TB-Profiler result

Run: SRR8692800
Summary

Run ID: SRR8692800

Sample name:

Date: 13-08-2023 20:44:19

Number of reads: NA

Percentage reads mapped: NA

Strain: lineage4

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 0.94
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rpsL 781687 p.Lys43Arg missense_variant 0.24 streptomycin
rplC 801268 p.Cys154Arg missense_variant 0.33 linezolid
ethA 4326426 c.1047delT frameshift_variant 0.15 ethionamide, ethionamide
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5260 p.Lys7Asn missense_variant 0.2
gyrB 5270 p.Glu11* stop_gained 0.2
gyrB 5493 p.Pro85Gln missense_variant 0.14
gyrB 5990 p.Phe251Leu missense_variant 0.14
gyrB 6154 c.915C>A synonymous_variant 0.25
gyrB 6246 p.Lys336Arg missense_variant 0.25
gyrA 6334 c.-968G>T upstream_gene_variant 0.22
gyrB 6426 p.Phe396Tyr missense_variant 0.4
gyrB 6750 p.Ala504Glu missense_variant 0.17
gyrB 6972 p.Pro578Gln missense_variant 0.21
gyrA 7502 c.201C>T synonymous_variant 0.33
gyrA 7506 p.Ser69Gly missense_variant 0.33
gyrA 7585 p.Ser95Thr missense_variant 0.22
gyrA 7607 c.306C>G synonymous_variant 0.18
gyrA 7631 c.330G>C synonymous_variant 0.15
gyrA 7632 p.Asp111His missense_variant 0.15
gyrA 7637 c.336C>T synonymous_variant 0.15
gyrA 7716 p.Met139Leu missense_variant 0.13
gyrA 7729 p.Arg143Lys missense_variant 0.14
gyrA 8791 p.Arg497Leu missense_variant 0.14
gyrA 8801 c.1500G>T synonymous_variant 0.14
gyrA 9218 c.1917C>T synonymous_variant 0.14
gyrA 9230 c.1929T>C synonymous_variant 0.14
gyrA 9236 c.1935G>C synonymous_variant 0.12
gyrA 9266 p.Asp655Glu missense_variant 0.15
gyrA 9267 p.Asn656Gly missense_variant 0.15
gyrA 9275 c.1974G>A synonymous_variant 0.16
gyrA 9296 c.1995T>C synonymous_variant 0.15
gyrA 9299 c.1998G>C synonymous_variant 0.16
gyrA 9304 p.Gly668Glu missense_variant 0.26
gyrA 9311 c.2010C>T synonymous_variant 0.17
gyrA 9325 p.Ser675Cys missense_variant 0.15
gyrA 9335 c.2034G>T synonymous_variant 0.14
gyrA 9521 c.2220C>T synonymous_variant 0.17
fgd1 491157 c.375C>T synonymous_variant 0.17
fgd1 491613 c.831C>A synonymous_variant 0.17
fgd1 491742 c.960T>C synonymous_variant 0.33
mshA 575248 c.-99delG upstream_gene_variant 0.12
mshA 575265 c.-83C>A upstream_gene_variant 0.14
mshA 575279 c.-69C>A upstream_gene_variant 0.17
mshA 575282 c.-66C>T upstream_gene_variant 0.17
mshA 575373 p.Gly9Val missense_variant 0.29
mshA 575682 p.Val112Ala missense_variant 0.2
mshA 575717 p.Asp124Tyr missense_variant 0.15
mshA 576318 p.Arg324Leu missense_variant 0.4
ccsA 620456 p.Ala189Asp missense_variant 0.17
ccsA 620529 c.639G>T synonymous_variant 0.18
ccsA 620592 c.702C>A synonymous_variant 0.2
ccsA 620674 p.Asp262Tyr missense_variant 0.22
rpoB 759809 c.3G>T start_lost 0.2
rpoB 760176 p.Ala124Ser missense_variant 0.15
rpoB 760211 c.405C>T synonymous_variant 0.17
rpoB 760400 c.594G>C synonymous_variant 0.25
rpoB 760405 p.Pro200Gln missense_variant 0.2
rpoB 760407 p.Ser201Gly missense_variant 0.22
rpoB 760415 c.609C>T synonymous_variant 0.22
rpoB 760424 c.618C>G synonymous_variant 0.22
rpoB 760430 c.624T>C synonymous_variant 0.2
rpoB 760634 c.828T>C synonymous_variant 0.29
rpoB 761015 c.1209G>C synonymous_variant 0.15
rpoB 761027 c.1221A>C synonymous_variant 0.17
rpoB 761036 c.1230G>C synonymous_variant 0.18
rpoB 761037 c.1231T>C synonymous_variant 0.18
rpoB 761049 p.Arg415Ser missense_variant 0.22
rpoB 761054 c.1248G>C synonymous_variant 0.22
rpoB 761057 c.1251G>C synonymous_variant 0.22
rpoB 761060 c.1254C>G synonymous_variant 0.22
rpoB 761063 c.1257C>G synonymous_variant 0.22
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.33
rpoB 761102 c.1296A>G synonymous_variant 0.33
rpoB 761132 c.1326G>T synonymous_variant 0.22
rpoB 761133 c.1327T>C synonymous_variant 0.22
rpoB 761147 c.1341C>T synonymous_variant 0.18
rpoB 761445 p.Arg547Ser missense_variant 0.15
rpoB 761579 c.1773G>C synonymous_variant 0.18
rpoB 761606 c.1800C>G synonymous_variant 0.23
rpoB 761612 c.1806G>T synonymous_variant 0.23
rpoB 761615 c.1809A>C synonymous_variant 0.23
rpoB 761636 c.1830G>C synonymous_variant 0.21
rpoB 761648 c.1842T>C synonymous_variant 0.17
rpoB 761666 c.1860G>C synonymous_variant 0.16
rpoB 761669 c.1863C>T synonymous_variant 0.16
rpoB 761675 c.1869G>T synonymous_variant 0.18
rpoB 761690 c.1884G>C synonymous_variant 0.12
rpoB 761693 c.1887G>C synonymous_variant 0.12
rpoB 761849 c.2043C>T synonymous_variant 0.18
rpoB 761948 c.2142G>C synonymous_variant 0.18
