EBG00000313325 - n.535G>C
Drug resistance types
77 Sensitive
5 RR-TB
58 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 6 |
| lineage4.2.1 | 2 |
| lineage4.9 | 153 |
| lineage2.2.1 | 15 |
| lineage4.3.3 | 3 |
| La3;lineage4.9 | 8 |
| lineage2.2.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage5.1.2 | 1 |
| lineage4 | 5 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| 2 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.8 | 2 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.8.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage1.1.2 | 3 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La1.2.BCG | 2 |
| lineage3;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.6.5 | 2 |
| lineage4.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage6 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 257 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1019127 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR473332 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR5341425 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341298 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR926156 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR7070293 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR11465562 | Other | lineage4.1.2.1 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR4817915 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6045503 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR369158 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR8692800 | Sensitive | lineage4 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR926169 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR363479 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR369159 | Other | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR6045795 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR11465563 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1199064 | Sensitive | lineage4.6.1.1 | ug | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR6045706 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None |
|---|
