant 0.17
rpoB 761948 c.2142G>C synonymous_variant 0.24
rpoB 761954 c.2148C>G synonymous_variant 0.18
rpoB 761990 c.2184G>C synonymous_variant 0.19
rpoB 761999 c.2193G>C synonymous_variant 0.2
rpoB 762002 c.2196C>G synonymous_variant 0.2
rpoB 762047 c.2241G>A synonymous_variant 0.23
rpoB 762053 c.2247T>C synonymous_variant 0.23
rpoB 762065 c.2259T>C synonymous_variant 0.25
rpoB 762083 c.2277T>C synonymous_variant 0.14
rpoB 762086 c.2280G>C synonymous_variant 0.14
rpoB 762101 c.2295C>G synonymous_variant 0.11
rpoB 762114 p.Ile770Val missense_variant 0.15
rpoB 762122 c.2316C>T synonymous_variant 0.17
rpoB 762131 c.2325C>G synonymous_variant 0.15
rpoB 762149 c.2343G>C synonymous_variant 0.14
rpoB 762156 p.Val784Ile missense_variant 0.12
rpoB 762167 c.2361T>C synonymous_variant 0.11
rpoB 762176 c.2370T>C synonymous_variant 0.11
rpoC 763031 c.-339T>C upstream_gene_variant 0.13
rpoC 763115 c.-255T>C upstream_gene_variant 0.15
rpoC 763136 c.-234C>T upstream_gene_variant 0.13
rpoC 763148 c.-222G>C upstream_gene_variant 0.17
rpoC 763158 c.-212C>T upstream_gene_variant 0.15
rpoC 763166 c.-204A>G upstream_gene_variant 0.15
rpoC 763169 c.-201A>G upstream_gene_variant 0.16
rpoC 763181 c.-189G>C upstream_gene_variant 0.15
rpoC 763187 c.-183C>G upstream_gene_variant 0.14
rpoC 763190 c.-180C>T upstream_gene_variant 0.14
rpoC 763202 c.-168A>G upstream_gene_variant 0.16
rpoC 763205 c.-165G>C upstream_gene_variant 0.16
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.16
rpoC 763214 c.-156T>C upstream_gene_variant 0.15
rpoB 763227 p.Leu1141Met missense_variant 0.14
rpoC 763232 c.-138C>T upstream_gene_variant 0.15
rpoB 763235 p.Glu1143Asp missense_variant 0.15
rpoB 763241 p.Glu1145Asp missense_variant 0.15
rpoC 763250 c.-120C>T upstream_gene_variant 0.15
rpoC 763411 c.42T>C synonymous_variant 0.1
rpoC 763430 c.61_63delAGGinsCGC synonymous_variant 0.12
rpoC 763435 p.Gln22His missense_variant 0.12
rpoC 763443 p.Tyr25Phe missense_variant 0.12
rpoC 763456 c.87A>G synonymous_variant 0.13
rpoC 763468 c.99G>C synonymous_variant 0.12
rpoC 763486 c.117T>C synonymous_variant 0.13
rpoC 763495 c.126G>A synonymous_variant 0.12
rpoC 764719 c.1350G>A synonymous_variant 0.15
rpoC 764746 c.1377G>T synonymous_variant 0.27
rpoC 764752 c.1383G>C synonymous_variant 0.29
rpoC 764758 c.1389C>G synonymous_variant 0.26
rpoC 764764 c.1395T>C synonymous_variant 0.25
rpoC 764800 c.1431G>A synonymous_variant 0.24
rpoC 764803 c.1434C>T synonymous_variant 0.24
rpoC 764809 c.1440C>T synonymous_variant 0.22
rpoC 764815 c.1446A>G synonymous_variant 0.24
rpoC 764827 c.1458G>C synonymous_variant 0.27
rpoC 765081 p.Gly571Val missense_variant 0.2
rpoC 765106 c.1737G>T synonymous_variant 0.25
rpoC 765800 p.Phe811Leu missense_variant 0.12
rpoC 765811 c.2442T>C synonymous_variant 0.15
rpoC 765814 c.2445A>C synonymous_variant 0.15
rpoC 765820 c.2451G>C synonymous_variant 0.15
rpoC 765823 c.2454C>G synonymous_variant 0.15
rpoC 765826 c.2457T>C synonymous_variant 0.14
rpoC 765835 c.2466C>T synonymous_variant 0.15
rpoC 765861 p.Phe831Tyr missense_variant 0.2
rpoC 765875 p.Val836Ile missense_variant 0.18
rpoC 765886 c.2517C>G synonymous_variant 0.17
rpoC 765892 c.2523T>C synonymous_variant 0.21
rpoC 765898 c.2529C>T synonymous_variant 0.18
mmpL5 775835 c.2646C>G synonymous_variant 0.11
mmpL5 775851 p.Ser877Thr missense_variant 0.11
mmpL5 775889 c.2592C>G synonymous_variant 0.12
mmpL5 775909 p.Leu858Ile missense_variant 0.12
mmpL5 775916 c.2565T>C synonymous_variant 0.12
mmpL5 775949 c.2532G>C synonymous_variant 0.12
mmpS5 778780 p.Lys42Asn missense_variant 0.2
rpsL 781395 c.-165T>C upstream_gene_variant 0.12
rplC 800780 c.-29C>T upstream_gene_variant 0.12
rplC 800799 c.-10G>T upstream_gene_variant 0.12
fbiC 1303375 p.Asp149Tyr missense_variant 0.18
fbiC 1303785 c.855G>T synonymous_variant 0.12
fbiC 1305200 p.Ala757Glu missense_variant 0.12
Rv1258c 1406686 p.Val219Ile missense_variant 0.97
embR 1417480 c.-133G>T upstream_gene_variant 0.12
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.5
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.5
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.5
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.5
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.33
rrs 1472311 n.466C>A non_coding_transcript_exon_variant 0.18
rrs 1472341 n.496G>T non_coding_transcript_exon_variant 0.18
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.18
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.38
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.5
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.57
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.4
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.27
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.27
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.29
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.27
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.29
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.31
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.31