rpoB 761954 c.2148C>G synonymous_variant 0.15
rpoB 761984 p.Glu726Asp missense_variant 0.18
rpoB 761990 c.2184G>C synonymous_variant 0.15
rpoB 761999 c.2193G>C synonymous_variant 0.17
rpoB 762002 c.2196C>G synonymous_variant 0.17
rpoB 762028 p.Leu741Pro missense_variant 0.18
rpoB 762047 c.2241G>A synonymous_variant 0.15
rpoB 762053 c.2247T>C synonymous_variant 0.17
rpoB 762065 c.2259T>C synonymous_variant 0.18
rpoB 762233 c.2427G>C synonymous_variant 0.12
rpoB 762245 c.2439G>C synonymous_variant 0.12
rpoC 762434 c.-936T>C upstream_gene_variant 0.16
rpoC 762443 c.-927G>C upstream_gene_variant 0.17
rpoC 762449 c.-921C>G upstream_gene_variant 0.16
rpoC 762452 c.-918G>C upstream_gene_variant 0.16
rpoC 762470 c.-900G>C upstream_gene_variant 0.22
rpoC 762488 c.-882G>C upstream_gene_variant 0.22
rpoC 762491 c.-879T>C upstream_gene_variant 0.22
rpoB 762507 p.Leu901Met missense_variant 0.22
rpoB 762510 p.Ala902Pro missense_variant 0.22
rpoC 762533 c.-837T>C upstream_gene_variant 0.2
rpoC 762536 c.-834T>C upstream_gene_variant 0.2
rpoC 762537 c.-833T>C upstream_gene_variant 0.2
rpoC 762551 c.-819C>T upstream_gene_variant 0.33
rpoC 762560 c.-810A>T upstream_gene_variant 0.3
rpoC 762563 c.-807G>T upstream_gene_variant 0.3
rpoB 762685 p.Ala960Glu missense_variant 0.22
rpoC 762917 c.-453C>G upstream_gene_variant 0.16
rpoC 762920 c.-450C>T upstream_gene_variant 0.15
rpoC 762923 c.-447C>G upstream_gene_variant 0.16
rpoC 762929 c.-441G>C upstream_gene_variant 0.15
rpoC 762959 c.-411G>C upstream_gene_variant 0.12
rpoC 762962 c.-408C>T upstream_gene_variant 0.16
rpoC 763004 c.-366G>A upstream_gene_variant 0.19
rpoC 763007 c.-363C>T upstream_gene_variant 0.19
rpoC 763028 c.-342T>C upstream_gene_variant 0.17
rpoC 763031 c.-339T>C upstream_gene_variant 0.23
rpoC 763049 c.-321G>A upstream_gene_variant 0.17
rpoC 763053 c.-317_-315delTTGinsCTC upstream_gene_variant 0.17
rpoC 763070 c.-300T>C upstream_gene_variant 0.19
rpoC 763076 c.-294C>G upstream_gene_variant 0.2
rpoC 763079 c.-291C>G upstream_gene_variant 0.2
rpoC 763082 c.-288C>T upstream_gene_variant 0.19
rpoC 763085 c.-285C>G upstream_gene_variant 0.19
rpoC 763103 c.-267G>C upstream_gene_variant 0.2
rpoC 763115 c.-255T>C upstream_gene_variant 0.18
rpoC 763136 c.-234C>T upstream_gene_variant 0.19
rpoC 763148 c.-222G>C upstream_gene_variant 0.12
rpoC 763375 c.6C>A synonymous_variant 0.25
rpoC 763411 c.42T>C synonymous_variant 0.31
rpoC 763414 c.45T>G synonymous_variant 0.31
rpoC 763423 p.Glu18Asp missense_variant 0.31
rpoC 763430 c.61_63delAGGinsCGC synonymous_variant 0.33
rpoC 763433 p.Gln22Asn missense_variant 0.33
rpoC 763443 p.Tyr25Phe missense_variant 0.33
rpoC 763456 c.87A>G synonymous_variant 0.31
rpoC 763468 c.99G>C synonymous_variant 0.31
rpoC 763486 c.117T>C synonymous_variant 0.55
rpoC 763495 c.126G>A synonymous_variant 0.46
rpoC 763528 c.159G>A synonymous_variant 0.17
rpoC 763531 c.162G>T synonymous_variant 0.17
rpoC 763546 c.177A>G synonymous_variant 0.2
rpoC 763573 c.204G>C synonymous_variant 0.2
rpoC 763594 c.225C>T synonymous_variant 0.16
rpoC 763633 c.264T>C synonymous_variant 0.21
rpoC 763660 c.291T>G synonymous_variant 0.19
rpoC 763696 c.327T>C synonymous_variant 0.15
rpoC 763699 c.330G>C synonymous_variant 0.15
rpoC 763702 c.333C>G synonymous_variant 0.15
rpoC 763708 c.339G>C synonymous_variant 0.14
rpoC 763709 c.340C>T synonymous_variant 0.14
rpoC 763714 c.345G>C synonymous_variant 0.14
rpoC 763717 c.348T>C synonymous_variant 0.14
rpoC 763726 c.357C>T synonymous_variant 0.14
rpoC 763741 c.372C>T synonymous_variant 0.15
rpoC 763858 c.489A>G synonymous_variant 0.19
rpoC 763861 c.492C>T synonymous_variant 0.19
rpoC 763867 c.498C>T synonymous_variant 0.19
rpoC 763872 p.Gly168Ala missense_variant 0.19
rpoC 763876 p.Glu169Asp missense_variant 0.19
rpoC 763879 c.510A>G synonymous_variant 0.2
rpoC 763891 c.522G>C synonymous_variant 0.23
rpoC 763894 c.525A>G synonymous_variant 0.25
rpoC 763900 c.531G>C synonymous_variant 0.25
rpoC 763903 c.534G>A synonymous_variant 0.27
rpoC 763925 p.Ala186Lys missense_variant 0.18
rpoC 763930 c.561G>A synonymous_variant 0.18
rpoC 763940 p.Ala191Ser missense_variant 0.15
rpoC 763945 c.576T>C synonymous_variant 0.18
rpoC 763947 p.Ala193Val missense_variant 0.18
rpoC 763951 c.582G>C synonymous_variant 0.18
rpoC 763960 c.591T>G synonymous_variant 0.2
rpoC 763963 c.594C>T synonymous_variant 0.2
rpoC 763987 c.618C>T synonymous_variant 0.17
