ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR11465830
|
Sensitive
|
lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
ERR6358979
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
SRR3675502
|
Sensitive
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675441
|
RR-TB
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR373945
|
Other
|
lineage4.9
|
None
|
SRR13861224
|
Sensitive
|
lineage4.9
|
None
|
SRR3675507
|
RR-TB
|
lineage4.9
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR6046295
|
MDR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
SRR1238559
|
Other
|
lineage4.9
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
ERR702405
|
HR-TB
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR9119508
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR3675390
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR3675492
|
Other
|
La1.7;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
ERR11465833
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR3675487
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6325448
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
SRR6045548
|
Other
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR9119669
|
MDR-TB
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
SRR3675506
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4831839
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4811031
|
Other
|
lineage4.5
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
ERR3797085
|
Other
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR1166821
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR5818586
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR363498
|
Other
|
lineage4.9
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1035162
|
MDR-TB
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR14801759
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR11465714
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
ERR126600
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR3797073
|
Other
|
La1.8.1
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR8665994
|
RR-TB
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4818904
|
Other
|
lineage4.8
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR6325445
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675449
|
RR-TB
|
M.canetti;lineage4.9
|
None
|
SAMN02585910
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR069978
|
HR-TB
|
lineage2.2.2
|
None
|
ERR4024991
|
HR-TB
|
lineage4.8;lineage4.9
|
None
|
SRR3675539
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
SRR13423649
|
Other
|
lineage2.2.1
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR22424765
|
HR-TB
|
lineage4.8
|
None
|
ERR124652
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR323063
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR387051
|
RR-TB
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
SRR1181251
|
Other
|
lineage2.2.1
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311089
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR867545
|
Other
|
lineage4.9
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR323047
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR13861381
|
HR-TB
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR8692800
|
Sensitive
|
lineage4
|
None
|
SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR3797019
|
Other
|
La1.8.1
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11465802
|
Other
|
La1.7;lineage4.3.4.1
|
None
|
SRR5341460
|
Other
|
lineage3
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR1873393
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816551
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR349264
|
Other
|
lineage4.9
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1915481
|
Other
|
La1.2.BCG;lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
SRR6045399
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR2446144
|
Other
|
lineage3
|
nl
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR8975532
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR19295647
|
HR-TB
|
lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4596944
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR13861288
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR29055611
|
Sensitive
|
lineage4.9
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR1173568
|
Sensitive
|
lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR4797474
|
Other
|
lineage4.9
|
None
|
ERR11465627
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR278594
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR3275220
|
Other
|
lineage3
|
nl
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR4872102
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR4816964
|
HR-TB
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Other
|
lineage3
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4821119
|
Other
|
lineage4.4.1.1
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR926156
|
Other
|
lineage4.9
|
None
|
ERR3283031
|
Other
|
La3;lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6832787
|
Other
|
lineage2.2.1
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR1791696
|
RR-TB
|
La1.8.1
|
None
|
SRR3675269
|
RR-TB
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
ERR386953
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR2517528
|
RR-TB
|
lineage3
|
nl
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR5341308
|
HR-TB
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR3797063
|
Other
|
La3;lineage4.9
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1180996
|
Other
|
lineage4.9
|
None
|
SRR6511621
|
HR-TB
|
lineage4.9
|
None
|
SRR1181328
|
Other
|
lineage2.2.1
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
ERR323036
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR1035122
|
HR-TB
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR5311079
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR363490
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
SRR6044875
|
Other
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1162864
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
ERR11465906
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR3675222
|
Other
|
La1.7
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR11465711
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
ERR323041
|
MDR-TB
|
M.canetti;lineage2.1
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4798431
|
Other
|
lineage4.1;lineage4.9
|
None
|
SRR1173777
|
Sensitive
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR3675508
|
MDR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR736834
|
HR-TB
|
lineage4.9
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR473314
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR3675464
|
MDR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR13861528
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
ERR363453
|
Other
|
lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
ERR11466062
|
Sensitive
|
lineage4.9.1
|
None
|
SRR3675450
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR502889
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR1180172
|
RR-TB
|
lineage2.2.1
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR6866022
|
HR-TB
|
lineage4.8;lineage4.9
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
SRR6046594
|
Other
|
lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR323038
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
ERR369159
|
Other
|
lineage4.9
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
SRR6044815
|
RR-TB
|
lineage4.9
|
None
|
SRR5341418
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR12199453
|
Sensitive
|
lineage1.2.2
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
SRR6832249
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
ERR1023236
|
Other
|
lineage6.1.3
|
None
|
SRR13861332
|
Other
|
lineage4.9
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
ERR4188350
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
ERR502510
|
HR-TB
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
SRR3675312
|
Sensitive
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR7240492
|
MDR-TB
|
La1.7.1
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR3283021
|
MDR-TB
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
HR-TB
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Other
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR6045359
|
HR-TB
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR3675243
|
Other
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR6044952
|
Other
|
lineage4.9
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|