Rv0701 - p.Cys154Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
7 HR-TB
18 MDR-TB
0 Pre-XDR-TB
506 XDR-TB
141 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 22 |
| lineage2.2.1 | 272 |
| lineage4.8 | 15 |
| lineage3.1.2 | 5 |
| lineage4.4.1.1 | 6 |
| lineage2.2.2 | 73 |
| lineage4.1.2.1 | 8 |
| lineage2.2.1;lineage4 | 4 |
| lineage3 | 21 |
| lineage4.3.3 | 20 |
| lineage4.9 | 136 |
| lineage2.2.1;lineage3 | 6 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage4.7 | 6 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage3;lineage4.8 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.2.1 | 17 |
| lineage4.2.2.2 | 9 |
| lineage4.1.1.3 | 8 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| 3 | |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.2.2 | 3 |
| La1.2.BCG | 2 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage3.1 | 1 |
| lineage4.3.3;lineage4.4.1.1 | 2 |
| lineage2.2.1.1;lineage4.8 | 1 |
| lineage2.2.1.1;lineage3 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.2;lineage4.4.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 672 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4800353 | XDR-TB | lineage2.2.1.1 | in | ERR4800381 | XDR-TB | lineage2.2.1 | in | ERR4796343 | XDR-TB | lineage4.8 | in | ERR4796447 | XDR-TB | lineage2.2.1 | in | ERR4796360 | XDR-TB | lineage2.2.1 | in | ERR4796820 | XDR-TB | lineage2.2.1 | in | ERR4796740 | XDR-TB | lineage2.2.1 | in | ERR4797121 | XDR-TB | lineage3.1.2 | in | ERR4797191 | XDR-TB | lineage2.2.1 | in | ERR4797408 | XDR-TB | lineage2.2.1 | in | ERR4797363 | XDR-TB | lineage2.2.1 | in | ERR4798023 | XDR-TB | lineage2.2.1 | in | ERR4797521 | XDR-TB | lineage2.2.1 | in | ERR13289386 | XDR-TB | lineage4.4.1.1 | None | ERR13288949 | XDR-TB | lineage2.2.2 | None | ERR13289335 | XDR-TB | lineage2.2.2 | None | ERR13289343 | XDR-TB | lineage2.2.2 | None | ERR9992756 | XDR-TB | lineage2.2.2 | None | ERR2515541 | XDR-TB | lineage2.2.2 | za | ERR5917997 | XDR-TB | lineage2.2.2 | za | ERR8975520 | XDR-TB | lineage2.2.2 | None | ERR8975800 | XDR-TB | lineage2.2.2 | None | ERR8975648 | XDR-TB | lineage2.2.1 | None | SRR27757531 | XDR-TB | lineage2.2.1 | None | ERR11044701 | XDR-TB | lineage2.2.1 | None | SRR22048313 | XDR-TB | lineage4.1.2.1 | None | SRR10430380 | XDR-TB | lineage2.2.1 | None | SRR14782040 | XDR-TB | lineage2.2.1 | None | SRR14802029 | XDR-TB | lineage2.2.1;lineage4 | None | SRR25206924 | XDR-TB | lineage2.2.1 | None | SRR28888072 | XDR-TB | lineage2.2.1 | None | SRR29274129 | XDR-TB | lineage4.1.2.1 | None | SRR22175172 | XDR-TB | lineage2.2.1 | None | ERR9806941 | XDR-TB | lineage2.2.2 | None | SRR24256298 | XDR-TB | lineage2.2.1 | None | SRR25827628 | XDR-TB | lineage3 | None | ERR552036 | XDR-TB | lineage4.3.3 | None | ERR13261214 | XDR-TB | lineage2.2.1.1 | None | SRR29093120 | XDR-TB | lineage2.2.2 | None | SRR25827773 | XDR-TB | lineage2.2.1.1 | None | ERR8665989 | XDR-TB | lineage4.3.3 | None | ERR13288790 | XDR-TB | lineage2.2.2 | None | SRR8692778 | Other | lineage4.9 | None | SRR25827781 | XDR-TB | lineage2.2.1 | None | SRR22175264 | XDR-TB | lineage4.1.2.1 | None | ERR13266528 | XDR-TB | lineage2.2.1 | None | ERR4872292 | MDR-TB | lineage2.2.1 | None | SRR18715105 | XDR-TB | lineage2.2.1 | None | SRR25827543 | XDR-TB | lineage2.2.1;lineage3 | None | ERR11081995 | XDR-TB | lineage2.2.1 | None | SRR25827768 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage4 | None | SRR29093955 | XDR-TB | lineage2.2.2 | None | ERR13288847 | XDR-TB | lineage2.2.2 | None | ERR4872047 | XDR-TB | lineage4.7 | None | SRR29385381 | Other | lineage2.2.1 | None | ERR11081809 | XDR-TB | lineage4.3.3 | None | SRR29056058 | XDR-TB | lineage2.2.2 | None | SRR22424782 | XDR-TB | lineage2.2.1 | None | SRR14801603 | XDR-TB | lineage2.2.1 | None | SRR29273921 | XDR-TB | lineage2.2.1 | None | ERR5866095 | XDR-TB | lineage2.2.1 | None | SRR13232556 | XDR-TB | lineage2.2.1 | None | SRR25827617 | XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | SRR29017098 | XDR-TB | lineage3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR9993004 | XDR-TB | lineage2.2.2 | None | SRR22175219 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR8692901 | Other | lineage4.9 | None | SRR28351161 | XDR-TB | lineage2.2.1 | None | ERR11081813 | XDR-TB | lineage2.2.1 | None | SRR27757530 | XDR-TB | lineage2.2.1 | None | SRR25827685 | XDR-TB | lineage2.2.1 | None | SRR24710191 | XDR-TB | lineage2.2.1 | None | SRR25207180 | XDR-TB | lineage2.2.2 | None | SRR25827871 | XDR-TB | lineage2.2.1 | None | ERR13261467 | XDR-TB | lineage2.2.1 | None | ERR13276356 | XDR-TB | lineage2.2.1 | None | ERR13261290 | XDR-TB | lineage4.8 | None | ERR11043615 | XDR-TB | lineage4.3.3 | None | SRR25827313 | XDR-TB | lineage3;lineage4.8 | None | SRR19115684 | XDR-TB | lineage4.1.2.1 | None | SRR19977732 | XDR-TB | lineage2.2.1 | None | SRR29273829 | XDR-TB | lineage4.1.2.1 | None | SRR8692766 | Other | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692823 | Other | lineage4.9 | None | SRR8692838 | Other | lineage4.9 | None | SRR8692844 | Other | lineage4.9 | None | SRR8692845 | Other | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | ERR4872044 | XDR-TB | lineage4.7 | None | SRR8692779 | Other | lineage4.9 | None | SRR8692805 | Other | lineage2.2;lineage4.9 | None | SRR8692809 | Other | lineage4.9 | None | SRR8692815 | Other | lineage4.9 | None | SRR8692818 | Other | lineage4.9 | None | SRR25207067 | XDR-TB | lineage2.2.1.1 | None | SRR29539816 | XDR-TB | lineage2.2.1 | None | SRR10379953 | XDR-TB | lineage4.2.1 | None | ERR13267063 | XDR-TB | lineage4.8 | None | SRR29289379 | XDR-TB | lineage3 | None | SRR29289390 | XDR-TB | lineage4.2.2.2 | None | SRR29289405 | XDR-TB | lineage3 | None | SRR8692759 | Other | lineage4.9 | None | ERR13262145 | XDR-TB | lineage2.2.1 | None | SRR8692798 | Other | lineage4.9 | None | SRR29289126 | XDR-TB | lineage3 | None | SRR8692899 | Other | lineage4.9 | None | SRR29289135 | XDR-TB | lineage4.1.1.3 | None | SRR29289173 | XDR-TB | lineage3 | None | SRR29056279 | XDR-TB | lineage2.2.2 | None | SRR25827624 | XDR-TB | lineage2.2.1;lineage4 | None | SRR19977736 | XDR-TB | lineage2.2.1 | None | SRR29289389 | XDR-TB | lineage4.2.2.2 | None | SRR29539812 | XDR-TB | lineage2.2.1 | None | ERR4797884 | XDR-TB | lineage2.2.1;lineage3.1.2.1 | in | ERR4553935 | HR-TB | None | ERR13261236 | XDR-TB | lineage2.2.1 | None | ERR4797406 | XDR-TB | lineage2.2.1 | in | ERR13259984 | XDR-TB | lineage4.4.2 | None | ERR13266661 | XDR-TB | lineage2.2.1 | None | SRR25827542 | XDR-TB | lineage4.4.1.2 | None | ERR4797808 | XDR-TB | lineage2.2.1 | in | SRR29274748 | XDR-TB | lineage2.2.1 | None | ERR11044250 | XDR-TB | lineage2.2.1 | None | ERR13276389 | XDR-TB | lineage4.3.3 | None | SRR29274213 | XDR-TB | lineage2.2.1 | None | SRR8692832 | Other | lineage4.9 | None | SRR25827329 | XDR-TB | lineage2.2.1 | None | ERR13289407 | XDR-TB | lineage2.2.2 | None | SRR22175247 | XDR-TB | lineage2.2.1 | None | SRR8692839 | Other | lineage4.9 | None | SRR8692797 | Other | lineage4.9 | None | SRR8692862 | Other | lineage4.9 | None | SRR26397816 | Other | lineage4.9 | None | SRR8692870 | Other | lineage4.9 | None | SRR8692801 | Other | lineage4.9 | None | SRR8692819 | Other | lineage4.9 | None | SRR8692774 | Other | lineage4.9 | None | ERR4800599 | XDR-TB | lineage2.2.1 | in | SRR8692773 | Other | lineage4.9 | None | SRR8692761 | Other | lineage4.9 | None | SRR8692900 | Other | lineage4.9 | None | SRR8692836 | Other | lineage4.9 | None | ERR4872042 | XDR-TB | lineage4.7 | None | SRR8692910 | Other | lineage4.9 | None | SRR29385511 | XDR-TB | lineage2.2.1 | None | SRR8692909 | Other | lineage4.9 | None | SRR8692829 | Other | lineage4.9 | None | SRR8692762 | Other | lineage4.9 | None | SRR8692873 | Other | lineage4.9 | None | SRR8692760 | Other | lineage4.9 | None | SRR8692794 | Other | lineage4.9 | None | SRR21747026 | Other | lineage4.9 | None | SRR8692777 | Other | lineage4.9 | None | SRR8692789 | Other | lineage4.9 | None | SRR8692804 | Other | lineage4.9 | None | SRR8692833 | Other | lineage4.9 | None | SRR8692902 | Other | lineage4.9 | None | SRR8692875 | Other | lineage4.9 | None | SRR21747037 | Other | lineage4.9 | None | SRR8692765 | Other | lineage4.9 | None | ERR9992671 | XDR-TB | lineage2.2.1 | None | ERR9992662 | XDR-TB | lineage2.2.1 | None | ERR9993146 | XDR-TB | lineage4.1.1.3 | None | ERR13286163 | XDR-TB | lineage1.2.2.2 | None | SRR25827710 | XDR-TB | lineage2.2.1 | None | SRR21747024 | XDR-TB | lineage2.2.1 | None | SRR27069367 | XDR-TB | lineage2.2.1 | None | SRR28888076 | XDR-TB | lineage2.2.1 | None | ERR4822324 | XDR-TB | lineage4.3.3 | de | ERR4822599 | XDR-TB | lineage4.3.3 | de | ERR4822600 | XDR-TB | lineage4.3.3 | de | ERR4831262 | XDR-TB | lineage2.2.1 | de | ERR4831404 | XDR-TB | lineage2.2.1 | de | SRR24255931 | XDR-TB | lineage2.2.1 | None | ERR8975764 | XDR-TB | lineage4.4.1.1 | None | ERR4809320 | XDR-TB | lineage2.2.2 | za | ERR4808903 | XDR-TB | lineage2.2.2 | za | ERR4808856 | XDR-TB | lineage2.2.2 | za | ERR5918046 | XDR-TB | lineage4.1.1.3 | za | SRR19977735 | XDR-TB | lineage2.2.1 | None | SRR25827686 | XDR-TB | lineage2.2.1 | None | ERR9992982 | MDR-TB | lineage2.2.1 | None | ERR10112856 | XDR-TB | lineage2.2.2 | None | SRR13243565 | XDR-TB | lineage2.2.1 | None | SRR28044688 | XDR-TB | lineage3 | None | SRR6930897 | XDR-TB | La1.2.BCG | None | SRR29093161 | XDR-TB | lineage2.2.2 | None | SRR14782700 | XDR-TB | lineage4.2.1 | None | SRR23938696 | XDR-TB | lineage2.2.1 | None | SRR29385336 | XDR-TB | lineage2.2.1 | None | ERR4872046 | XDR-TB | lineage4.7 | None | SRR29093121 | MDR-TB | lineage2.2.1 | None | ERR13266930 | XDR-TB | lineage2.2.1 | None | ERR13284000 | XDR-TB | lineage2.2.1 | None | ERR8975656 | XDR-TB | lineage2.2.2 | None | ERR4796359 | XDR-TB | lineage3 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | ERR11068844 | XDR-TB | lineage2.2.1 | None | SRR28498452 | XDR-TB | lineage4.2.1 | None | SRR28888061 | XDR-TB | lineage2.2.1 | None | ERR9993050 | XDR-TB | lineage2.2.2 | None | SRR29539441 | XDR-TB | lineage2.2.1 | None | ERR13276236 | XDR-TB | lineage2.2.1 | None | SRR29273864 | XDR-TB | lineage2.2.1 | None | SRR14807667 | XDR-TB | lineage2.2.1 | None | ERR13266130 | XDR-TB | lineage2.2.1 | None | ERR11489006 | MDR-TB | lineage4.4.1.1 | None | SRR14807508 | MDR-TB | lineage2.2.1 | None | SRR29273826 | XDR-TB | lineage2.2.1 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | SRR25207304 | XDR-TB | lineage2.2.1 | None | SRR19977731 | XDR-TB | lineage2.2.1 | None | SRR8692780 | Other | lineage4.9 | None | ERR13266820 | XDR-TB | lineage3 | None | ERR13266490 | XDR-TB | lineage2.2.1 | None | ERR13266571 | XDR-TB | lineage2.2.1 | None | SRR16088577 | MDR-TB | lineage2.2.1 | None | ERR13267045 | XDR-TB | lineage4.1.1.3 | None | SRR25827364 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR25827362 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827440 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827669 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827816 | XDR-TB | lineage3.1.2 | None | SRR8692888 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | ERR13284661 | XDR-TB | lineage2.2.1 | None | SRR19977734 | XDR-TB | lineage2.2.1 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692890 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692907 | Other | lineage4.9 | None | SRR8692904 | Other | lineage4.9 | None | ERR13261239 | XDR-TB | lineage3.1 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR25827353 | XDR-TB | lineage3.1.2 | None | SRR28351465 | XDR-TB | lineage2.2.1 | None | SRR8692816 | Other | lineage4.9 | None | SRR8692814 | Other | lineage4.9 | None | SRR8692837 | Other | lineage4.9 | None | SRR8692874 | Other | lineage4.9 | None | SRR8692880 | Other | lineage4.9 | None | SRR8692883 | Other | lineage4.9 | None | SRR8692813 | Other | lineage4.9 | None | SRR8692810 | Other | lineage4.9 | None | SRR8692856 | Other | lineage4.9 | None | SRR8692866 | Other | lineage4.9 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692808 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692886 | Other | lineage4.9 | None | SRR8692908 | Other | lineage4.9 | None | ERR13261174 | XDR-TB | lineage4.2.2.2 | None | SRR29539852 | XDR-TB | lineage2.2.1 | None | ERR8025586 | XDR-TB | lineage2.2.2 | None | SRR24710017 | XDR-TB | lineage2.2.1 | None | ERR13267513 | XDR-TB | lineage4.3.3 | None | SRR29289204 | XDR-TB | lineage4.2.2.2 | None | ERR13276165 | XDR-TB | lineage2.2.1 | None | ERR13266034 | Other | lineage4.2.1 | None | SRR29385257 | HR-TB | lineage2.2.1 | None | SRR29289127 | XDR-TB | lineage3 | None | ERR13266560 | XDR-TB | lineage2.2.1 | None | ERR4972534 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | ERR4796424 | XDR-TB | lineage2.2.1 | in | SRR29539239 | XDR-TB | lineage2.2.1 | None | ERR4796503 | XDR-TB | lineage3 | in | ERR4798749 | XDR-TB | lineage2.2.1 | in | ERR4797720 | XDR-TB | lineage3 | in | SRR10379908 | XDR-TB | lineage4.2.1 | None | ERR13261120 | XDR-TB | lineage4.1.1.3 | None | ERR4798738 | XDR-TB | lineage2.2.1 | in | ERR4799690 | XDR-TB | lineage2.2.1 | in | ERR4797703 | MDR-TB | lineage2.2.1;lineage3 | in | ERR4800290 | XDR-TB | lineage2.2.1.1;lineage4.8 | in | ERR4809077 | XDR-TB | lineage2.2.2 | za | SRR29055862 | XDR-TB | lineage2.2.2 | None | ERR4799584 | XDR-TB | lineage2.2.1 | in | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4799911 | XDR-TB | lineage2.2.1 | in | SRR8692898 | Other | lineage4.9 | None | ERR4831258 | XDR-TB | lineage2.2.1 | de | ERR13267049 | XDR-TB | lineage2.2.1 | None | ERR7975629 | XDR-TB | lineage2.2.1 | None | SRR29273787 | XDR-TB | lineage4.8 | None | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR4872039 | XDR-TB | lineage4.7 | None | ERR4798778 | XDR-TB | lineage2.2.1 | in | SRR25827366 | XDR-TB | lineage2.2.1 | None | ERR4799523 | XDR-TB | lineage2.2.1 | in | SRR8692770 | Other | lineage4.9 | None | SRR8692764 | Other | lineage4.9 | None | ERR13267005 | XDR-TB | lineage2.2.1 | None | SRR29681435 | XDR-TB | lineage2.2.1 | None | SRR8692793 | Other | lineage4.9 | None | SRR8692857 | Other | lineage4.9 | None | SRR23082913 | Other | lineage4.9 | None | SRR8692795 | Other | lineage4.9 | None | SRR8692891 | Other | lineage4.9 | None | SRR8692758 | Other | lineage4.9 | None | SRR8692876 | Other | lineage4.9 | None | SRR8692817 | Other | lineage4.9 | None | SRR23310906 | XDR-TB | lineage2.2.1 | None | SRR25827402 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | SRR8692784 | Other | lineage4.9 | None | SRR28044767 | XDR-TB | lineage3.1.2 | None | SRR8692796 | Other | lineage4.9 | None | SRR27069388 | XDR-TB | lineage2.2.1.1 | None | SRR8692802 | Other | lineage4.9 | None | ERR551975 | Other | lineage4.9 | None | SRR8692820 | Other | lineage4.9 | None | ERR13258590 | Other | lineage4.9 | None | SRR8692906 | Other | lineage4.9 | None | SRR8692768 | Other | lineage4.9 | None | SRR8692860 | Other | lineage4.9 | None | SRR8692787 | Other | lineage4.9 | None | SRR8692803 | Other | lineage4.9 | None | SRR8692763 | Other | lineage4.9 | None | SRR8692806 | Other | lineage4.9 | None | SRR8692788 | Other | lineage4.9 | None | ERR8665880 | XDR-TB | lineage2.2.1 | None | SRR24709933 | XDR-TB | lineage2.2.1 | None | SRR10303328 | XDR-TB | lineage2.2.1 | None | SRR19977730 | XDR-TB | lineage2.2.1 | None | SRR28351388 | XDR-TB | lineage4.2.1 | None | SRR28351374 | XDR-TB | lineage2.2.1 | None | SRR24710194 | XDR-TB | lineage2.2.1 | None | SRR28706638 | XDR-TB | lineage2.2.1 | None | SRR28351318 | XDR-TB | lineage4.2.1 | None | ERR13289366 | XDR-TB | lineage2.2.1 | None | ERR13289358 | XDR-TB | lineage2.2.2 | None | ERR9992957 | XDR-TB | lineage4.3.3 | None | ERR13289360 | XDR-TB | lineage2.2.2 | None | ERR9993089 | XDR-TB | lineage2.2.2 | None | ERR13289350 | XDR-TB | lineage2.2.2 | None | ERR9993186 | XDR-TB | lineage2.2.1 | None | ERR13289380 | XDR-TB | lineage2.2.2 | None | ERR9992686 | XDR-TB | lineage2.2.2 | None | ERR9992685 | XDR-TB | lineage2.2.2 | None | ERR13286153 | XDR-TB | lineage2.2.2 | None | ERR9992967 | XDR-TB | lineage2.2.2 | None | ERR9993202 | XDR-TB | lineage2.2.1.1 | None | ERR9992749 | XDR-TB | lineage4.4.1.1 | None | ERR9993211 | XDR-TB | lineage2.2.1 | None | ERR4872048 | XDR-TB | lineage4.7 | None | ERR10748141 | XDR-TB | lineage2.2.2 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | SRR25827601 | XDR-TB | lineage2.2.1.1 | None | ERR4808866 | XDR-TB | lineage2.2.2 | za | SRR8692792 | Other | lineage4.9 | None | SRR8692790 | Other | lineage4 | None | SRR9738479 | XDR-TB | lineage4.1.2.1 | None | ERR11044658 | XDR-TB | lineage2.2.1 | None | SRR28351194 | HR-TB | lineage2.2.1 | None | SRR23310932 | XDR-TB | lineage4.2.1 | None | SRR8692854 | Other | lineage4.9 | None | SRR25827834 | XDR-TB | lineage2.2.1 | None | ERR4276886 | XDR-TB | lineage2.2.1 | None | SRR8692781 | Other | lineage4.9 | None | SRR8692767 | Other | lineage4.9 | None | ERR4831565 | XDR-TB | lineage2.2.2 | None | SRR29273872 | XDR-TB | lineage2.2.1 | None | ERR10112907 | XDR-TB | lineage2.2.2 | None | ERR13266761 | XDR-TB | lineage2.2.1 | None | SRR24710213 | XDR-TB | lineage2.2.1 | None | SRR29017184 | XDR-TB | lineage3 | None | ERR13266033 | Other | lineage4.2.1 | None | SRR13232717 | XDR-TB | lineage2.2.1 | None | ERR9993005 | XDR-TB | lineage2.2.2 | None | SRR29273768 | XDR-TB | lineage4.8 | None | ERR4276867 | XDR-TB | lineage2.2.1 | None | ERR13284157 | XDR-TB | lineage2.2.1 | None | SRR29093123 | XDR-TB | lineage2.2.2 | None | SRR8692841 | Other | lineage4.9 | None | ERR10748132 | XDR-TB | lineage4.4.1.1 | None | ERR4276865 | XDR-TB | lineage2.2.1 | None | SRR10869075 | XDR-TB | lineage2.2.2 | None | ERR4276868 | XDR-TB | lineage2.2.1 | None | ERR13266044 | XDR-TB | lineage3.1.2.1 | None | ERR11081152 | XDR-TB | lineage4.3.3 | None | ERR7975630 | MDR-TB | lineage2.2.1 | None | ERR13267015 | XDR-TB | lineage2.2.1 | None | SRR25827394 | XDR-TB | lineage2.2.1;lineage3;lineage4.9 | None | SRR8692887 | Other | None | ERR13267514 | XDR-TB | lineage4.3.3 | None | SRR19977729 | XDR-TB | lineage2.2.1 | None | SRR29093947 | XDR-TB | lineage2.2.2 | None | ERR13267114 | XDR-TB | lineage2.2.1 | None | SRR24710190 | XDR-TB | lineage2.2.1 | None | SRR25827482 | XDR-TB | lineage2.2.1 | None | SRR29538871 | XDR-TB | lineage2.2.1 | None | SRR29681451 | XDR-TB | lineage2.2.1 | None | ERR13266114 | XDR-TB | lineage2.2.1.1 | None | SRR29914427 | XDR-TB | lineage2.2.1 | None | ERR4872275 | XDR-TB | lineage4.2.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR13260081 | XDR-TB | La1.2.BCG | None | ERR13266429 | XDR-TB | lineage2.2.1 | None | SRR29093122 | XDR-TB | lineage2.2.2 | None | SRR14801708 | XDR-TB | lineage4.2.1 | None | SRR28888050 | XDR-TB | lineage2.2.1 | None | ERR13276394 | XDR-TB | lineage2.2.1 | None | ERR4800626 | XDR-TB | lineage2.2.1 | None | ERR11798720 | XDR-TB | lineage4.2.1 | None | SRR22175201 | XDR-TB | lineage2.2.1.1 | None | SRR29539820 | XDR-TB | lineage2.2.1 | None | ERR13288956 | XDR-TB | lineage2.2.2 | None | SRR8692842 | Other | lineage4.9 | None | SRR23310868 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13262031 | XDR-TB | lineage2.2.1 | None | ERR13260495 | XDR-TB | lineage2.2.2 | None | SRR14807469 | XDR-TB | lineage2.2.1 | None | SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None | SRR23938626 | XDR-TB | lineage2.2.1 | None | SRR22873604 | XDR-TB | lineage2.2.1 | None | SRR16088528 | XDR-TB | lineage2.2.1 | None | SRR29538998 | XDR-TB | lineage2.2.1 | None | SRR29274188 | XDR-TB | lineage2.2.1 | None | ERR13276181 | XDR-TB | lineage2.2.1 | None | SRR16087902 | XDR-TB | lineage2.2.1 | None | SRR18003048 | XDR-TB | lineage2.2.1 | None | SRR28706626 | XDR-TB | lineage2.2.1 | None | ERR13266947 | XDR-TB | lineage2.2.1 | None | SRR22175226 | XDR-TB | lineage4.2.2.2 | None | SRR29093916 | XDR-TB | lineage2.2.2 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692843 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692846 | Other | lineage4.9 | None | SRR8692892 | Other | lineage4.9 | None | SRR14807683 | XDR-TB | lineage2.2.1 | None | ERR13266441 | XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | SRR8692825 | Other | lineage4.9 | None | ERR13288885 | XDR-TB | lineage2.2.2 | None | ERR13276291 | XDR-TB | lineage4.3.3 | None | ERR13266780 | XDR-TB | lineage4.8 | None | SRR29289403 | XDR-TB | lineage4.2.2.2 | None | ERR4872325 | XDR-TB | lineage2.2.1 | None | SRR24709976 | XDR-TB | lineage2.2.1 | None | SRR25827357 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3 | None | ERR9992981 | XDR-TB | lineage2.2.2 | None | SRR5153910 | XDR-TB | lineage4.2.1 | None | SRR14088365 | XDR-TB | lineage3 | None | SRR29289412 | XDR-TB | lineage3 | None | SRR29289429 | XDR-TB | lineage4.2.2.2 | None | SRR29289233 | XDR-TB | lineage3 | None | SRR14807627 | XDR-TB | lineage2.2.1 | None | ERR13266461 | XDR-TB | lineage4.1.2.1 | None | ERR4798827 | XDR-TB | lineage2.2.1 | in | ERR4799107 | XDR-TB | lineage4.8 | in | ERR4799619 | XDR-TB | lineage2.2.1 | in | ERR4799888 | XDR-TB | lineage2.2.1;lineage3 | in | ERR4797849 | XDR-TB | lineage2.2.1.1 | in | ERR4822285 | XDR-TB | lineage2.2.1 | None | SRR29093128 | XDR-TB | lineage2.2.2 | None | ERR13288892 | XDR-TB | lineage2.2.2 | None | ERR4798017 | XDR-TB | lineage2.2.1 | in | ERR11774898 | XDR-TB | lineage2.2.1 | None | ERR13266647 | XDR-TB | lineage4.1.1.3 | None | ERR13288830 | XDR-TB | lineage4.1.1.3 | None | SRR8692769 | Other | lineage4.9 | None | ERR4800291 | XDR-TB | lineage2.2.1 | in | SRR25827619 | XDR-TB | lineage2.2.1 | None | SRR8692884 | Other | lineage4.9 | None | SRR8692896 | Other | lineage4.9 | None | SRR8692848 | Other | lineage4.9 | None | SRR8692827 | Other | lineage4.9 | None | SRR8692830 | Other | lineage4.9 | None | ERR4799980 | XDR-TB | lineage2.2.1 | None | SRR8692756 | Other | lineage4.9 | None | SRR8692821 | Other | lineage4.9 | None | SRR8692869 | Other | lineage4.9 | None | SRR8692903 | Other | lineage4.9 | None | SRR8692895 | Other | lineage4.9 | None | ERR14047576 | XDR-TB | lineage4.9 | None | ERR14047578 | XDR-TB | lineage4.9 | None | ERR14694010 | XDR-TB | lineage4.9 | None | ERR14748650 | XDR-TB | lineage4.9 | None | ERR8975789 | XDR-TB | lineage2.2.2;lineage4.9 | None | ERR8025756 | XDR-TB | lineage2.2.2 | None | SRR13232559 | MDR-TB | lineage2.2.1 | None | SRR28351424 | XDR-TB | lineage2.2.1 | None | ERR4553961 | HR-TB | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | SRR28045507 | XDR-TB | lineage2.2.1 | None | SRR28888046 | XDR-TB | lineage2.2.1 | None | SRR28351582 | XDR-TB | lineage3 | None | SRR28351212 | XDR-TB | lineage2.2.1.1 | None | SRR28351163 | XDR-TB | lineage2.2.1 | None | ERR4831102 | XDR-TB | lineage2.2.1 | None | SRR8692893 | Other | lineage4.9 | None | ERR8665617 | XDR-TB | lineage2.2.1 | None | ERR8665988 | XDR-TB | lineage2.2.1 | None | ERR8975030 | XDR-TB | lineage2.2.2 | None | SRR14801831 | XDR-TB | lineage2.2.1 | None | SRR23310911 | XDR-TB | lineage2.2.1 | None | ERR8975821 | XDR-TB | lineage4.3.3 | None | ERR4800347 | XDR-TB | lineage2.2.1 | None | ERR8975982 | XDR-TB | lineage4.3.3 | None | ERR9993244 | XDR-TB | lineage2.2.2 | None | ERR2515224 | XDR-TB | lineage2.2.1 | za | SRR5341316 | XDR-TB | lineage2.2.1 | in | ERR11043735 | XDR-TB | lineage2.2.