rpoC 763991 p.Ile208Leu missense_variant 0.17
rpoC 764472 p.Asn368Ser missense_variant 0.18
rpoC 764626 c.1257C>T synonymous_variant 0.22
rpoC 764632 c.1263T>C synonymous_variant 0.22
rpoC 764650 c.1281G>T synonymous_variant 0.18
rpoC 764662 c.1293G>C synonymous_variant 0.18
rpoC 764677 c.1308C>G synonymous_variant 0.25
rpoC 764719 c.1350G>A synonymous_variant 0.38
rpoC 764746 c.1377G>T synonymous_variant 0.4
rpoC 764752 c.1383G>C synonymous_variant 0.4
rpoC 764758 c.1389C>G synonymous_variant 0.3
rpoC 764764 c.1395T>C synonymous_variant 0.27
rpoC 764800 c.1431G>A synonymous_variant 0.2
rpoC 764803 c.1434C>T synonymous_variant 0.2
rpoC 764809 c.1440C>T synonymous_variant 0.2
rpoC 764815 c.1446A>G synonymous_variant 0.27
rpoC 764827 c.1458G>C synonymous_variant 0.25
rpoC 764858 c.1489T>C synonymous_variant 0.36
rpoC 764869 c.1500C>T synonymous_variant 0.36
rpoC 764878 c.1509C>G synonymous_variant 0.33
rpoC 764887 c.1518G>C synonymous_variant 0.36
rpoC 764888 c.1519T>C synonymous_variant 0.36
rpoC 764911 c.1542A>G synonymous_variant 0.29
rpoC 764912 p.Met515Gln missense_variant 0.29
rpoC 764923 c.1554A>G synonymous_variant 0.22
rpoC 764935 c.1566T>C synonymous_variant 0.21
rpoC 764948 c.1579T>C synonymous_variant 0.22
rpoC 764968 c.1599T>C synonymous_variant 0.17
rpoC 765886 c.2517C>G synonymous_variant 0.17
rpoC 765892 c.2523T>C synonymous_variant 0.15
rpoC 765898 c.2529C>T synonymous_variant 0.15
rpoC 765934 c.2565C>T synonymous_variant 0.14
rpoC 765937 c.2568T>C synonymous_variant 0.15
rpoC 765940 c.2571A>T synonymous_variant 0.15
rpoC 765946 c.2577C>T synonymous_variant 0.15
rpoC 765947 c.2578T>C synonymous_variant 0.15
rpoC 765952 c.2583G>C synonymous_variant 0.15
rpoC 765962 c.2593T>C synonymous_variant 0.15
rpoC 765979 c.2610C>G synonymous_variant 0.14
rpoC 765982 c.2613C>T synonymous_variant 0.15
rpoC 767023 c.3654C>T synonymous_variant 0.17
rpoC 767035 c.3666G>C synonymous_variant 0.15
rpoC 767098 c.3729T>C synonymous_variant 0.18
rpoC 767104 c.3735C>G synonymous_variant 0.18
rpoC 767106 p.Asn1246Met missense_variant 0.19
rpoC 767119 c.3750A>G synonymous_variant 0.18
rpoC 767155 c.3786C>G synonymous_variant 0.18
rpoC 767162 p.Asn1265Ala missense_variant 0.18
mmpL5 775794 p.Ala896Val missense_variant 0.25
mmpL5 775835 c.2646C>A synonymous_variant 0.15
mmpL5 775865 c.2616T>C synonymous_variant 0.17
mmpL5 775885 p.Ile866Leu missense_variant 0.18
mmpL5 775886 c.2595A>T synonymous_variant 0.18
mmpL5 775889 c.2592C>G synonymous_variant 0.18
mmpL5 775905 p.Lys859Arg missense_variant 0.14
mmpL5 775909 p.Leu858Ile missense_variant 0.14
mmpL5 775916 c.2565T>C synonymous_variant 0.2
mmpL5 775955 p.Ile842Val missense_variant 0.12
mmpL5 775961 c.2520C>G synonymous_variant 0.2
mmpL5 775981 p.Leu834Met missense_variant 0.16
mmpL5 776100 p.Thr794Ile missense_variant 0.13
mmpL5 776182 p.Asp767Asn missense_variant 0.2
mmpL5 777584 p.Tyr299* stop_gained 0.25
mmpL5 777692 c.789C>T synonymous_variant 0.17
mmpL5 777695 c.786G>T synonymous_variant 0.17
mmpL5 778606 c.-126C>T upstream_gene_variant 0.17
mmpR5 779096 p.Ala36Glu missense_variant 0.2
mmpR5 779294 p.Ala102Asp missense_variant 0.17
mmpR5 779374 p.Pro129Thr missense_variant 0.29
rpsL 781553 c.-7C>T upstream_gene_variant 0.15
rpsL 781580 c.21G>T synonymous_variant 0.17
rpsL 781595 c.36T>C synonymous_variant 0.15
rpsL 781598 c.39G>C synonymous_variant 0.15
rpsL 781605 p.Ile16Val missense_variant 0.14
rpsL 781608 p.Ser17Ala missense_variant 0.14
rpsL 781616 c.57C>G synonymous_variant 0.15
rpsL 781628 c.69T>C synonymous_variant 0.14
rpsL 781631 c.72G>C synonymous_variant 0.15
rpsL 781652 c.93T>C synonymous_variant 0.12
rpsL 781658 c.99A>G synonymous_variant 0.12
rpsL 781682 c.123T>C synonymous_variant 0.12
rplC 800612 c.-197A>G upstream_gene_variant 0.43
rplC 800618 c.-191T>C upstream_gene_variant 0.44
rplC 800633 c.-176T>C upstream_gene_variant 0.42
rplC 800639 c.-170C>T upstream_gene_variant 0.42
rplC 800645 c.-164C>G upstream_gene_variant 0.38
rplC 800648 c.-161A>C upstream_gene_variant 0.36
rplC 800651 c.-158G>C upstream_gene_variant 0.33
rplC 800678 c.-131C>T upstream_gene_variant 0.2
rplC 800684 c.-125G>A upstream_gene_variant 0.14
rplC 800693 c.-116A>C upstream_gene_variant 0.14
rplC 800702 c.-107G>C upstream_gene_variant 0.13
rplC 800703 c.-106T>C upstream_gene_variant 0.13
rplC 800715 c.-94A>C upstream_gene_variant 0.13
rplC 800720 c.-89T>C upstream_gene_variant 0.13
