EBG00000313339 - n.1096A>G


Drug resistance types
79 Sensitive 3 RR-TB 103 HR-TB 19 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
lineage4.9 38
79
lineage4 67
lineage4;lineage2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 2
lineage4.3.4 2
lineage1.2.1.1 1
lineage2.1 3
lineage4.8 5
lineage4.1 2
lineage3 5
lineage3.1.3 1
lineage1.1.2 4
lineage4.1.1.2 1
lineage1.1.1 1
lineage4.1.2.1 5
lineage2.2.1 20
La1.8.1 8
lineage5.2 3
lineage4.6.5 1
lineage2.2.1.1 3
lineage4.1.2 2
La2 1
lineage4.3.3 2
lineage4.4.1.2 1
lineage4.4.2 1
lineage2.2 5
lineage4.6.1.1 2
La1 1
lineage6.1.1 2
La1.2 3
lineage4;lineage3.1 1
lineage3.1.2 1
lineage1.2.2.2 1
lineage2.2.1.2 3
lineage4.5 1
lineage1.1.3.1 1
lineage4.3.4.2 2
lineage4.6.2.2 1
lineage6.1.3 1
lineage6 2
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.2.1 1
La1.7.1 1
lineage7;lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 291
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692807 Other lineage4.9 None
SRR8692759 Other lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692812 Other lineage4.9 None
SRR8692780 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692885 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692825 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
SRR8692904 Other lineage4.9 None
SRR8692824 Other lineage4.9 None
SRR8692890 Other lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR8692776 Other lineage4.9 None
SRR8692811 Other lineage4.9 None
SRR8692887 Other None
SRR8692899 Other lineage4.9 None
ERR176778 HR-TB None
ERR176779 HR-TB None
SRR8692791 Other lineage4.9 None
SRR8692832 Other lineage4.9 None
SRR8692888 Other lineage4.9 None
SRR3675270 HR-TB None
ERR181744 HR-TB None
ERR181824 HR-TB lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4814734 Other lineage1.2.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR4815474 Sensitive lineage4.9 None
ERR212034 HR-TB None
SRR3675284 HR-TB lineage4.9 None
ERR176651 HR-TB None
ERR181887 HR-TB None
ERR176740 HR-TB None
SRR5341422 HR-TB lineage2.1 None
SRR3675456 HR-TB None
ERR4816110 Sensitive lineage4.9 gb
SRR3675555 HR-TB None
ERR2229697 Sensitive lineage4.8 dk
ERR2124085 Other lineage4.8 None
ERR212123 Other None
ERR212125 HR-TB lineage4 None
ERR212138 HR-TB lineage4 None
SRR5341384 Sensitive lineage4.9 None
ERR2446566 Other lineage4.1 None
ERR4817942 Sensitive lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818110 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR4817554 Other lineage1.1.1 None
ERR2512656 Sensitive lineage4.1.2.1 gb
SRR5341453 Sensitive None
ERR4819051 Other lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341387 Other lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341396 Other lineage4 None
SRR5341300 Other lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
SRR5341425 Other lineage4 None
SRR5341456 Other None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341313 HR-TB None
SRR5341310 Other lineage1.1.2 None
SRR5341308 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341469 Other lineage4 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5535933 HR-TB None
SRR5341470 HR-TB None
SRR5431730 Other La1.8.1 None
ERR2693227 Other lineage4.9 None
ERR2706950 MDR-TB lineage5.2 cd
ERR2660539 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045880 Other lineage4.6.5 gb
SRR6044835 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6045010 Other lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6046046 Other None
SRR6045217 Other lineage4 None
SRR6511621 HR-TB None
SRR6046225 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046492 Other None
SRR6046878 HR-TB lineage4 None
ERR4831117 HR-TB None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR4831839 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6981999 Sensitive lineage2.2.1 None
ERR4831898 MDR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
SRR8217918 HR-TB None
SRR9971335 Pre-XDR-TB lineage4.3.3 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9970979 Sensitive lineage4.8 None
ERR323053 HR-TB None
ERR323107 Other lineage4 None
ERR323039 HR-TB None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
DRR188519 Other lineage4.4.2 None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR1063862 HR-TB None
ERR1063857 HR-TB None
ERR108471 HR-TB lineage4 None
ERR1063896 Sensitive None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283040 HR-TB None
ERR3283021 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283028 Other None
ERR3283031 HR-TB None
ERR3283055 HR-TB None
ERR3283047 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797046 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797067 Other La1.8.1 None
ERR3445503 HR-TB None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797068 Other La1.8.1 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797081 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR4769427 Other La1.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR387051 HR-TB None
ERR4024991 Other None
ERR405209 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR473332 Other lineage4 None
ERR4769421 Other La1.2 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4796929 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR4797474 Other None
ERR4798504 Other lineage3 None
ERR4799513 HR-TB lineage2.2 None
ERR6866022 Other None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4811493 HR-TB None
ERR6358979 Other None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR6866639 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR6866807 HR-TB lineage4 None
ERR7821163 Other lineage2.2.1 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR751326 Sensitive lineage4 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786639 Sensitive lineage4.8 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9787030 Sensitive lineage6 None
ERR9787362 Sensitive lineage6 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
SRR10809074 Sensitive lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR1173568 Other lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR1172146 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172214 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1174897 HR-TB None
SRR1173777 Other lineage4 None
SRR20969731 Other lineage2.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14088382 MDR-TB lineage3 None
SRR14782405 HR-TB None
SRR17832802 HR-TB lineage3 None
SRR1791725 Other La1.8.1 None
SRR1791747 Other La1.8.1 None
SRR19295647 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR21736944 Sensitive lineage1.1.2 None