EBG00000313325 - n.1012A>G


Drug resistance types
100 Sensitive 43 RR-TB 77 HR-TB 37 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 110 Other
lineage Counts
lineage Count
lineage4.9 92
lineage4.2.1 2
lineage3 142
lineage1.1.1 2
La1;lineage4.9 1
lineage4.8 34
lineage2.2.1.1 3
lineage1.1.2;lineage3.1.1;lineage4.3.4.2.1 1
M.canetti;lineage4.9 2
lineage4.2;lineage4.9 1
lineage2.2.1 14
lineage3;lineage4.9 1
La1.2.BCG 3
4
lineage4.3.3 4
La1.7.1 1
lineage4.1.2 1
La1.8.1 2
lineage4.3.4.2 1
lineage6.1.2 1
La1.7;lineage4.9;lineage7 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 2
lineage4.9;lineage6.3 1
lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 1
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9 6
La1.3 2
lineage6 1
lineage4 2
lineage4.5 2
lineage4.4.2 2
lineage3;lineage4.2;lineage4.6.1.2 1
lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage4.4.1.1.1 1
lineage2.2 2
lineage4.1.2.1 4
La1.7.X-unk4;lineage4.9 1
lineage4.1.1.3 1
lineage2.2.1.2 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.3 2
lineage4.9;lineage9 2
La3;lineage4.3.4 1
lineage1.1.2;lineage3.1.1;lineage4 2
lineage3;lineage4 1
lineage3;lineage4.3.4.2.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.7 1
lineage4.2.1.1 1
lineage2;lineage4 1
lineage4.6.2.2 1
lineage1.1.2 1
lineage4.3.4.2.1 1
lineage4.6.3;lineage4.9 1
lineage1.1.2;lineage3.1.1;lineage4.6.1.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.9;lineage7 1
La2;lineage4.9;lineage9 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 375
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR12882636 MDR-TB lineage3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR5341293 Sensitive lineage4.9 None
ERR978752 Other lineage4.8 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR19428517 Other lineage1.1.2;lineage3.1.1;lineage4.3.4.2.1 None
SRR5341455 Sensitive lineage4.9 None
SRR12634568 Sensitive lineage3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR26800466 HR-TB lineage3 None
SRR6044835 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR1180172 RR-TB lineage2.2.1 None
ERR4423724 RR-TB lineage3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR978761 Other lineage4.8 None
SRR5341469 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
ERR990541 Sensitive lineage3 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1140682 RR-TB lineage3 None
ERR137286 Other lineage4.9 None
ERR867558 Sensitive lineage3 None
ERR4816852 Other lineage4.9 None
ERR978755 RR-TB lineage4.8 None
SRR1140657 Other lineage3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR11082257 Sensitive lineage3 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR7361955 Other lineage3 None
ERR978694 Other lineage4.8 None
SRR26800492 Sensitive lineage3 None
ERR867564 Sensitive lineage3 None
SRR5341330 Other lineage4.9 None
ERR990552 Sensitive lineage3 None
SRR1062890 Sensitive lineage3 None
SRR21732585 Sensitive lineage3 None
ERR4798099 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR7535091 Sensitive lineage3 None
ERR10796628 Other lineage4.3.3 None
SRR1062900 RR-TB lineage3 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR1200609 Sensitive lineage3 et
SRR1791747 Other La1.8.1 None
ERR4820773 HR-TB lineage4.9 None
SRR1049640 Sensitive lineage3 None
ERR181952 Sensitive lineage3 mw
ERR4596902 MDR-TB lineage3 None
SAMEA3501015 Other lineage4.8 None
SRR5341400 Sensitive lineage4.9 None
SRR1140640 HR-TB lineage3 None
ERR926162 Sensitive lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
SRR1172310 MDR-TB lineage4.9 None
SRR6397953 RR-TB lineage3 ca
ERR978757 RR-TB lineage4.8 None
ERR9787033 Sensitive lineage6.1.2 None
ERR1007898 HR-TB lineage3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045548 Other lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR7535089 Sensitive lineage3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1140570 Sensitive lineage3 None
SRR14782054 Other lineage4.9 None
SRR12634570 Other lineage3 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR18913779 Other lineage3 None