rplC 800723 c.-86C>G upstream_gene_variant 0.12
rplC 800855 p.Val16Ala missense_variant 0.17
rplC 801070 p.Asp88Tyr missense_variant 0.22
rplC 801381 c.573G>T synonymous_variant 0.25
Rv1258c 1406686 p.Val219Ile missense_variant 1.0
Rv1258c 1406761 p.Glu194* stop_gained 0.25
embR 1416727 c.621G>T synonymous_variant 0.18
embR 1416785 p.Ser188Ile missense_variant 0.13
embR 1416954 p.Glu132* stop_gained 0.18
embR 1417043 p.Arg102Leu missense_variant 0.14
atpE 1460982 c.-63G>T upstream_gene_variant 0.14
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471798 n.-48G>T upstream_gene_variant 0.4
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.5
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.43
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.43
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.5
rrs 1471979 n.134T>C non_coding_transcript_exon_variant 0.5
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.57
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.33
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.25
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.2
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.27
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.33
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.33
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.33
rrs 1472301 n.456C>T non_coding_transcript_exon_variant 0.22
rrs 1472324 n.479G>T non_coding_transcript_exon_variant 0.21
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.21
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.27
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.35
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.57
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.57
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.54
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.43
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.23
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.23
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.23
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.23
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.25
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.25
rrs 1472859 n.1014G>C non_coding_transcript_exon_variant 0.25
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.25
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.44
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.44
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.5
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.5
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.5
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.5
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.44
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.36
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.36
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.27
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.18
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.18
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.44
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.44
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.22
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.25
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.25
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.29
rrl 1473814 n.157A>C non_coding_transcript_exon_variant 0.29
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.29
rrl 1473816 n.159C>G non_coding_transcript_exon_variant 0.29
rrl 1473828 n.171G>C non_coding_transcript_exon_variant 0.29
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.29
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 0.29
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.29
rrl 1473847 n.190G>T non_coding_transcript_exon_variant 0.29
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.12
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.13
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.21
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.29
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.4
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.4
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.27
rrl 1474561 n.904G>T non_coding_transcript_exon_variant 0.33
rrl 1474709 n.1053delT non_coding_transcript_exon_variant 0.25
rrl 1474714 n.1058delT non_coding_transcript_exon_variant 0.25
