Run ID: SRR8692825
Sample name:
Date: 13-08-2023 21:01:34
Number of reads: NA
Percentage reads mapped: NA
Strain: lineage4.9
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 0.97 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 0.96 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rplC | 801268 | p.Cys154Arg | missense_variant | 0.44 | linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 5908 | c.669C>A | synonymous_variant | 0.17 |
gyrB | 6115 | c.876A>G | synonymous_variant | 0.16 |
gyrB | 6127 | c.888G>C | synonymous_variant | 0.26 |
gyrB | 6130 | c.891T>C | synonymous_variant | 0.26 |
gyrB | 6133 | c.894G>C | synonymous_variant | 0.28 |
gyrB | 6178 | c.939C>T | synonymous_variant | 0.36 |
gyrB | 6196 | c.957C>G | synonymous_variant | 0.38 |
gyrB | 6202 | c.963C>G | synonymous_variant | 0.38 |
gyrB | 6203 | p.Ser322Ala | missense_variant | 0.36 |
gyrB | 6214 | c.975G>C | synonymous_variant | 0.36 |
gyrB | 6215 | p.Ser326Thr | missense_variant | 0.36 |
gyrB | 6223 | c.984G>C | synonymous_variant | 0.33 |
gyrB | 6242 | p.Arg335Lys | missense_variant | 0.27 |
gyrB | 6250 | c.1011A>G | synonymous_variant | 0.27 |
gyrB | 6253 | c.1014G>C | synonymous_variant | 0.25 |
gyrB | 6265 | c.1026C>T | synonymous_variant | 0.14 |
gyrB | 6268 | c.1029C>G | synonymous_variant | 0.14 |
gyrA | 6580 | c.-722C>T | upstream_gene_variant | 0.25 |
gyrA | 6727 | c.-575G>T | upstream_gene_variant | 0.22 |
gyrA | 6904 | c.-398C>A | upstream_gene_variant | 0.2 |
gyrB | 6930 | p.Ala564Glu | missense_variant | 0.15 |
gyrB | 7005 | p.Gly589Asp | missense_variant | 0.17 |
gyrA | 7078 | c.-224A>G | upstream_gene_variant | 0.14 |
gyrA | 7081 | c.-221T>C | upstream_gene_variant | 0.15 |
gyrA | 7084 | c.-218A>G | upstream_gene_variant | 0.15 |
gyrA | 7093 | c.-209T>C | upstream_gene_variant | 0.15 |
gyrA | 7100 | c.-202T>C | upstream_gene_variant | 0.12 |
gyrA | 7275 | c.-27C>A | upstream_gene_variant | 0.15 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 0.44 |
gyrA | 7965 | p.Arg222Trp | missense_variant | 0.14 |
gyrA | 8085 | p.Asp262Tyr | missense_variant | 0.2 |
gyrA | 8306 | c.1005C>A | synonymous_variant | 0.29 |
gyrA | 8624 | c.1323G>T | synonymous_variant | 0.25 |
gyrA | 9080 | c.1779G>T | synonymous_variant | 0.25 |
gyrA | 9086 | c.1785C>T | synonymous_variant | 0.25 |
gyrA | 9200 | c.1899A>G | synonymous_variant | 0.14 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 0.17 |
gyrA | 9596 | c.2295G>C | synonymous_variant | 0.15 |
fgd1 | 491437 | p.Asp219Tyr | missense_variant | 0.18 |
fgd1 | 491488 | p.Asp236Tyr | missense_variant | 0.17 |
fgd1 | 491494 | p.Asp238Tyr | missense_variant | 0.15 |
mshA | 575652 | p.Arg102Leu | missense_variant | 0.2 |
mshA | 575699 | p.Glu118* | stop_gained | 0.33 |
mshA | 575716 | c.369C>T | synonymous_variant | 0.29 |
mshA | 575821 | c.474G>T | synonymous_variant | 0.15 |
mshA | 576181 | p.Lys278Asn | missense_variant | 0.22 |
mshA | 576602 | c.1255C>A | synonymous_variant | 0.18 |
ccsA | 620012 | p.Gly41Val | missense_variant | 0.13 |
ccsA | 620128 | p.Gly80Arg | missense_variant | 0.25 |
ccsA | 620303 | p.Trp138Leu | missense_variant | 0.67 |
ccsA | 620427 | c.537C>A | synonymous_variant | 0.29 |
ccsA | 620550 | c.660C>A | synonymous_variant | 0.18 |
ccsA | 620625 | p.Ile245Met | missense_variant | 0.21 |
ccsA | 620705 | p.Trp272Leu | missense_variant | 0.14 |
ccsA | 620742 | c.852G>T | synonymous_variant | 0.18 |
rpoB | 759693 | c.-114C>A | upstream_gene_variant | 0.29 |
rpoB | 759887 | c.81C>T | synonymous_variant | 0.25 |
rpoB | 760262 | c.456G>T | synonymous_variant | 0.25 |
rpoB | 760673 | c.867G>T | synonymous_variant | 0.13 |
rpoB | 760706 | p.Tyr300* | stop_gained | 0.14 |
rpoB | 760764 | p.Glu320* | stop_gained | 0.17 |
rpoB | 760768 | p.Pro321His | missense_variant | 0.17 |
rpoB | 760791 | p.Glu329* | stop_gained | 0.22 |
rpoB | 760833 | p.His343Asn | missense_variant | 0.18 |
rpoB | 760842 | p.Gln346Lys | missense_variant | 0.15 |
rpoB | 761012 | p.Asp402Glu | missense_variant | 0.13 |
rpoB | 761419 | p.Ala538Asp | missense_variant | 0.14 |
rpoB | 761816 | c.2010C>A | synonymous_variant | 0.2 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.15 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.12 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.12 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.12 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.13 |
rpoB | 762122 | c.2316C>T | synonymous_variant | 0.13 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.15 |