SRR26800456 Sensitive lineage3 None
ERR4819754 Sensitive lineage3 None
ERR11068150 Sensitive lineage3 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR27450548 Sensitive lineage3 None
ERR040140 Pre-XDR-TB lineage3 ug
SRR1183965 Sensitive lineage4.9 None
ERR987783 HR-TB lineage3 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR978727 Other lineage4.8 None
ERR926158 Sensitive lineage4.9 None
SRR19428570 Other lineage3 None
SRR5341308 HR-TB lineage4.9 None
SRR1049604 Sensitive lineage3 None
ERR9286093 Sensitive lineage3 None
ERR5979455 Sensitive lineage3 None
SRR2100827 HR-TB lineage3 None
ERR1063846 HR-TB lineage4.9 None
SRR1173279 Sensitive lineage3 None
ERR990546 Sensitive lineage3 None
SRR6511621 HR-TB lineage4.9 None
ERR4818583 Other lineage4.3.3 None
ERR867555 Other lineage3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR040118 MDR-TB lineage3 ug
SRR19428585 Other lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR1049619 RR-TB lineage3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR323107 HR-TB lineage4.9 None
SAMN02381020 HR-TB lineage3 ug
SRR8692825 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR9787362 Sensitive lineage6 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR038743 RR-TB lineage3 ug
SRR5341453 Other lineage4.9 None
ERR990551 Sensitive lineage3 None
SRR1173281 Other lineage3 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR926164 Other lineage4.9 None
ERR2517625 Sensitive lineage3 nl
SRR21713567 Other lineage4.5 None
SRR13423546 Other lineage4.4.2 None
SRR12634617 Other lineage3 None
SRR26800455 HR-TB lineage3 None
ERR987753 HR-TB lineage3;lineage4.2;lineage4.6.1.2 None
ERR4423739 MDR-TB lineage3 None
ERR4797184 HR-TB lineage4.9 None
ERR987724 RR-TB lineage3 None
SRR1049584 Other lineage3 None
SRR5341467 Other lineage4.9 None
SRR19428598 Sensitive lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12634595 Other lineage3 None
ERR9285851 HR-TB lineage3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR12634546 HR-TB lineage3 None
SAMEA3501070 RR-TB lineage4.8 None
ERR990539 Sensitive lineage3 None
DRR034348 Other lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR987742 HR-TB lineage3 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR2706996 RR-TB lineage3 cd
ERR926155 Other lineage4.9 None
ERR4820586 Other lineage3 gb
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR12882634 Sensitive lineage3 None
ERR3275555 Sensitive lineage3 nl
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR8692887 Other None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR12882715 Sensitive lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR911929_ERR911930 Other lineage4.8 None
ERR270717 HR-TB lineage3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR040139 MDR-TB lineage3 ug
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR978756 Other lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1049583 Other lineage3 None
SRR5341298 Other lineage4.9 None
SRR26800453 Sensitive lineage3 None
ERR702405 HR-TB lineage4.9 None
SRR6397682 Sensitive lineage3 ca
ERR11050311 HR-TB lineage3 None
ERR978694_ERR978693 Other lineage4.8 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR9285921 Sensitive lineage3 None
ERR2513685 Sensitive lineage3 gb
ERR233347 Sensitive lineage3 None
ERR040141 MDR-TB lineage3 ug
SRR6397506 RR-TB lineage3 ca
SRR6982239 Sensitive lineage4.1.1.3 None
SRR1062910 HR-TB lineage3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR7535082 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR1062907 Sensitive lineage3 None
SRR7535037 Sensitive lineage3 None
SRR6397583 RR-TB lineage3 ca
ERR987719 HR-TB lineage3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR978762 Other lineage4.8 None
ERR9286076 MDR-TB lineage3 None
ERR11068145 Other lineage3 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1062899 Sensitive lineage3 None
SAMN02381017 Sensitive lineage3 ug
ERR978748 Other lineage4.8 None
ERR405192 Sensitive lineage3 None
ERR2446311 Sensitive lineage3 nl