rrl 1474734 n.1077G>A non_coding_transcript_exon_variant 0.25
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.29
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.22
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.27
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.31
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.23
rrl 1475192 n.1535C>T non_coding_transcript_exon_variant 0.2
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 0.18
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.18
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 0.18
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.18
rrl 1475221 n.1564C>G non_coding_transcript_exon_variant 0.18
rrl 1475286 n.1629T>C non_coding_transcript_exon_variant 0.22
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.25
rrl 1475296 n.1639G>T non_coding_transcript_exon_variant 0.4
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.58
rrl 1475343 n.1686A>G non_coding_transcript_exon_variant 0.6
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.75
rrl 1475358 n.1701T>C non_coding_transcript_exon_variant 0.75
rrl 1475363 n.1706C>T non_coding_transcript_exon_variant 0.75
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.75
rrl 1475380 n.1723C>A non_coding_transcript_exon_variant 0.75
rrl 1475381 n.1724G>T non_coding_transcript_exon_variant 0.75
rrl 1475382 n.1725A>C non_coding_transcript_exon_variant 0.75
rrl 1475395 n.1738T>G non_coding_transcript_exon_variant 0.67
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 0.67
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 0.67
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.7
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.64
rrl 1475428 n.1771G>T non_coding_transcript_exon_variant 0.2
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.6
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.57
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.5
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 0.5
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.5
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.57
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.5
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.4
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.38
rrl 1475753 n.2096C>T non_coding_transcript_exon_variant 0.56
rrl 1475759 n.2102C>T non_coding_transcript_exon_variant 0.56
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.56
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.56
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.56
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.56
rrl 1475775 n.2118G>A non_coding_transcript_exon_variant 0.5
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.4
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.42
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.4
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.25
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.25
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.29
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.29
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.31
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.31
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.33
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.5
rrl 1476056 n.2399G>A non_coding_transcript_exon_variant 0.33
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.38
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.42
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.3
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.3
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.3
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.3
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.33
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.33
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.67
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.67
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.67
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.73
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.67
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.67
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.61
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.56
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.56
rrl 1476339 n.2682G>T non_coding_transcript_exon_variant 0.15