rpoB | 762137 | c.2331C>T | synonymous_variant | 0.14 |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.13 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.13 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.15 |
rpoB | 762156 | p.Val784Ile | missense_variant | 0.14 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.15 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.17 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.15 |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.13 |
rpoC | 762857 | c.-513C>G | upstream_gene_variant | 0.17 |
rpoC | 762863 | c.-507T>C | upstream_gene_variant | 0.17 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.15 |
rpoC | 762899 | c.-471G>C | upstream_gene_variant | 0.17 |
rpoC | 762917 | c.-453C>G | upstream_gene_variant | 0.17 |
rpoC | 762920 | c.-450C>T | upstream_gene_variant | 0.17 |
rpoC | 762923 | c.-447C>G | upstream_gene_variant | 0.17 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.17 |
rpoC | 762959 | c.-411G>C | upstream_gene_variant | 0.29 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.29 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.24 |
rpoC | 762989 | c.-381G>A | upstream_gene_variant | 0.25 |
rpoC | 762995 | c.-375G>T | upstream_gene_variant | 0.25 |
rpoC | 763004 | c.-366G>A | upstream_gene_variant | 0.14 |
rpoC | 763007 | c.-363C>T | upstream_gene_variant | 0.15 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.17 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 0.17 |
rpoC | 763049 | c.-321G>A | upstream_gene_variant | 0.18 |
rpoC | 763053 | c.-317_-315delTTGinsCTC | upstream_gene_variant | 0.17 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.15 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.2 |
rpoC | 763693 | p.Lys108Asn | missense_variant | 0.15 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.15 |
rpoC | 763699 | c.330G>C | synonymous_variant | 0.15 |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.15 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.15 |
rpoC | 763709 | c.340C>T | synonymous_variant | 0.15 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.17 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.17 |
rpoC | 763726 | c.357C>T | synonymous_variant | 0.17 |
rpoC | 763940 | p.Ala191Ser | missense_variant | 0.17 |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.17 |
rpoC | 763947 | p.Ala193Val | missense_variant | 0.17 |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.17 |
rpoC | 763960 | c.591T>G | synonymous_variant | 0.17 |
rpoC | 763963 | c.594C>T | synonymous_variant | 0.22 |
rpoC | 763987 | c.618C>T | synonymous_variant | 0.28 |
rpoC | 763991 | p.Ile208Leu | missense_variant | 0.29 |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.29 |
rpoC | 764024 | c.655_657delTTGinsCTC | synonymous_variant | 0.31 |
rpoC | 764029 | p.Glu220Asp | missense_variant | 0.33 |
rpoC | 764032 | p.Asp221Glu | missense_variant | 0.36 |
rpoC | 764040 | p.Ser224Thr | missense_variant | 0.42 |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.42 |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.43 |
rpoC | 764071 | c.702G>C | synonymous_variant | 0.43 |
rpoC | 764077 | c.708C>G | synonymous_variant | 0.46 |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.33 |
rpoC | 764084 | p.Asn239Val | missense_variant | 0.33 |
rpoC | 764093 | p.Arg242Ser | missense_variant | 0.15 |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.31 |
rpoC | 764126 | p.Thr253Glu | missense_variant | 0.22 |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.22 |
rpoC | 764140 | c.771C>T | synonymous_variant | 0.22 |
rpoC | 764143 | c.774G>C | synonymous_variant | 0.22 |
rpoC | 764153 | p.Gln262Lys | missense_variant | 0.22 |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.25 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.22 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.22 |
rpoC | 764485 | c.1116G>C | synonymous_variant | 0.13 |
rpoC | 764491 | c.1122G>T | synonymous_variant | 0.14 |
rpoC | 764800 | c.1431G>A | synonymous_variant | 0.15 |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.15 |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.15 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.16 |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.16 |
rpoC | 765397 | c.2028G>T | synonymous_variant | 0.15 |
rpoC | 765934 | c.2565C>T | synonymous_variant | 0.25 |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.25 |
