Rv3596c - c.1950G>C


Drug resistance types
119 Sensitive 8 RR-TB 105 HR-TB 24 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 113 Other
lineage Counts
lineage Count
lineage4 96
lineage4.9 85
La1 1
77
La1.8.1 6
lineage4.6.2.2 3
lineage4.1.2.1 18
lineage3 9
lineage4.8 5
lineage4.5 2
lineage2.2.1 30
La1.2 1
lineage4.3.3 6
lineage4.3.4.1 1
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage5.2 4
lineage6.1.3 1
lineage2.2.2 1
lineage2 1
lineage4.4.1.1 2
La1.4 1
La1.7.1 1
lineage3.1.3 1
lineage1.2.1.2 1
lineage4.1 2
lineage6.3;lineage4.9;lineage2.1 1
lineage3;lineage2.1 1
lineage2.1 3
lineage4.3.4.2.1 1
lineage4;lineage2 1
lineage4;lineage1.1.2 1
lineage4.1.1.2 1
lineage4.1.1.3 1
lineage1.1.2 2
lineage5.1.4 1
lineage1.1.1 1
lineage4.9;lineage4.2.1 1
lineage4.9;lineage2.1 1
lineage4.2.2.2 1
lineage1.1 1
lineage2.2.1.1 1
lineage3.1 2
lineage4.3.2.1 1
lineage4.1.2 2
lineage4.1.2.1;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 382
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR137286 Sensitive lineage4 None
ERR3283058 Other lineage4.9 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283008 Other lineage4.9 None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349265 Sensitive lineage4 None
ERR3468544 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR373947 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797024 Other lineage4.9 None
ERR3797061 Other None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797060 Other La1.8.1 None
ERR3797014 Other None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797080 HR-TB lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR400320 Sensitive lineage4 None
ERR4024991 Other None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR4188247 HR-TB None
ERR4188350 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR4796254 Sensitive lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4797313 HR-TB None
ERR4797474 Other None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4799378 Sensitive lineage4 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4811031 Sensitive lineage4.5 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR6198317 Other La1.2 None
ERR4812155 Sensitive None
ERR5908228 Other lineage4.3.3 None
ERR4811030 Sensitive None
ERR5917710 Other lineage4.1.2.1 None
ERR6358979 Other None
ERR6358951 HR-TB lineage4 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6866022 Other None
ERR6865513 Other lineage4.1.2.1 None
ERR6865502 Sensitive lineage4 None
ERR6866547 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR736835 HR-TB None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR751326 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
SRR21732954 Sensitive lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR8976043 HR-TB None
ERR9119499 MDR-TB lineage5.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119096 Other lineage4.3.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR9896147 Sensitive lineage2.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR069989 HR-TB lineage2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR1062919 HR-TB lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1173568 Other lineage4.9 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173777 Other lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR13861332 Other lineage4.9 None
SRR13837642 RR-TB lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861566 Other lineage4.9 None
SRR15014682 MDR-TB lineage4.8 None
SRR1791747 Other La1.8.1 None
SRR1640750 HR-TB None
SRR17658565 Other lineage3 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR1791696 Other La1.8.1 None
ERR8025636 Pre-XDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR20632814 Sensitive lineage4 None
SRR18913742 Sensitive lineage3.1.3 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR2101360 MDR-TB lineage4.1.2.1 None
SRR22424787 Sensitive lineage4.9 None
ERR9806975 Pre-XDR-TB lineage2.2.1 None
SRR8692824 Other lineage4.9 None
SRR8692790 RR-TB lineage4 None
SRR8692879 HR-TB lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR8692807 Other lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692905 HR-TB None
SRR8692800 Other lineage4 None
SRR8692882 HR-TB lineage4.9 None
ERR176751 HR-TB None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR8692887 Other None
SRR23961529 Other lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4 None
ERR4813861 Other lineage4.3.3 None
SRR3675472 Sensitive lineage4.9 None
ERR4815296 Sensitive lineage4 None
SRR3675477 Other lineage4.9 None
SRR3675464 HR-TB lineage4.1 None
ERR161033 HR-TB None
SRR3675482 HR-TB None
ERR4815310 Other None
SRR3675209 Sensitive lineage4.9 None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR4814639 HR-TB lineage4 None
ERR4815471 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4814690 Sensitive lineage2.2.1 None
SRR3675247 Other lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675229 Other lineage4 None
ERR702405 Sensitive lineage2.1 None
SRR3675234 Other None
SRR3675249 Sensitive lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675318 Other lineage4.9 None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
ERR4815550 Other lineage4 None
SRR3675527 RR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675547 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675545 HR-TB None
ERR212121 HR-TB None
SRR3675558 HR-TB None
SRR3675553 Sensitive lineage4.9 None
ERR4816466 HR-TB None
ERR4816470 Other lineage3 None
ERR212138 HR-TB lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR216965 HR-TB lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR4817667 HR-TB lineage4.8 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR3275196 Other lineage2.2.1 nl
ERR4818252 Other lineage4.1.1.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR3275215 Other lineage4.1.2.1 nl
ERR4818710 Sensitive lineage4.9 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513283 Other lineage5.1.4 None
ERR2513259 Other lineage3 None
ERR3275220 Other lineage3 nl
ERR2509673 Other lineage2.2.1 None
ERR4818561 HR-TB lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4818607 Sensitive lineage4.9 None
SRR5341366 Sensitive lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341461 Sensitive lineage4 None
SRR5341396 Other lineage4 None
SRR5341387 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341455 Sensitive lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819546 HR-TB lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341323 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341345 Sensitive lineage4.9 None
ERR2446563 Other lineage2.2.1 nl
SRR5341467 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR6046117 RR-TB lineage4.9 None
ERR2446118 Other lineage4.1.2.1 nl
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR5341469 Other lineage4 None
ERR2693231 Other None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693239 HR-TB None
ERR2446144 Other lineage3 nl
SRR6044875 HR-TB lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6046250 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045952 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045976 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6045264 Sensitive lineage2.2.1 None
SRR6046385 Other lineage4.9 None
SRR6325442 HR-TB None
SRR6046245 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR278594 HR-TB None
SRR6325448 HR-TB None
ERR2517489 Sensitive lineage4.1.2.1 nl
SRR6325444 HR-TB None
SRR6046514 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR6325447 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4832002 Pre-XDR-TB lineage2.1 None
SRR6511621 HR-TB None
ERR323036 HR-TB None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4872093 MDR-TB lineage5.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831638 Sensitive None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR294248 HR-TB None
ERR502510 Sensitive lineage4 None
SRR6831950 Other lineage4.3.3 None
SRR6981961 Sensitive lineage2.2.1 None
ERR502943 HR-TB None
ERR5311090 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR5311099 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
ERR5311081 HR-TB None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970980 Other lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971112 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR323055 HR-TB None
ERR323038 HR-TB None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR323085 Sensitive lineage4 None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR067712 HR-TB lineage4 None
ERR323108 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1035122 Sensitive None
ERR108471 HR-TB lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None