rrl 1476419 n.2762G>T non_coding_transcript_exon_variant 0.15
rrl 1476438 n.2781G>T non_coding_transcript_exon_variant 0.17
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.62
rrl 1476583 n.2926G>C non_coding_transcript_exon_variant 0.58
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.64
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.6
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.6
rpsA 1833832 c.291G>A synonymous_variant 0.18
rpsA 1833838 c.297G>C synonymous_variant 0.18
rpsA 1833841 c.300C>G synonymous_variant 0.18
rpsA 1833847 c.306C>G synonymous_variant 0.2
rpsA 1833856 c.315A>G synonymous_variant 0.18
rpsA 1833862 c.321G>T synonymous_variant 0.18
rpsA 1833928 c.387G>C synonymous_variant 0.19
rpsA 1833970 c.429G>C synonymous_variant 0.16
rpsA 1834451 c.910T>C synonymous_variant 0.38
rpsA 1834456 c.915T>G synonymous_variant 0.38
rpsA 1834468 c.927A>G synonymous_variant 0.33
rpsA 1834489 c.948T>C synonymous_variant 0.36
rpsA 1834513 c.972C>G synonymous_variant 0.42
rpsA 1834520 p.Ala327Ser missense_variant 0.38
rpsA 1834528 c.987T>C synonymous_variant 0.42
rpsA 1834540 c.999G>C synonymous_variant 0.38
rpsA 1834543 c.1002C>G synonymous_variant 0.45
rpsA 1834546 c.1005T>C synonymous_variant 0.42
rpsA 1834554 c.1014_1015delTG frameshift_variant 0.36
rpsA 1834558 c.1017_1018insAG frameshift_variant 0.36
rpsA 1834606 c.1065C>T synonymous_variant 0.15
rpsA 1834609 c.1068T>C synonymous_variant 0.15
rpsA 1834705 c.1164C>G synonymous_variant 0.11
rpsA 1834732 c.1191T>C synonymous_variant 0.17
rpsA 1834738 p.Glu399Asp missense_variant 0.18
rpsA 1834753 c.1212T>C synonymous_variant 0.18
rpsA 1834759 c.1218A>C synonymous_variant 0.15
rpsA 1834765 p.Glu408Asp missense_variant 0.14
rpsA 1834775 p.Ala412Thr missense_variant 0.14
rpsA 1834786 c.1245A>G synonymous_variant 0.15
rpsA 1834789 c.1248T>C synonymous_variant 0.14
rpsA 1834810 c.1269C>T synonymous_variant 0.16
tlyA 1917978 c.39G>A synonymous_variant 0.14
tlyA 1918190 p.Arg84Gln missense_variant 0.17
tlyA 1918242 c.303G>A synonymous_variant 0.18
tlyA 1918520 p.Pro194Leu missense_variant 0.14
ndh 2101817 p.Thr409Asn missense_variant 0.2
ndh 2102917 c.126G>A synonymous_variant 0.33
ndh 2103123 c.-81G>T upstream_gene_variant 0.5
katG 2154245 p.Glu623Lys missense_variant 0.18
katG 2154248 p.Pro622Thr missense_variant 0.18
katG 2154455 p.Glu553* stop_gained 0.2
katG 2154806 p.Leu436Met missense_variant 0.14
katG 2156404 c.-293G>T upstream_gene_variant 0.18
katG 2156447 c.-336C>G upstream_gene_variant 0.13
katG 2156539 c.-428G>T upstream_gene_variant 0.14
katG 2156558 c.-447G>T upstream_gene_variant 0.17
katG 2156568 c.-457G>T upstream_gene_variant 0.17
PPE35 2168354 c.2259G>A synonymous_variant 0.13
PPE35 2168742 p.Gly624Val missense_variant 0.17
PPE35 2169133 p.Ala494Ser missense_variant 0.13
PPE35 2169310 p.Gly435Cys missense_variant 0.18
PPE35 2169797 c.816G>T synonymous_variant 0.13
Rv1979c 2223293 c.-129A>G upstream_gene_variant 0.14
pncA 2289780 c.-539C>A upstream_gene_variant 0.25
kasA 2517941 c.-174C>G upstream_gene_variant 0.27
kasA 2517950 c.-165C>G upstream_gene_variant 0.27
kasA 2517962 c.-153C>G upstream_gene_variant 0.33
kasA 2517968 c.-147T>C upstream_gene_variant 0.3
kasA 2517974 c.-141T>C upstream_gene_variant 0.22
kasA 2517989 c.-126T>C upstream_gene_variant 0.22
kasA 2518014 c.-101G>T upstream_gene_variant 0.25
kasA 2518564 c.450C>T synonymous_variant 0.13
kasA 2518567 c.453G>C synonymous_variant 0.14
kasA 2518570 c.456G>A synonymous_variant 0.14
kasA 2518573 c.459G>C synonymous_variant 0.14
kasA 2518574 p.Ile154Val missense_variant 0.14
kasA 2518579 c.465T>C synonymous_variant 0.15
kasA 2518582 c.468G>C synonymous_variant 0.15
kasA 2518583 p.Gln157Glu missense_variant 0.15
kasA 2518588 c.474T>C synonymous_variant 0.15
kasA 2518603 c.489G>C synonymous_variant 0.14
kasA 2518606 c.492G>C synonymous_variant 0.15
kasA 2518609 p.Met165Ile missense_variant 0.15
kasA 2518612 c.498C>G synonymous_variant 0.15
kasA 2518615 c.501G>C synonymous_variant 0.13
kasA 2518618 c.504G>T synonymous_variant 0.13
kasA 2518642 c.528A>G synonymous_variant 0.14
kasA 2518644 p.Ala177Gly missense_variant 0.14
kasA 2518657 c.543G>A synonymous_variant 0.15
kasA 2518711 c.597A>G synonymous_variant 0.12
kasA 2518715 p.Pro201Ala missense_variant 0.12
kasA 2518732 c.618C>G synonymous_variant 0.17
kasA 2518747 c.633C>G synonymous_variant 0.15
kasA 2518756 c.642G>T synonymous_variant 0.21