rpoC | 765940 | c.2571A>T | synonymous_variant | 0.25 |
rpoC | 765946 | c.2577C>T | synonymous_variant | 0.25 |
rpoC | 765947 | c.2578T>C | synonymous_variant | 0.25 |
rpoC | 765952 | c.2583G>C | synonymous_variant | 0.22 |
rpoC | 765962 | c.2593T>C | synonymous_variant | 0.25 |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.25 |
rpoC | 766037 | p.Asp890Tyr | missense_variant | 0.4 |
rpoC | 766640 | p.His1091Asn | missense_variant | 0.15 |
rpoC | 766738 | c.3369G>T | synonymous_variant | 0.13 |
rpoC | 766750 | c.3381C>G | synonymous_variant | 0.12 |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.13 |
rpoC | 766771 | c.3402G>C | synonymous_variant | 0.13 |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.13 |
rpoC | 766777 | c.3408C>G | synonymous_variant | 0.13 |
rpoC | 766798 | c.3429C>G | synonymous_variant | 0.13 |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.14 |
rpoC | 766807 | c.3438T>C | synonymous_variant | 0.14 |
rpoC | 766837 | c.3468G>C | synonymous_variant | 0.15 |
rpoC | 767065 | c.3696G>T | synonymous_variant | 0.14 |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.17 |
rpoC | 767107 | p.Asn1246Lys | missense_variant | 0.12 |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.12 |
rpoC | 767155 | c.3786C>G | synonymous_variant | 0.14 |
rpoC | 767162 | p.Asn1265Ala | missense_variant | 0.15 |
rpoC | 767173 | c.3804C>G | synonymous_variant | 0.14 |
rpoC | 767174 | p.Asn1269Asp | missense_variant | 0.14 |
rpoC | 767180 | p.Ala1271Pro | missense_variant | 0.14 |
rpoC | 767185 | c.3816G>C | synonymous_variant | 0.14 |
rpoC | 767186 | p.Gln1273Asn | missense_variant | 0.14 |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.14 |
rpoC | 767197 | c.3828G>A | synonymous_variant | 0.14 |
mmpL5 | 775834 | p.Ala883Pro | missense_variant | 1.0 |
mmpL5 | 775970 | c.2511G>C | synonymous_variant | 0.14 |
mmpL5 | 775981 | p.Leu834Met | missense_variant | 0.14 |
mmpL5 | 775994 | p.Ile829Leu | missense_variant | 0.12 |
mmpL5 | 775997 | c.2484T>C | synonymous_variant | 0.12 |
mmpL5 | 776000 | c.2481G>C | synonymous_variant | 0.12 |
mmpL5 | 776009 | c.2472A>G | synonymous_variant | 0.24 |
mmpL5 | 776036 | p.Ser815Ala | missense_variant | 0.31 |
mmpL5 | 776039 | p.Ala814Ser | missense_variant | 0.31 |
mmpL5 | 776042 | c.2439C>G | synonymous_variant | 0.28 |
mmpL5 | 776048 | c.2433G>C | synonymous_variant | 0.29 |
mmpL5 | 776060 | c.2421C>G | synonymous_variant | 0.33 |
mmpL5 | 776072 | c.2409C>G | synonymous_variant | 0.29 |
mmpL5 | 776075 | c.2406C>G | synonymous_variant | 0.31 |
mmpL5 | 776081 | c.2400G>C | synonymous_variant | 0.31 |
mmpL5 | 776087 | p.Val798Leu | missense_variant | 0.31 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 0.38 |
mmpL5 | 776107 | p.Leu792Met | missense_variant | 0.13 |
mmpL5 | 776129 | c.2352C>G | synonymous_variant | 0.19 |
mmpL5 | 776132 | c.2349A>G | synonymous_variant | 0.19 |
mmpL5 | 776137 | p.Ser782Ala | missense_variant | 0.21 |
mmpL5 | 776141 | c.2340A>G | synonymous_variant | 0.2 |
mmpL5 | 776259 | p.Ala741Asp | missense_variant | 0.15 |
mmpL5 | 776336 | c.2145G>T | synonymous_variant | 0.15 |
mmpL5 | 776347 | p.Asp712Tyr | missense_variant | 0.15 |
mmpL5 | 777014 | c.1467C>A | synonymous_variant | 0.33 |
mmpL5 | 777509 | c.972G>A | synonymous_variant | 0.15 |
mmpR5 | 778181 | c.-809C>T | upstream_gene_variant | 0.15 |
mmpL5 | 778241 | p.Lys80Asn | missense_variant | 0.17 |
mmpL5 | 778278 | p.Ala68Glu | missense_variant | 0.15 |
mmpL5 | 778501 | c.-21C>A | upstream_gene_variant | 0.17 |
mmpS5 | 778830 | p.Gln26Lys | missense_variant | 0.18 |
mmpL5 | 779137 | c.-657G>T | upstream_gene_variant | 0.17 |
mmpR5 | 779299 | p.Glu104* | stop_gained | 0.18 |
mmpR5 | 779305 | p.Glu106* | stop_gained | 0.15 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 0.25 |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.14 |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.14 |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.2 |
rpsL | 781769 | c.210G>A | synonymous_variant | 0.23 |
rpsL | 781805 | c.246G>C | synonymous_variant | 0.2 |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.2 |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.2 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.25 |
rpsL | 781829 | c.270G>C | synonymous_variant | 0.33 |
rpsL | 781832 | c.273T>G | synonymous_variant | 0.33 |
