Rv0668 - c.117T>C


Drug resistance types
203 Sensitive 58 RR-TB 139 HR-TB 88 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 204 Other
lineage Counts
lineage Count
lineage4.9 289
lineage4.3.2.1 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.4.1.1 6
lineage4.8 12
M.canetti;lineage2.1;lineage4.9 24
lineage4.8.2;lineage4.9 1
lineage2.1;lineage4.9 6
lineage4.4.1.1.1 3
M.canetti;lineage4.9 6
lineage3;lineage4 1
lineage4.3.4.2.1 8
lineage2.2.1 43
La1.7;lineage4.9 11
lineage1.2.2.1;lineage4.4.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 7
La1.2.BCG 2
lineage1.2.1.2.1 1
lineage4.3.3 9
lineage1.1.2 2
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
lineage4.8;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage3 17
La1.7;M.canetti;lineage4.9 4
6
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.1.3 6
lineage4.1.2.1 19
lineage4.2;lineage4.9 2
lineage4.9;lineage7 4
La1.7.1 1
lineage4.7 2
lineage4.1.1.3;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.6.2.2 1
M.canetti;lineage4.6.4;lineage4.9 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1.2;lineage7 1
lineage4.5 3
lineage4.6.1.1 4
La1.7 2
La3;M.canetti;lineage4.9 2
lineage2.2.1.2 3
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
lineage4.6.4 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
La1.8.1 7
lineage4.4.1.2 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9.1 1
lineage1.2.2 1
lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2;lineage4 1
lineage2.2.1;lineage4.9 4
lineage3;lineage4.9 1
lineage2.2 3
lineage4.1.1.3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La1.2 1
La1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1;lineage4.9 1
lineage4.2.1 4
lineage2.1;lineage4.9;lineage6.3 2
lineage4 10
lineage1.1.1 2
lineage4.8.1 3
lineage4.1;lineage4.9 2
M.canetti;lineage4.9;lineage9 1
La3;lineage4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2.2 3
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 2
lineage4.4.2 3
lineage4.6.5 2
La3;lineage4.9 9
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 2
lineage4.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage3.1.1 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.X-unk4 1
La1.4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage1.1 1
lineage1.1.1;lineage4 1
La3;M.canetti;lineage3.1 1
lineage5.1.4 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.3 1
lineage4.2.2.2 2
lineage2.2;lineage4.9 1
M.canetti;lineage2.2 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.1.2;lineage4 1
La1.7;lineage4.3.4.1 1
lineage1.2.2.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.2.BCG;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 703
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6358951 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1175512 Sensitive lineage4.9 None
ERR11465627 Sensitive lineage4.3.4.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR13861332 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR11465511 Other lineage4.3.4.2.1 None
ERR373946 Sensitive lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675312 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR349296 Sensitive lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817069 RR-TB None
SRR5341387 Other lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR2509673 Other lineage2.2.1 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR7496523 Other lineage4.7 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR1640750 Other None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
SRR6045503 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR11465830 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4796577 HR-TB None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR29055611 Sensitive lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323066 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR7645906 Other lineage2.2.1 None
SRR3675222 Other La1.7 None
ERR369162 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR978765 RR-TB lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR13861224 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR502474 RR-TB lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR22424765 HR-TB lineage4.8 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR12708384 Sensitive lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR7755655 Other lineage4.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4188247 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR3675541 Sensitive lineage4.9 None
ERR5311077 Other La1.8.1 None
SRR3675387 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR21677886 Sensitive lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR12199453 Sensitive lineage1.2.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675585 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR369159 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797079 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR11465906 Sensitive lineage4.4.1.1 None
ERR3283055 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045832 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
ERR4818904 Other lineage4.8 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR10315558 Sensitive lineage2.2.1 None
ERR3275220 Other lineage3 nl
ERR4816610 Other lineage4.3.3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283028 Other La3;lineage4 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1175496 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4821143 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1238559 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675482 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675265 Other lineage4 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR15316595 RR-TB lineage4.4.2 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5341455 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046046 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR3797048 Other La3;lineage4.9 None
SRR7645899 Other lineage2.2.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4821119 Other lineage4.4.1.1 None
SRR3675292 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR2513259 Other lineage3 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR3675269 RR-TB lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR6359066 HR-TB lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR2446144 Other lineage3 nl
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR5341453 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR3797064 Other La3;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR6866639 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
SRR1180172 Other lineage2.2.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR5341308 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1180399 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR1173777 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR1181351 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4818110 Sensitive lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4815815 Sensitive lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR736831 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR867545 Other lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR1180996 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR14066533 Sensitive lineage1.1.1 None
ERR6359070 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR2517528 RR-TB lineage3 nl
SRR9971122 MDR-TB lineage4.8 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR1173281 Other lineage3 None
SRR3675502 Sensitive lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR16156804 Sensitive lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR926155 Sensitive lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR13861510 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR4816762 Sensitive lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180406 Sensitive lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SAMN02585910 Other lineage2.2.1 None
SRR6044875 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
ERR387051 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR11465833 Sensitive lineage4.3.2.1 None
SRR1166821 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816964 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR373945 Sensitive lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR5341330 Other lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR16156188 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816470 HR-TB lineage3 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502473 RR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR926161 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20969542 Other lineage4.4.2 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR4769436 Other La1.3 None
SRR1180977 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR13861528 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3797073 Other La1.8.1 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4821172 RR-TB lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702405 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR1181251 Other lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR108125 RR-TB lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR4798099 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4769508 RR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR926160 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR10315751 MDR-TB lineage4.8 None
SRR5341384 HR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1180420 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR6045219 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR5341460 Other lineage3 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR6359069 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6865513 Other lineage4.1.2.1 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR12708392 Other lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6511621 Sensitive lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6046564 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR978767 RR-TB lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
SRR13423544 Other lineage4.5 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR8692800 Sensitive lineage4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR363509 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None