EBG00000313339 - n.2872A>G
Drug resistance types
117 Sensitive
15 RR-TB
83 HR-TB
32 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
100 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2 | 1 |
| 76 | |
| lineage3.1.3 | 1 |
| lineage4.9 | 54 |
| lineage4.8 | 5 |
| lineage4.3.2.1 | 4 |
| lineage1.1.2 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4 | 69 |
| lineage4.3.4.2.1 | 4 |
| lineage3 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2 | 3 |
| lineage5.2 | 3 |
| lineage2.2.1 | 32 |
| lineage4.1.1.3 | 10 |
| lineage4.9;lineage2.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.8.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1 | 2 |
| lineage4.1.2.1 | 5 |
| lineage2.2 | 4 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1 | 1 |
| lineage4.3.4.1 | 3 |
| La1.8.1 | 18 |
| lineage4.1.2 | 3 |
| lineage4;lineage2 | 1 |
| lineage4.3.3 | 7 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| lineage6.1.1 | 2 |
| lineage4;La1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4;La1.8.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage6 | 2 |
| lineage6.1.3 | 2 |
| lineage4.7 | 3 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage3.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.2.2.1 | 1 |
| La1.7.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 368 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2179737 | HR-TB | lineage4.2 | None | ERR1035162 | Other | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818086 | Sensitive | lineage4.8 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR5341396 | Other | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341319 | Other | lineage3 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4820144 | Sensitive | lineage4.3.2 | None | ERR2706950 | MDR-TB | lineage5.2 | cd | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SAMN02403525 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693227 | Other | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046362 | HR-TB | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046824 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR6511621 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6981912 | Sensitive | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR6982070 | RR-TB | None | ERR5162108 | Other | La1.8.1 | None | ERR502889 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971319 | MDR-TB | lineage4.1.2 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR8217918 | HR-TB | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323107 | Other | lineage4 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11466445 | Sensitive | lineage4.3.4.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035122 | Sensitive | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR144568 | Pre-XDR-TB | None | ERR133986 | HR-TB | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3439465 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3801358 | Sensitive | lineage6.1.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4187666 | Other | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4188033 | Other | lineage4;La1.8.1 | None | ERR4187720 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4187995 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188369 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR473332 | Other | lineage4 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188396 | Sensitive | La1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769421 | Other | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797474 | Other | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR8774089 | Sensitive | lineage4.1.1.3 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR8774092 | Sensitive | lineage4.1.1.3 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8774091 | Sensitive | lineage4.1.1.3 | None | ERR9119669 | HR-TB | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR9787146 | Sensitive | lineage6.1.1 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173587 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1173777 | Other | lineage4 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR16370617 | Sensitive | lineage4.7 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18911120 | HR-TB | None | SRR8692790 | RR-TB | lineage4 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR21736381 | Sensitive | lineage4.3.2 | None | SRR19317531 | Sensitive | lineage4.7 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR21747022 | Pre-XDR-TB | lineage2.2.2 | None | SRR8692759 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692868 | Sensitive | lineage4.9 | None | SRR8692854 | Other | lineage4.9 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692897 | Other | lineage4.9 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692878 | Other | lineage4.9 | None | SRR8692855 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692811 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692888 | Other | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR176779 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814470 | Other | lineage3.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR212034 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675502 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR176651 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR216928 | Other | lineage4.9.1 | None | ERR212138 | HR-TB | lineage4 | None |
|---|