rpsL | 781859 | c.300T>C | synonymous_variant | 0.5 |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.6 |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.6 |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.57 |
rpsL | 781901 | c.342C>T | synonymous_variant | 0.57 |
rpsL | 781916 | c.357T>G | synonymous_variant | 0.5 |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.5 |
rpsL | 781933 | c.374G>A | splice_region_variant&stop_retained_variant | 0.5 |
rplC | 800671 | c.-138G>T | upstream_gene_variant | 0.22 |
rplC | 800726 | c.-83G>A | upstream_gene_variant | 0.14 |
rplC | 801162 | c.354C>A | synonymous_variant | 0.18 |
fbiC | 1302931 | p.Val1Leu | missense_variant | 0.17 |
fbiC | 1303486 | p.Gly186Trp | missense_variant | 0.18 |
fbiC | 1304165 | p.Gly412Ala | missense_variant | 0.12 |
fbiC | 1304613 | c.1683T>C | synonymous_variant | 0.22 |
fbiC | 1304634 | c.1704C>G | synonymous_variant | 0.25 |
fbiC | 1304640 | c.1710A>C | synonymous_variant | 0.25 |
fbiC | 1304646 | c.1716T>C | synonymous_variant | 0.25 |
fbiC | 1304658 | c.1728C>G | synonymous_variant | 0.29 |
fbiC | 1304671 | p.Val581Thr | missense_variant | 0.29 |
fbiC | 1304676 | c.1746A>C | synonymous_variant | 0.29 |
fbiC | 1304682 | c.1752C>T | synonymous_variant | 0.25 |
fbiC | 1304691 | c.1761G>C | synonymous_variant | 0.2 |
fbiC | 1304694 | c.1764A>C | synonymous_variant | 0.18 |
fbiC | 1304703 | c.1773C>G | synonymous_variant | 0.2 |
fbiC | 1304715 | c.1785G>C | synonymous_variant | 0.17 |
fbiC | 1304724 | c.1794A>G | synonymous_variant | 0.15 |
fbiC | 1304727 | c.1797A>C | synonymous_variant | 0.15 |
fbiC | 1305367 | p.Glu813* | stop_gained | 0.22 |
Rv1258c | 1406686 | p.Val219Ile | missense_variant | 1.0 |
Rv1258c | 1406775 | p.Ala189Asp | missense_variant | 0.17 |
Rv1258c | 1406789 | c.552C>A | synonymous_variant | 0.18 |
Rv1258c | 1407402 | c.-62C>A | upstream_gene_variant | 0.2 |
embR | 1416485 | p.Ala288Glu | missense_variant | 0.29 |
embR | 1417052 | p.Pro99Gln | missense_variant | 0.2 |
embR | 1417440 | c.-93G>T | upstream_gene_variant | 0.2 |
embR | 1417449 | c.-102C>T | upstream_gene_variant | 0.18 |
atpE | 1460855 | c.-190T>C | upstream_gene_variant | 0.14 |
atpE | 1461006 | c.-39C>A | upstream_gene_variant | 0.18 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471663 | n.-183C>A | upstream_gene_variant | 0.17 |
rrs | 1471922 | n.78delT | non_coding_transcript_exon_variant | 0.19 |
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 0.19 |
rrs | 1471931 | n.87delA | non_coding_transcript_exon_variant | 0.2 |
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 0.2 |
rrs | 1471979 | n.134T>C | non_coding_transcript_exon_variant | 0.29 |
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472019 | n.174G>A | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472023 | n.178G>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472029 | n.184C>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472030 | n.185G>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472033 | n.188A>C | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472035 | n.190G>T | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472040 | n.195T>G | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472043 | n.198T>G | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472755 | n.910G>A | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472847 | n.1002G>C | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472848 | n.1003T>G | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 0.37 |
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472858 | n.1013G>T | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472859 | n.1014G>C | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472860 | n.1015C>G | non_coding_transcript_exon_variant | 0.39 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1473023 | n.1178G>T | non_coding_transcript_exon_variant | 0.2 |
rrs | 1473090 | n.1245G>T | non_coding_transcript_exon_variant | 0.15 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.25 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.25 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473572 | n.-85delG | upstream_gene_variant | 0.17 |
rrl | 1473668 | n.11C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473697 | n.40C>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1473699 | n.42A>G | non_coding_transcript_exon_variant | 0.2 |