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | SRR25827510 | XDR-TB | lineage2.2.1.2 | None | SRR28888049 | XDR-TB | lineage2.2.1 | None | ERR11773796 | XDR-TB | lineage2.2.1 | None | ERR11774904 | XDR-TB | lineage2.2.1 | None | SRR29273736 | XDR-TB | lineage4.8 | None | SRR29056281 | XDR-TB | lineage2.2.2 | None | ERR13262084 | XDR-TB | lineage2.2.1 | None | ERR5866493 | XDR-TB | lineage2.2.1 | None | SRR29385280 | XDR-TB | lineage2.2.1 | None | SRR28351484 | XDR-TB | lineage2.2.1 | None | ERR9993076 | XDR-TB | lineage2.2.2 | None | SRR22175225 | XDR-TB | lineage2.2.1 | None | SRR28351573 | XDR-TB | lineage2.2.1 | None | SRR23310972 | XDR-TB | lineage2.2.1 | None | ERR11067627 | XDR-TB | lineage2.2.1 | None | ERR10748106 | XDR-TB | lineage2.2.1 | None | ERR11043952 | XDR-TB | lineage2.2.1 | None | SRR22175200 | XDR-TB | lineage2.2.1.1 | None | SRR25827799 | XDR-TB | lineage4.8 | None | SRR28045558 | XDR-TB | lineage2.2.1 | None | SRR28044397 | XDR-TB | lineage3 | None | SRR28434995 | XDR-TB | lineage2.2.1 | None | SRR28888051 | XDR-TB | lineage4.3.3 | None | SRR14807579 | XDR-TB | lineage2.2.1 | None | SRR28044392 | XDR-TB | lineage2.2.1 | None | ERR8665615 | XDR-TB | lineage2.2.1 | None | SRR28706466 | XDR-TB | lineage2.2.1 | None | ERR9992948 | XDR-TB | lineage2.2.2 | None | ERR9993196 | XDR-TB | lineage2.2.2 | None | SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | SRR25827438 | XDR-TB | lineage4.8 | None | SRR25827522 | XDR-TB | lineage2.2.1 | None | SRR25827749 | XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4797753 | XDR-TB | lineage3 | in | ERR4797965 | XDR-TB | lineage2.2.1 | in | ERR4797902 | XDR-TB | lineage2.2.1.1 | in | ERR4798473 | XDR-TB | lineage2.2.1 | in | ERR4799790 | XDR-TB | lineage2.2.1 | in | ERR4798686 | XDR-TB | lineage3.1.2.1 | in | ERR4798723 | XDR-TB | lineage2.2.1 | in | ERR4799841 | MDR-TB | lineage2.2.1 | in | ERR4799348 | XDR-TB | lineage2.2.1 | in | ERR4799214 | XDR-TB | lineage2.2.1 | in | ERR4799529 | XDR-TB | lineage2.2.1 | in | ERR4799622 | XDR-TB | lineage2.2.1 | in | ERR4799961 | XDR-TB | lineage4.8 | in | ERR4800476 | XDR-TB | lineage2.2.1.1 | in | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | SRR28646095 | XDR-TB | lineage2.2.1 | None | SRR28044666 | XDR-TB | lineage2.2.1 | None | SRR28888054 | XDR-TB | lineage2.2.1 | None | SRR28498382 | XDR-TB | lineage2.2.1 | None | SRR28498365 | XDR-TB | lineage4.2.1 | None | SRR28888073 | XDR-TB | lineage2.2.1 | None | SRR28351634 | XDR-TB | lineage4.2.1 | None | ERR11774902 | XDR-TB | lineage2.2.1 | None | SRR28888074 | XDR-TB | lineage2.2.1 | None | SRR27757529 | XDR-TB | lineage2.2.1 | None | SRR28888052 | XDR-TB | lineage2.2.1 | None | SRR28498697 | XDR-TB | lineage4.2.1 | None | ERR8665616 | XDR-TB | lineage2.2.1 | None | SRR25827530 | XDR-TB | lineage2.2.1;lineage4 | None | SRR25827641 | XDR-TB | lineage2.2.1;lineage4 | None | SRR25827727 | MDR-TB | lineage2.2.1 | None | SRR25827664 | XDR-TB | lineage2.2.1 | None | ERR2677416 | XDR-TB | lineage4.3.3 | de | SRR5341353 | XDR-TB | lineage2.2.1 | in | SRR15723151 | XDR-TB | lineage2.2.1 | None | ERR8025693 | XDR-TB | lineage2.2.2 | None | ERR11774910 | XDR-TB | lineage2.2.1 | None | ERR4872312 | MDR-TB | lineage2.2.1 | None | ERR13286165 | XDR-TB | lineage2.2.2 | None | SRR27757527 | XDR-TB | lineage2.2.1 | None | SRR29093731 | XDR-TB | lineage2.2.2 | None | ERR13266575 | XDR-TB | lineage2.2.1.1 | None | SRR12062505 | XDR-TB | lineage2.2.1 | None | SRR23311027 | XDR-TB | lineage2.2.1 | None | SRR13232400 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR8692865 | Other | lineage4.9 | None | SRR29093366 | XDR-TB | lineage2.2.2;lineage4.4.2 | None | ERR13266605 | XDR-TB | lineage4.8 | None | ERR4972575 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR22175215 | XDR-TB | lineage2.2.1 | None | ERR4972536 | HR-TB | lineage4.3.2 | None | SRR8692864 | Other | lineage4.9 | None | SRR25827325 | XDR-TB | lineage2.2.1;lineage4.9 | None | SRR28888058 | XDR-TB | lineage2.2.1 | None | ERR9993069 | XDR-TB | lineage2.2.2 | None | ERR9992723 | XDR-TB | lineage2.2.2 | None | SRR8692783 | Other | lineage4.9 | None | SRR8692831 | Other | lineage4.9 | None | ERR3639751 | XDR-TB | lineage2.2.1 | None | ERR4796479 | XDR-TB | lineage2.2.1 | in | SRR28351440 | XDR-TB | lineage3 | None | ERR4796896 | XDR-TB | lineage4.8 | in | ERR4797865 | XDR-TB | lineage2.2.1.1 | in | ERR4798281 | XDR-TB | lineage2.2.1 | in | ERR4798843 | XDR-TB | lineage4.2.2.2 | in | ERR4798685 | XDR-TB | lineage3.1.2 | in | ERR4799027 | HR-TB | lineage2.2.1 | in | ERR4799267 | XDR-TB | lineage2.2.1.1 | in | ERR4799245 | XDR-TB | lineage2.2.1.1 | in | ERR4799719 | XDR-TB | lineage2.2.1 | in | ERR4799634 | XDR-TB | lineage2.2.1.1 | in | ERR4799670 | XDR-TB | lineage2.2.1 | in | SRR8692786 | Other | lineage4.9 | None | SRR8692847 | Other | lineage4.9 | None | SRR8692834 | Other | lineage4.9 | None | SRR8692772 | Other | lineage4.9 | None | ERR4872301 | MDR-TB | lineage2.2.1 | None | ERR552237 | XDR-TB | lineage2.2.1 | None | SRR28646090 | XDR-TB | lineage4.2.1 | None | SRR28045946 | XDR-TB | lineage2.2.1 | None | SRR28045492 | XDR-TB | lineage1.2.2.2 | None | SRR8692782 | Other | lineage4.9 | None | ERR11774901 | XDR-TB | lineage2.2.1 | None | SRR28498559 | XDR-TB | lineage2.2.1 | None | SRR28888057 | XDR-TB | lineage2.2.1 | None | SRR28044935 | XDR-TB | lineage2.2.1 | None | ERR4831253 | XDR-TB | lineage2.2.1 | de | ERR8665874 | XDR-TB | lineage2.2.1 | None | SRR27757532 | XDR-TB | lineage2.2.1 | None | ERR8975767 | XDR-TB | lineage2.2.2 | None | SRR19977733 | XDR-TB | lineage2.2.1 | None | SRR14782507 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR25827367 | MDR-TB | lineage2.2.1.1 | None | ERR13261620 | XDR-TB | lineage4.1.2 | None | SRR25207068 | XDR-TB | lineage2.2.1.1 | None | ERR12916914 | XDR-TB | lineage2.2.1 | None | ERR13266572 | XDR-TB | lineage2.2.1 | None | ERR4872297 | XDR-TB | lineage4.3.3 | None | SRR25827582 | XDR-TB | lineage3;lineage4.8 | None | ERR550916 | XDR-TB | lineage2.2.1 | None | ERR8025570 | XDR-TB | lineage2.2.2 | None | ERR8025764 | XDR-TB | lineage2.2.2 | None | ERR13276320 | XDR-TB | lineage4.3.3 | None | SRR25827850 | XDR-TB | lineage2.2.1.1;lineage3 | None | SRR14807610 | XDR-TB | lineage2.2.1 | None | ERR4872331 | XDR-TB | lineage2.2.1 | None | SRR28351357 | XDR-TB | lineage2.2.1 | None | ERR13261153 | XDR-TB | lineage4.8 | None | SRR16168839 | XDR-TB | lineage2.2.1 | None | SRR16088563 | XDR-TB | lineage2.2.1 | None | SRR22175220 | XDR-TB | lineage2.2.1 | None | SRR28888053 | MDR-TB | lineage4.3.3 | None | ERR4822334 | XDR-TB | lineage2.2.1 | None | SRR26397804 | Other | lineage4.1.1.3 | None | ERR4872295 | XDR-TB | lineage2.2.1 | None | SRR8692835 | Other | lineage4.9 | None | SRR3105770 | XDR-TB | lineage3 | None | SRR28706698 | XDR-TB | lineage2.2.1 | None | SRR8692840 | Other | lineage4.9 | None | SRR29274155 | XDR-TB | lineage4.1.2.1 | None | ERR9993077 | XDR-TB | lineage2.2.2 | None | ERR13289348 | XDR-TB | lineage2.2.2 | None | ERR13289368 | XDR-TB | lineage2.2.2 | None | ERR13289379 | XDR-TB | lineage2.2.2 | None | ERR9992611 | XDR-TB | lineage1.2.2.2 | None | ERR4796404 | XDR-TB | lineage2.2.1 | in | ERR4797457 | XDR-TB | lineage4.8 | in | SRR13232608 | XDR-TB | lineage2.2.1 | None | ERR4799206 | XDR-TB | lineage2.2.1 | in | ERR4799252 | HR-TB | lineage2.2.1 | in | ERR4799681 | XDR-TB | lineage2.2.1 | in |
|---|
