EBG00000313339 - n.1096A>G


Drug resistance types
54 Sensitive 11 RR-TB 95 HR-TB 33 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 98 Other
lineage Counts
lineage Count
lineage4.9 129
La1.8.1 5
lineage2.2.1 16
lineage4.3.4.2.1 9
La3;lineage4 1
M.canetti;lineage4.9;lineage9 1
4
lineage3.1 1
La1;lineage4.9 3
lineage4.1.2.1 9
lineage3.1.3 1
lineage4.3.4 1
lineage6.1.1 2
lineage2.2.1.1 3
La1.7.1 1
lineage4.1.2 2
lineage4.3.4.1 6
lineage4.6.3;lineage4.9 2
lineage4.9;lineage6.3 2
La1.7;lineage4.9;lineage7 3
La1;lineage2;lineage4.9 1
lineage5.2 3
lineage4.9;lineage9 3
La3;lineage4.9 8
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage4.1.1.3 2
La1.7;lineage4.9 6
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La2;lineage4.9 2
lineage4.2.1 1
lineage4.3.4.2 2
lineage2.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage2.2 4
lineage1.1.3.1 1
lineage4 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3 3
lineage4.6.2.2 1
lineage1.1.2 3
lineage4.6.1.1 2
lineage2.2.1.2 2
La1.2 2
lineage4.8.1 1
lineage4.3.3 1
La3;M.canetti;lineage4.9 1
lineage4.8 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage6.1.3 1
La1.7;lineage3.1;lineage4 1
lineage4.9;lineage7 4
lineage2.2;lineage4 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.4.1.2 1
La1.2.BCG 1
lineage4.4.2 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
lineage2.1;lineage4.9;lineage7 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
lineage4.9.1 2
lineage6.1.3 2
La1.2;La1.8.1 1
lineage1;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage1.2.2.2 1
lineage6 1
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.1 1
lineage6.1.2 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 297
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283021 MDR-TB lineage4.9 None
SRR1791725 Other La1.8.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR8692887 Other None
SRR28351442 HR-TB lineage3.1 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4797264 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR702405 HR-TB lineage4.9 None
ERR3797067 Other La1.8.1 None
SRR6046492 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR3797079 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR11466444 Sensitive lineage4.3.4.1 None
SRR5341400 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR926157 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6981999 Sensitive lineage2.2.1 None
SRR6045347 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR926160 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
ERR2706950 MDR-TB lineage5.2 cd
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323107 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
SRR8692905 Sensitive None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR987722 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
ERR9786597 Other lineage4.6.2.2 None
ERR11465715 Sensitive lineage4.1.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR6866807 RR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769427 Other La1.2 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR11465604 HR-TB lineage4.8.1 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR6866410 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4799025 Other lineage4.8 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283030 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3799304 RR-TB lineage6.1.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
SRR8692904 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR1063858 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR3797081 Sensitive lineage4.9 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
SRR8692890 Other lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341293 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR15723025 Sensitive lineage2.2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR5341425 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR7821163 Other lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
DRR188519 Other lineage4.4.2 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR1063896 HR-TB None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR6358979 HR-TB lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR3797029 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR8692894 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR4769421 Other La1.2 None
ERR11488417 MDR-TB lineage4.1.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR11466070 Sensitive lineage4.3.4.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4798099 HR-TB lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR11466061 Sensitive lineage4.9.1 None
ERR926156 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180226 HR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR7236177 Other La1.8.1 None
ERR926158 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR6511621 HR-TB lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6044875 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR11466062 Sensitive lineage4.9.1 None
ERR4797184 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6044835 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR502510 HR-TB lineage4.9 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None