rrl | 1473717 | n.60G>A | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473731 | n.74T>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473746 | n.89T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1473770 | n.113T>G | non_coding_transcript_exon_variant | 0.36 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1473814 | n.157A>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473815 | n.158T>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473816 | n.159C>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473828 | n.171G>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473829 | n.172G>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473830 | n.173T>G | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473831 | n.174G>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1473876 | n.219G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1473887 | n.230T>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1473888 | n.231T>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1473899 | n.242A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474135 | n.478G>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474255 | n.598C>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474285 | n.628C>A | non_coding_transcript_exon_variant | 0.2 |
rrl | 1474295 | n.638C>A | non_coding_transcript_exon_variant | 0.25 |
rrl | 1474534 | n.877G>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474673 | n.1016T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474676 | n.1019T>A | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474709 | n.1053delT | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474714 | n.1058delT | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474753 | n.1096A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 0.69 |
rrl | 1475031 | n.1374G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475108 | n.1451C>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.13 |
rrl | 1475343 | n.1686A>G | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1475639 | n.1982C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475759 | n.2102C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475764 | n.2107A>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475775 | n.2118G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475991 | n.2334T>C | non_coding_transcript_exon_variant | 0.45 |
rrl | 1475995 | n.2338G>A | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.35 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476035 | n.2378G>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476056 | n.2399G>A | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476088 | n.2431A>C | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476095 | n.2438C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476196 | n.2539C>A | non_coding_transcript_exon_variant | 0.14 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.46 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.46 |
rrl | 1476251 | n.2594T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.47 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476467 | n.2810A>C | non_coding_transcript_exon_variant | 0.13 |
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476583 | n.2926G>C | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.59 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.56 |
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476674 | n.3017T>C | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476679 | n.3022T>C | non_coding_transcript_exon_variant | 0.3 |
inhA | 1674629 | p.Ser143Tyr | missense_variant | 0.29 |
inhA | 1674839 | p.Ala213Val | missense_variant | 0.2 |
inhA | 1674957 | c.756G>T | synonymous_variant | 0.18 |
rpsA | 1833473 | c.-69C>G | upstream_gene_variant | 0.18 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.17 |
rpsA | 1833679 | c.138G>C | synonymous_variant | 0.13 |
rpsA | 1833697 | c.156C>G | synonymous_variant | 0.12 |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.17 |
rpsA | 1833709 | c.168C>T | synonymous_variant | 0.14 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.17 |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.17 |
rpsA | 1833760 | c.219C>T | synonymous_variant | 0.18 |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.21 |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.21 |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.23 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.29 |
rpsA | 1833808 | c.267G>C | synonymous_variant | 0.21 |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.14 |
rpsA | 1833968 | p.Gly143Cys | missense_variant | 0.17 |