kasA 2518759 c.645C>G synonymous_variant 0.16
kasA 2518780 p.Glu222Asp missense_variant 0.16
kasA 2518783 c.669T>G synonymous_variant 0.18
kasA 2518787 p.Arg225Gly missense_variant 0.18
kasA 2518792 c.678C>G synonymous_variant 0.19
kasA 2518795 c.681C>G synonymous_variant 0.18
kasA 2518798 c.684G>T synonymous_variant 0.19
kasA 2518813 c.699C>T synonymous_variant 0.19
kasA 2518816 c.702C>T synonymous_variant 0.21
kasA 2518822 c.708C>G synonymous_variant 0.27
kasA 2518825 c.711T>C synonymous_variant 0.27
kasA 2518828 c.714G>C synonymous_variant 0.27
kasA 2518849 c.735G>C synonymous_variant 0.2
kasA 2518853 p.Leu247Ile missense_variant 0.2
kasA 2519158 c.1044C>A synonymous_variant 0.18
kasA 2519201 p.Arg363Ser missense_variant 0.22
kasA 2519215 c.1101C>A synonymous_variant 0.18
kasA 2519225 p.Leu371Met missense_variant 0.18
eis 2714171 p.Ala388Ser missense_variant 0.2
eis 2714190 p.Gln381His missense_variant 0.2
eis 2715222 c.111G>T synonymous_variant 0.2
eis 2715320 p.Leu5Met missense_variant 0.18
pepQ 2859798 c.621G>T synonymous_variant 0.17
pepQ 2859978 p.Cys147* stop_gained 0.15
ribD 2986935 p.Asp33Tyr missense_variant 0.15
ribD 2987507 c.669G>T synonymous_variant 0.22
ribD 2987532 p.Gly232Trp missense_variant 0.2
Rv2752c 3065825 p.Pro123Thr missense_variant 0.33
thyX 3068032 c.-87G>T upstream_gene_variant 0.2
thyA 3074650 c.-179G>T upstream_gene_variant 0.2
ald 3086788 c.-32T>C upstream_gene_variant 0.5
ald 3087482 c.663G>T synonymous_variant 0.18
ald 3087912 p.Glu365Lys missense_variant 0.4
fbiD 3339448 p.Val111Leu missense_variant 0.18
Rv3083 3448878 c.375C>A synonymous_variant 0.22
Rv3083 3449409 c.906C>T synonymous_variant 0.15
Rv3083 3449812 p.Asp437Tyr missense_variant 0.25
Rv3083 3449856 p.Met451Ile missense_variant 0.2
Rv3083 3449990 c.1487G>T stop_lost&splice_region_variant 0.15
fprA 3474051 c.45G>A synonymous_variant 0.2
Rv3236c 3612693 c.424C>A synonymous_variant 0.4
Rv3236c 3612813 p.Thr102Ala missense_variant 0.3
Rv3236c 3612859 c.258G>T synonymous_variant 0.22
Rv3236c 3612935 p.Gly61Val missense_variant 0.2
fbiA 3640667 p.Ser42Ile missense_variant 0.13
fbiA 3640689 p.Asp49Glu missense_variant 0.13
fbiB 3640758 c.-777G>C upstream_gene_variant 0.12
fbiA 3640784 p.Gln81Arg missense_variant 0.12
fbiA 3641060 p.Trp173Leu missense_variant 0.17
fbiB 3641990 p.Met152Ile missense_variant 0.17
fbiB 3642014 p.Gln160His missense_variant 0.15
fbiB 3642098 c.564G>T synonymous_variant 0.22
fbiB 3642783 p.Asp417Asn missense_variant 0.15
alr 3840451 p.Gly324Trp missense_variant 0.33
alr 3841201 p.Ala74Ser missense_variant 0.17
alr 3841232 c.189G>T synonymous_variant 0.25
rpoA 3877803 c.705G>C synonymous_variant 0.12
rpoA 3877848 c.660C>T synonymous_variant 0.14
rpoA 3877856 c.652T>C synonymous_variant 0.14
rpoA 3877860 c.648C>T synonymous_variant 0.16
rpoA 3877875 c.633T>C synonymous_variant 0.17
rpoA 3877881 c.627G>C synonymous_variant 0.18
rpoA 3877887 c.621G>C synonymous_variant 0.18
rpoA 3877893 c.615C>T synonymous_variant 0.17
rpoA 3877905 c.603A>G synonymous_variant 0.15
rpoA 3877908 c.600T>C synonymous_variant 0.16
rpoA 3877920 c.588G>C synonymous_variant 0.19
rpoA 3877926 c.582G>C synonymous_variant 0.2
rpoA 3877962 c.546G>C synonymous_variant 0.13
rpoA 3877971 p.Asp179Glu missense_variant 0.12
rpoA 3878373 c.135G>A synonymous_variant 0.2
rpoA 3878641 c.-135delG upstream_gene_variant 0.21
ddn 3986645 c.-199G>A upstream_gene_variant 0.25
ddn 3986648 c.-196C>G upstream_gene_variant 0.25
clpC1 4038589 p.Arg706Ser missense_variant 0.14
clpC1 4038596 c.2109A>G synonymous_variant 0.14
clpC1 4038631 c.2074C>A synonymous_variant 0.14
clpC1 4038640 p.Asp689Asn missense_variant 0.14
clpC1 4038647 c.2058T>C synonymous_variant 0.2
clpC1 4038650 c.2055C>T synonymous_variant 0.2
clpC1 4038658 p.Lys683Gln missense_variant 0.2
clpC1 4038661 p.Ser682Thr missense_variant 0.21
clpC1 4038662 c.2043T>C synonymous_variant 0.21
clpC1 4038671 c.2034T>G synonymous_variant 0.25
clpC1 4038677 p.Pro676Ala missense_variant 0.27
clpC1 4038683 c.2022T>C synonymous_variant 0.36
clpC1 4038704 c.2001T>C synonymous_variant 0.42
clpC1 4038707 c.1998C>G synonymous_variant 0.42
clpC1 4038710 c.1995G>C synonymous_variant 0.42
clpC1 4038713 c.1992T>C synonymous_variant 0.42
clpC1 4038755 c.1950G>C synonymous_variant 0.5
clpC1 4038773 c.1932T>C synonymous_variant 0.5
clpC1 4038779 c.1926C>G synonymous_variant 0.44
clpC1 4038782 c.1923G>C synonymous_variant 0.5