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.38
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.38
rrs 1473074 n.1229C>A non_coding_transcript_exon_variant 0.17
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.2
rrs 1473282 n.1437C>T non_coding_transcript_exon_variant 0.2
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.22
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.3
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.22
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.22
rrl 1474339 n.682C>G non_coding_transcript_exon_variant 0.2
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.27
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.3
rrl 1474495 n.838G>A non_coding_transcript_exon_variant 0.35
rrl 1474496 n.839C>G non_coding_transcript_exon_variant 0.35
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.35
rrl 1474498 n.841G>A non_coding_transcript_exon_variant 0.38
rrl 1474505 n.848C>T non_coding_transcript_exon_variant 0.38
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.38
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 0.43
rrl 1474508 n.851C>T non_coding_transcript_exon_variant 0.43
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.53
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.27
rrl 1474711 n.1054G>A non_coding_transcript_exon_variant 0.18
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.18
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.36
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.43
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.43
rrl 1475395 n.1738T>G non_coding_transcript_exon_variant 0.22
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 0.22
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 0.25
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.25
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.29
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.29
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.29
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.29
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 0.4
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.33
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.33
rrl 1475607 n.1950A>G non_coding_transcript_exon_variant 0.33
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.15
rrl 1475753 n.2096C>T non_coding_transcript_exon_variant 0.2
rrl 1475759 n.2102C>T non_coding_transcript_exon_variant 0.21
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.21
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.21
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.21
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.21
rrl 1475775 n.2118G>A non_coding_transcript_exon_variant 0.22
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.26
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.27
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.27
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.31
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.28
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.32
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.32
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.29
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.29
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.29
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.33
rrl 1476056 n.2399G>A non_coding_transcript_exon_variant 0.33
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.19
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.17
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.13
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.13
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.14
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.14
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.14
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.14
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.13
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.14
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.15
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.3
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.42
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.42
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.36
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.25
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.25
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.38
rrl 1476583 n.2926G>C non_coding_transcript_exon_variant 0.3
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.33
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.33
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.29
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.43
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.5
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.6
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.6
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.6
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.6
rrl 1476711 n.3054G>A non_coding_transcript_exon_variant 0.5