rpsA | 1833976 | c.435C>T | synonymous_variant | 0.25 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.25 |
rpsA | 1833991 | c.450C>A | synonymous_variant | 0.31 |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.28 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.28 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.29 |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.28 |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.29 |
rpsA | 1834069 | c.528G>C | synonymous_variant | 0.21 |
rpsA | 1834096 | c.555G>C | synonymous_variant | 0.18 |
rpsA | 1834099 | c.558C>G | synonymous_variant | 0.17 |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.17 |
rpsA | 1834108 | c.567C>G | synonymous_variant | 0.18 |
rpsA | 1834526 | p.Arg329Ser | missense_variant | 0.2 |
rpsA | 1834579 | c.1038C>A | synonymous_variant | 0.18 |
tlyA | 1917902 | c.-38G>C | upstream_gene_variant | 0.12 |
tlyA | 1918458 | c.519C>A | synonymous_variant | 0.22 |
ndh | 2101779 | p.Leu422Ile | missense_variant | 0.17 |
ndh | 2102598 | p.Gly149Cys | missense_variant | 0.17 |
ndh | 2102616 | p.Asp143Tyr | missense_variant | 0.17 |
ndh | 2102722 | c.321C>T | synonymous_variant | 0.18 |
katG | 2154724 | p.Arg463Leu | missense_variant | 0.29 |
katG | 2154835 | p.Tyr426Cys | missense_variant | 0.15 |
katG | 2154852 | p.Met420Ile | missense_variant | 0.17 |
katG | 2155384 | p.Ala243Asp | missense_variant | 0.2 |
katG | 2156531 | c.-420C>A | upstream_gene_variant | 0.25 |
PPE35 | 2167820 | c.2793G>T | synonymous_variant | 0.15 |
PPE35 | 2167871 | c.2742G>T | synonymous_variant | 0.22 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 0.25 |
PPE35 | 2168527 | p.Gly696* | stop_gained | 0.14 |
PPE35 | 2168736 | p.Ser626Ile | missense_variant | 0.15 |
PPE35 | 2168913 | p.Pro567Gln | missense_variant | 0.17 |
PPE35 | 2169226 | p.Pro463Thr | missense_variant | 0.17 |
PPE35 | 2169271 | p.Gln448Lys | missense_variant | 0.15 |
Rv1979c | 2221899 | c.1266C>A | synonymous_variant | 0.18 |
Rv1979c | 2222109 | c.1056C>A | synonymous_variant | 0.17 |
Rv1979c | 2222349 | c.816G>T | synonymous_variant | 0.18 |
Rv1979c | 2222900 | p.Arg89Trp | missense_variant | 0.14 |
Rv1979c | 2223271 | c.-107G>T | upstream_gene_variant | 0.15 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 0.24 |
pncA | 2288872 | p.Gly124Cys | missense_variant | 0.22 |
pncA | 2288909 | p.Glu111Asp | missense_variant | 0.18 |
pncA | 2290115 | c.-874C>A | upstream_gene_variant | 0.14 |
kasA | 2518481 | p.Val123Phe | missense_variant | 0.13 |
kasA | 2518616 | p.Val168Met | missense_variant | 0.17 |
kasA | 2519355 | p.Gly414Val | missense_variant | 0.4 |
eis | 2714207 | p.Arg376Ser | missense_variant | 0.33 |
eis | 2715066 | c.267G>A | synonymous_variant | 0.25 |
folC | 2746172 | p.Gly476Val | missense_variant | 0.13 |
folC | 2747013 | p.Pro196Thr | missense_variant | 0.18 |
pepQ | 2859342 | c.1077G>T | synonymous_variant | 0.18 |
pepQ | 2860352 | p.Leu23Val | missense_variant | 0.29 |
ribD | 2987594 | p.Tyr252* | stop_gained | 0.15 |
Rv2752c | 3064990 | p.Arg401Leu | missense_variant | 0.25 |
Rv2752c | 3065008 | p.Pro395Gln | missense_variant | 0.22 |
thyX | 3068022 | c.-77C>A | upstream_gene_variant | 0.14 |
thyA | 3073725 | p.Lys249Asn | missense_variant | 0.14 |
thyA | 3073742 | p.Glu244* | stop_gained | 0.21 |
thyA | 3073754 | p.Glu240* | stop_gained | 0.17 |
thyA | 3073947 | c.525G>C | synonymous_variant | 0.15 |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.14 |
thyA | 3073956 | c.516G>C | synonymous_variant | 0.14 |
thyA | 3073959 | c.513T>C | synonymous_variant | 0.14 |
thyA | 3073968 | c.504C>G | synonymous_variant | 0.15 |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.14 |
thyA | 3073983 | c.489C>G | synonymous_variant | 0.15 |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.16 |
thyA | 3073993 | c.478_479delAGinsTC | synonymous_variant | 0.18 |
thyA | 3073999 | p.Arg158Lys | missense_variant | 0.18 |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.18 |
thyA | 3074436 | c.36C>A | synonymous_variant | 0.25 |
ald | 3087214 | p.Pro132Leu | missense_variant | 0.22 |
ald | 3087281 | c.462G>T | synonymous_variant | 0.18 |
ald | 3087356 | c.537C>T | synonymous_variant | 0.25 |
ald | 3087533 | c.714C>A | synonymous_variant | 0.17 |
ald | 3087672 | p.His285Asn | missense_variant | 0.15 |
ald | 3087886 | p.Ala356Asp | missense_variant | 0.25 |
Rv3083 | 3448540 | p.Gly13Cys | missense_variant | 0.2 |
Rv3083 | 3448668 | c.165G>T | synonymous_variant | 0.18 |