clpC1 4038790 c.1915C>T synonymous_variant 0.5
clpC1 4038795 p.Ser637Thr missense_variant 0.5
clpC1 4038812 c.1893T>C synonymous_variant 0.57
clpC1 4038815 c.1890G>T synonymous_variant 0.57
clpC1 4038830 c.1875C>T synonymous_variant 0.5
clpC1 4038836 c.1869G>C synonymous_variant 0.29
clpC1 4038845 c.1858_1860delTCGinsAGC synonymous_variant 0.25
clpC1 4038856 p.Lys617Glu missense_variant 0.29
clpC1 4038860 c.1845G>C synonymous_variant 0.29
clpC1 4038989 c.1716T>C synonymous_variant 0.25
clpC1 4038997 c.1708T>C synonymous_variant 0.25
clpC1 4039001 p.Asn568Ala missense_variant 0.25
clpC1 4039022 c.1683A>G synonymous_variant 0.2
clpC1 4039064 c.1641C>T synonymous_variant 0.21
clpC1 4039067 c.1638G>C synonymous_variant 0.21
clpC1 4039079 c.1626C>G synonymous_variant 0.21
clpC1 4039085 c.1620A>G synonymous_variant 0.21
clpC1 4039091 c.1614G>C synonymous_variant 0.21
clpC1 4039097 c.1608G>C synonymous_variant 0.21
clpC1 4039112 c.1593C>G synonymous_variant 0.2
clpC1 4039118 c.1587C>G synonymous_variant 0.14
clpC1 4039121 c.1584T>C synonymous_variant 0.14
clpC1 4039169 p.Glu512Asp missense_variant 0.12
clpC1 4039291 p.Asp472Tyr missense_variant 0.2
clpC1 4039335 p.Leu457Pro missense_variant 0.18
clpC1 4039718 c.987C>G synonymous_variant 0.12
clpC1 4039724 c.981A>G synonymous_variant 0.16
clpC1 4039733 c.972G>C synonymous_variant 0.13
clpC1 4039751 c.954A>G synonymous_variant 0.13
clpC1 4039757 c.948A>G synonymous_variant 0.13
clpC1 4039760 c.945T>C synonymous_variant 0.12
clpC1 4039766 c.939T>C synonymous_variant 0.12
clpC1 4039769 c.936C>G synonymous_variant 0.12
clpC1 4039775 c.930G>C synonymous_variant 0.12
clpC1 4039778 c.927A>G synonymous_variant 0.12
clpC1 4039787 p.Ser306Cys missense_variant 0.12
clpC1 4039817 c.888A>T synonymous_variant 0.15
clpC1 4039820 c.885T>C synonymous_variant 0.15
clpC1 4039823 c.882T>A synonymous_variant 0.15
clpC1 4039831 c.874T>C synonymous_variant 0.18
clpC1 4039832 c.873C>G synonymous_variant 0.18
clpC1 4039850 c.855T>C synonymous_variant 0.12
clpC1 4039865 c.840T>C synonymous_variant 0.13
clpC1 4039979 c.726C>G synonymous_variant 0.15
clpC1 4039991 c.714G>C synonymous_variant 0.14
clpC1 4040015 c.690G>C synonymous_variant 0.17
clpC1 4040021 c.684A>C synonymous_variant 0.15
clpC1 4040024 c.681A>G synonymous_variant 0.15
clpC1 4040042 c.663C>T synonymous_variant 0.17
clpC1 4040057 c.648C>T synonymous_variant 0.18
clpC1 4040087 c.618G>C synonymous_variant 0.12
clpC1 4040090 p.Ser205Cys missense_variant 0.12
clpC1 4040679 p.Ala9Val missense_variant 0.14
clpC1 4040745 c.-41G>T upstream_gene_variant 0.25
panD 4044258 c.24G>A synonymous_variant 0.25
embC 4241017 c.1155T>C synonymous_variant 0.11
embC 4241023 c.1161T>G synonymous_variant 0.13
embC 4241024 p.Val388Phe missense_variant 0.18
embC 4241035 c.1173G>C synonymous_variant 0.12
embC 4241050 c.1188T>G synonymous_variant 0.11
embC 4241056 c.1194C>A synonymous_variant 0.29
embC 4241071 c.1209C>A synonymous_variant 0.14
embC 4241072 p.Leu404Val missense_variant 0.14
embC 4241107 c.1245G>C synonymous_variant 0.17
embC 4241109 p.Ala416Gly missense_variant 0.17
embC 4241116 c.1254C>G synonymous_variant 0.17
embA 4242361 c.-872C>T upstream_gene_variant 0.25
embC 4242977 p.Leu1039Met missense_variant 0.22
embA 4243066 c.-167C>A upstream_gene_variant 0.5
embA 4243197 c.-36C>T upstream_gene_variant 0.29
embA 4243293 p.Gly21* stop_gained 0.25
embA 4243301 c.69G>T synonymous_variant 0.25
embA 4243315 p.Cys28Phe missense_variant 0.22
embA 4243327 p.Pro32Gln missense_variant 0.29
embA 4244964 p.Ala578Ser missense_variant 0.4
embA 4244991 p.Val587Phe missense_variant 0.33
embB 4247624 p.Pro371Thr missense_variant 0.25
embB 4248475 c.1962G>T synonymous_variant 0.15
embB 4248619 c.2106G>T synonymous_variant 0.17
embB 4249166 p.Gly885Cys missense_variant 0.25
embB 4249734 p.Pro1074Leu missense_variant 0.2
embB 4249753 p.Leu1080Phe missense_variant 0.25
aftB 4268701 p.Gly46Arg missense_variant 0.17
ubiA 4269276 p.Phe186Leu missense_variant 0.25
ubiA 4269353 p.Ala161Ser missense_variant 0.18
aftB 4269375 c.-539G>A upstream_gene_variant 0.33
aftB 4269378 c.-542C>A upstream_gene_variant 0.22
aftB 4269447 c.-611C>A upstream_gene_variant 0.18
ubiA 4269714 p.Leu40Phe missense_variant 0.4
aftB 4269816 c.-980G>T upstream_gene_variant 0.29
ethA 4326289 c.1185C>A synonymous_variant 0.15
ethA 4328261 c.-788C>A upstream_gene_variant 0.18
ethA 4328322 c.-849G>T upstream_gene_variant 0.2