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.5
rrl 1476719 n.3062C>T non_coding_transcript_exon_variant 0.4
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.4
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.33
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.29
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.25
rrl 1476741 n.3084G>T non_coding_transcript_exon_variant 0.2
rrl 1476743 n.3086A>C non_coding_transcript_exon_variant 0.2
rrl 1476744 n.3087G>A non_coding_transcript_exon_variant 0.2
rrl 1476746 n.3089T>C non_coding_transcript_exon_variant 0.2
rrl 1476747 n.3090C>T non_coding_transcript_exon_variant 0.2
rrl 1476754 n.3097G>A non_coding_transcript_exon_variant 0.22
rrl 1476758 n.3101G>T non_coding_transcript_exon_variant 0.22
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.22
rrl 1476771 n.3114G>A non_coding_transcript_exon_variant 0.22
rpsA 1833694 c.153G>T synonymous_variant 0.12
rpsA 1833697 c.156C>G synonymous_variant 0.12
rpsA 1833703 c.162C>T synonymous_variant 0.12
rpsA 1833709 c.168C>T synonymous_variant 0.12
rpsA 1833734 p.Ala65Ser missense_variant 0.22
rpsA 1833745 c.204G>C synonymous_variant 0.21
rpsA 1833760 c.219C>T synonymous_variant 0.18
rpsA 1833787 c.246C>G synonymous_variant 0.18
rpsA 1833790 c.249T>C synonymous_variant 0.17
rpsA 1833793 c.252C>T synonymous_variant 0.17
rpsA 1833802 c.261A>G synonymous_variant 0.15
rpsA 1833808 c.267G>C synonymous_variant 0.15
rpsA 1833811 c.270G>T synonymous_variant 0.16
rpsA 1833838 c.297G>C synonymous_variant 0.11
rpsA 1833841 c.300C>G synonymous_variant 0.12
rpsA 1833847 c.306C>G synonymous_variant 0.12
rpsA 1833856 c.315A>G synonymous_variant 0.14
rpsA 1833862 c.321G>T synonymous_variant 0.14
rpsA 1834527 p.Arg329Leu missense_variant 0.17
rpsA 1834606 c.1065C>T synonymous_variant 0.2
rpsA 1834609 c.1068T>C synonymous_variant 0.19
rpsA 1834619 c.1078T>C synonymous_variant 0.19
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.2
rpsA 1834633 c.1092A>G synonymous_variant 0.19
rpsA 1834639 c.1098T>C synonymous_variant 0.2
rpsA 1834666 c.1125G>C synonymous_variant 0.21
rpsA 1834667 p.Ala376* stop_gained 0.21
rpsA 1834690 c.1149T>C synonymous_variant 0.27
rpsA 1834700 p.Gln387Ala missense_variant 0.21
rpsA 1834705 c.1164C>G synonymous_variant 0.2
rpsA 1834732 c.1191T>C synonymous_variant 0.15
ndh 2102664 p.Gly127Cys missense_variant 0.22
katG 2154400 p.Arg571Pro missense_variant 0.11
Rv1979c 2222087 p.Ala360Ser missense_variant 0.17
Rv1979c 2222826 p.Phe113Leu missense_variant 0.13
kasA 2518150 c.36C>A synonymous_variant 0.17
ahpC 2726733 p.Gly181Cys missense_variant 0.16
ribD 2987064 p.Glu76* stop_gained 0.14
Rv2752c 3065891 p.Pro101Thr missense_variant 0.12
Rv2752c 3065899 p.Pro98His missense_variant 0.12
ald 3086788 c.-32T>C upstream_gene_variant 0.15
fprA 3474525 p.Leu173Phe missense_variant 0.12
whiB7 3568710 c.-31C>A upstream_gene_variant 0.13
clpC1 4038647 c.2058T>C synonymous_variant 0.1
clpC1 4038671 c.2034T>G synonymous_variant 0.11
clpC1 4038677 p.Pro676Ala missense_variant 0.11
clpC1 4038683 c.2022T>C synonymous_variant 0.13
clpC1 4038704 c.2001T>C synonymous_variant 0.15
clpC1 4038707 c.1998C>G synonymous_variant 0.15
clpC1 4038710 c.1995G>C synonymous_variant 0.15
clpC1 4038713 c.1992T>C synonymous_variant 0.15
clpC1 4039104 p.Arg534Leu missense_variant 0.13
clpC1 4039517 c.1188C>G synonymous_variant 0.11
clpC1 4039553 c.1152C>G synonymous_variant 0.13
clpC1 4039556 c.1149G>C synonymous_variant 0.14
clpC1 4039565 c.1140G>C synonymous_variant 0.13
clpC1 4039570 p.Met379Leu missense_variant 0.13
clpC1 4039571 c.1134G>C synonymous_variant 0.13
clpC1 4039574 p.Ala377Gly missense_variant 0.13
clpC1 4039577 c.1128T>C synonymous_variant 0.12
clpC1 4039586 c.1119G>C synonymous_variant 0.16
clpC1 4039598 c.1107C>T synonymous_variant 0.17
clpC1 4039616 c.1089G>C synonymous_variant 0.11
clpC1 4039622 c.1083C>T synonymous_variant 0.12
clpC1 4039724 c.981A>G synonymous_variant 0.11
clpC1 4039751 c.954A>G synonymous_variant 0.12
clpC1 4039757 c.948A>G synonymous_variant 0.13
clpC1 4039760 c.945T>C synonymous_variant 0.12
clpC1 4039766 c.939T>C synonymous_variant 0.12
clpC1 4039775 c.930G>C synonymous_variant 0.12
clpC1 4039778 c.927A>G synonymous_variant 0.12
clpC1 4039787 c.916_918delTCGinsAGC synonymous_variant 0.12
clpC1 4039817 c.888A>T synonymous_variant 0.12
clpC1 4039820 c.885T>C synonymous_variant 0.13
clpC1 4039823 c.882T>A synonymous_variant 0.14
clpC1 4039831 c.874T>C synonymous_variant 0.12
clpC1 4039832 c.873C>G synonymous_variant 0.12
clpC1 4039850 c.855T>C synonymous_variant 0.13
clpC1 4039865 c.840T>C synonymous_variant 0.1
panD 4043862 c.420G>T stop_lost&splice_region_variant 0.18
embA 4245098 c.1866C>T synonymous_variant 0.15
embB 4247435 c.922C>A synonymous_variant 0.12
aftB 4267183 p.Gly552Ser missense_variant 0.17
aftB 4267257 p.Gly527Val missense_variant 0.15
aftB 4269375 c.-539G>A upstream_gene_variant 0.19
ubiA 4269481 p.Trp118Leu missense_variant 0.14
ethA 4326127 p.Gln449His missense_variant 0.12
whiB6 4338595 c.-75delG upstream_gene_variant 0.31