Rv3083 | 3448739 | p.Ala79Val | missense_variant | 0.22 |
Rv3083 | 3448863 | c.360C>A | synonymous_variant | 0.2 |
Rv3083 | 3449317 | p.Glu272* | stop_gained | 0.18 |
Rv3083 | 3449349 | p.Asp282Glu | missense_variant | 0.22 |
Rv3083 | 3449668 | p.Gly389Cys | missense_variant | 0.18 |
Rv3083 | 3449733 | c.1230G>T | synonymous_variant | 0.13 |
Rv3083 | 3449776 | p.Asp425Tyr | missense_variant | 0.15 |
Rv3083 | 3449879 | p.Pro459Gln | missense_variant | 0.2 |
Rv3083 | 3449933 | p.Pro477His | missense_variant | 0.18 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 0.21 |
fprA | 3474434 | p.Pro143His | missense_variant | 0.15 |
fprA | 3475202 | p.Pro399Gln | missense_variant | 0.2 |
fprA | 3475261 | p.Thr419Ala | missense_variant | 0.22 |
whiB7 | 3568662 | c.18C>T | synonymous_variant | 0.17 |
whiB7 | 3568680 | c.-1C>G | upstream_gene_variant | 0.15 |
whiB7 | 3568762 | c.-83G>A | upstream_gene_variant | 0.5 |
Rv3236c | 3611988 | p.Leu377Met | missense_variant | 0.25 |
Rv3236c | 3611995 | c.1122C>A | synonymous_variant | 0.33 |
Rv3236c | 3612120 | p.Arg333Trp | missense_variant | 0.27 |
Rv3236c | 3612167 | p.Gly317Val | missense_variant | 0.14 |
Rv3236c | 3612343 | c.774G>T | synonymous_variant | 0.14 |
Rv3236c | 3612351 | p.Ala256Ser | missense_variant | 0.14 |
Rv3236c | 3612750 | p.Gly123Trp | missense_variant | 0.15 |
Rv3236c | 3612813 | p.Thr102Ala | missense_variant | 0.22 |
Rv3236c | 3612898 | c.219G>T | synonymous_variant | 0.15 |
fbiA | 3640775 | p.Gly78Val | missense_variant | 0.15 |
fbiA | 3641017 | p.Pro159Thr | missense_variant | 0.22 |
fbiA | 3641032 | p.Arg164Cys | missense_variant | 0.2 |
fbiA | 3641050 | p.Gln170Lys | missense_variant | 0.2 |
fbiB | 3641853 | p.Gly107Cys | missense_variant | 0.14 |
fbiB | 3641858 | c.324G>T | synonymous_variant | 0.14 |
fbiB | 3641934 | p.Ala134Ser | missense_variant | 0.14 |
fbiB | 3641967 | p.Ala145Ser | missense_variant | 0.14 |
fbiB | 3641991 | p.Gly153* | stop_gained | 0.17 |
fbiB | 3642296 | p.Gln254His | missense_variant | 0.22 |
alr | 3840284 | p.Trp379Cys | missense_variant | 0.17 |
alr | 3840839 | p.Met194Ile | missense_variant | 0.4 |
alr | 3840928 | p.Asn165Tyr | missense_variant | 0.4 |
alr | 3841307 | c.114C>A | synonymous_variant | 0.14 |
rpoA | 3877533 | c.975C>A | synonymous_variant | 0.2 |
rpoA | 3877602 | c.906C>T | synonymous_variant | 0.22 |
rpoA | 3877617 | c.891G>C | synonymous_variant | 0.18 |
rpoA | 3877638 | c.870T>G | synonymous_variant | 0.23 |
rpoA | 3877647 | c.861C>T | synonymous_variant | 0.23 |
rpoA | 3877656 | c.852T>C | synonymous_variant | 0.23 |
rpoA | 3877662 | c.846C>T | synonymous_variant | 0.21 |
rpoA | 3877665 | c.843C>G | synonymous_variant | 0.21 |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.21 |
rpoA | 3877674 | c.834C>T | synonymous_variant | 0.21 |
rpoA | 3877679 | p.Ala277Ser | missense_variant | 0.21 |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.2 |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.21 |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.25 |
rpoA | 3877728 | c.780C>G | synonymous_variant | 0.15 |
rpoA | 3877732 | p.Arg259Leu | missense_variant | 0.15 |
rpoA | 3877734 | c.774G>C | synonymous_variant | 0.15 |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.17 |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.13 |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.14 |
rpoA | 3877908 | c.600T>C | synonymous_variant | 0.12 |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.12 |
rpoA | 3877926 | c.582G>C | synonymous_variant | 0.13 |
rpoA | 3877962 | c.546G>C | synonymous_variant | 0.18 |
rpoA | 3877971 | p.Asp179Glu | missense_variant | 0.18 |
rpoA | 3877986 | c.522G>C | synonymous_variant | 0.13 |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.13 |
rpoA | 3878105 | p.Glu135* | stop_gained | 0.17 |
rpoA | 3878115 | p.Lys131Asn | missense_variant | 0.15 |
ddn | 3987178 | p.Arg112Leu | missense_variant | 0.17 |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 0.17 |
clpC1 | 4038707 | c.1998C>G | synonymous_variant | 0.17 |
clpC1 | 4038710 | c.1995G>C | synonymous_variant | 0.2 |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 0.2 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.33 |
clpC1 | 4038881 | c.1824C>G | synonymous_variant | 0.4 |
clpC1 | 4038890 | c.1815G>A | synonymous_variant | 0.5 |
clpC1 | 4038905 | c.1800A>C | synonymous_variant | 0.67 |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.5 |