ERR9285820 Sensitive lineage3 None
ERR5979447 Sensitive lineage3 None
SRR7535078 Other lineage3 None
ERR323066 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR990542 Sensitive lineage3 None
ERR11044652 Sensitive lineage3 None
SRR22424787 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02381000 Sensitive lineage3 ug
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR19409781 Sensitive lineage1.1.2;lineage3.1.1;lineage4 None
SRR9971270 RR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR1173740 Other lineage3;lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR190343 Sensitive lineage3;lineage4.3.4.2.1 mw
ERR751326 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
DRR184982 Other lineage2.2.1 None
SRR7535088 Sensitive lineage3 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR4596910 Sensitive lineage4.9 None
ERR9286121 Sensitive lineage3 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR9125738 Sensitive lineage3 None
ERR9285892 Sensitive lineage3 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR987770 HR-TB lineage3 None
ERR473332 Other lineage4.9 None
ERR4820484 Sensitive lineage4.8 None
SRR12882758 Sensitive lineage3 None
SRR1173856 Sensitive lineage3 None
ERR911929 Other lineage4.8 None
ERR2145508 MDR-TB lineage3 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR978734 RR-TB lineage4.8 None
SRR1049603 Sensitive lineage3 None
ERR1023236 Other lineage6.1.3 None
ERR11465929 RR-TB lineage3 None
SRR1915485 Other La1.2.BCG None
SRR6397731 RR-TB lineage3 ca
SAMN02381007 RR-TB lineage3 ug
SRR6785281 Other lineage4.2.1.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1238558 Other lineage4.9 None
SRR12634624 Sensitive lineage3 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR040129 MDR-TB lineage3 ug
ERR6359082 Other lineage4.9 None
SRR12882266 Sensitive lineage3 None
SRR26800481 Sensitive lineage3 None
ERR11068958 Sensitive lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR12882765 Sensitive lineage3 None
ERR971389 Other lineage4.9 None
ERR987722 MDR-TB None
ERR11775928 MDR-TB lineage3 None
SAMN02380991 Other lineage3 ug
ERR9786597 Other lineage4.6.2.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR5979452 MDR-TB lineage3 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR11050495 Sensitive lineage3 None
ERR4797474 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR8692894 Other lineage4.9 None
ERR4815751 Sensitive lineage3 None
SRR1140693 Sensitive lineage3 None
SRR3725715 Sensitive lineage3 None
ERR978747 Other lineage4.8 None
ERR9285890 Sensitive lineage3 None
SRR15316595 RR-TB lineage4.4.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR1140719 Sensitive lineage3 None
SRR1062881 Other lineage3 None
SRR3675492 Other La1.7;lineage4.9 None
ERR5979437 Sensitive lineage3 None
SRR6397649 RR-TB lineage3 ca
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR9285959 Sensitive lineage3 None
SRR12634572 Sensitive lineage3 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR12634554 Other lineage3 None
SRR1049639 Sensitive lineage3 None
ERR978735 Other lineage4.8 None
ERR3275709 HR-TB lineage3 nl
SRR2100044 Sensitive lineage3 None
SRR16058004 Sensitive lineage3 None
ERR11049590 Sensitive lineage3 None
ERR11049774 Sensitive lineage3 None
ERR4816470 HR-TB lineage3 None
ERR926160 Other lineage4.9 None
ERR040136 MDR-TB lineage3 ug
SRR10315567 HR-TB lineage2.2.1 None
ERR911930 Other lineage4.8 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1174282 MDR-TB lineage3 None
SRR19392723 Sensitive lineage1.1.2;lineage3.1.1;lineage4.6.1.1 None
SAMEA3450033 Other lineage4.8 None
ERR4822629 Other lineage3 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR19415520 Other lineage1.1.2;lineage3.1.1;lineage4 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1049618 RR-TB lineage3 None
ERR9285901 Sensitive lineage3 None
ERR926159 Sensitive lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR4796254 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR6397813 Sensitive lineage3 ca