clpC1 | 4038911 | c.1794G>T | synonymous_variant | 0.4 |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.4 |
clpC1 | 4038917 | c.1788C>T | synonymous_variant | 0.4 |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 0.33 |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.25 |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.29 |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.3 |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.25 |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.25 |
clpC1 | 4038980 | c.1725C>T | synonymous_variant | 0.21 |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.2 |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.19 |
clpC1 | 4039001 | p.Asn568Ala | missense_variant | 0.19 |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.2 |
clpC1 | 4039079 | c.1626C>G | synonymous_variant | 0.13 |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 0.13 |
clpC1 | 4039091 | c.1614G>C | synonymous_variant | 0.13 |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 0.13 |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.15 |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.15 |
clpC1 | 4039145 | p.Gly520Cys | missense_variant | 0.15 |
clpC1 | 4039302 | p.Trp468Leu | missense_variant | 0.25 |
clpC1 | 4039334 | c.1371G>T | synonymous_variant | 0.2 |
clpC1 | 4039395 | p.Ser437* | stop_gained | 0.22 |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.22 |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.2 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.2 |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 0.18 |
clpC1 | 4039946 | c.759A>C | synonymous_variant | 0.15 |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.15 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.17 |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.15 |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.12 |
clpC1 | 4040015 | c.690G>C | synonymous_variant | 0.12 |
panD | 4043879 | c.403C>A | synonymous_variant | 0.22 |
panD | 4044128 | p.Gly52Arg | missense_variant | 0.12 |
embC | 4239974 | p.Leu38Met | missense_variant | 0.22 |
embC | 4240878 | p.Thr339Lys | missense_variant | 0.29 |
embC | 4240993 | c.1131G>C | synonymous_variant | 0.25 |
embC | 4241459 | p.Arg533Ser | missense_variant | 0.22 |
embC | 4241627 | p.His589Asn | missense_variant | 0.15 |
embC | 4241638 | c.1776G>A | synonymous_variant | 0.15 |
embA | 4243294 | p.Gly21Val | missense_variant | 0.15 |
embA | 4243329 | p.Leu33Met | missense_variant | 0.18 |
embA | 4243748 | c.516C>A | synonymous_variant | 0.67 |
embA | 4244360 | p.Asn376Lys | missense_variant | 0.25 |
embA | 4245433 | p.Ala734Val | missense_variant | 0.22 |
embB | 4245839 | c.-675G>A | upstream_gene_variant | 0.29 |
embA | 4245997 | p.Trp922Leu | missense_variant | 0.17 |
embB | 4246254 | c.-260C>T | upstream_gene_variant | 0.15 |
embA | 4246390 | p.Asp1053Val | missense_variant | 0.17 |
embA | 4246479 | p.Gly1083Cys | missense_variant | 0.22 |
embB | 4247108 | p.Gly199Arg | missense_variant | 0.2 |
embB | 4247119 | c.606C>A | synonymous_variant | 0.18 |
embB | 4247150 | c.637C>A | synonymous_variant | 0.15 |
embB | 4247161 | c.648G>T | synonymous_variant | 0.15 |
embB | 4249551 | p.Arg1013Pro | missense_variant | 0.2 |
embB | 4249736 | p.Pro1075Ser | missense_variant | 0.13 |
embB | 4249779 | p.Trp1089Leu | missense_variant | 0.14 |
aftB | 4267633 | p.Val402Phe | missense_variant | 0.17 |
aftB | 4267635 | p.Arg401Leu | missense_variant | 0.17 |
aftB | 4267647 | p.Asp397Gly | missense_variant | 0.18 |
aftB | 4267657 | p.Gly394Cys | missense_variant | 0.22 |
aftB | 4268442 | p.Arg132Leu | missense_variant | 0.25 |
aftB | 4268709 | p.Ala43Asp | missense_variant | 0.14 |
aftB | 4269324 | c.-488C>A | upstream_gene_variant | 0.17 |
aftB | 4269375 | c.-539G>A | upstream_gene_variant | 0.17 |
ubiA | 4269506 | p.Gly110* | stop_gained | 0.15 |
ethA | 4326099 | p.Gln459Lys | missense_variant | 0.14 |
ethA | 4326333 | p.Ala381Ser | missense_variant | 0.13 |
ethA | 4326412 | c.1062G>A | synonymous_variant | 0.14 |
ethR | 4327444 | c.-105C>A | upstream_gene_variant | 0.15 |
ethR | 4327708 | p.Ala54Ser | missense_variant | 0.14 |
ethR | 4327780 | p.Arg78Gly | missense_variant | 0.17 |
ethA | 4327950 | c.-477G>A | upstream_gene_variant | 0.18 |
whiB6 | 4338177 | c.345G>T | synonymous_variant | 0.18 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 0.17 |
whiB6 | 4338663 | c.-142G>A | upstream_gene_variant | 0.15 |
gid | 4407588 | c.615A>G | synonymous_variant | 0.21 |