EBG00000313325 - n.535G>C
Drug resistance types
142 Sensitive
12 RR-TB
41 HR-TB
22 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 76 |
| lineage4 | 106 |
| lineage4.6.2.2 | 3 |
| lineage1.1.2 | 6 |
| lineage2.2.1 | 19 |
| 42 | |
| lineage4.1.2.1 | 9 |
| lineage3.1.3 | 2 |
| lineage4.4.1.2 | 1 |
| lineage3 | 7 |
| lineage4.8 | 4 |
| lineage4.3.2.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.2 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.1 | 2 |
| lineage4.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1.1 | 2 |
| La1 | 1 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 5 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4;lineage3 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 334 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819602 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6045616 | Other | lineage4.4.1.2 | gb | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR5818666 | Other | lineage3 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045010 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045189 | Sensitive | lineage3 | gb | SRR6045158 | Other | lineage4.9 | None | SRR6045289 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046716 | Other | lineage3 | gb | SRR6046739 | Other | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR4831638 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR9613540 | Sensitive | lineage4.6.2.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502943 | HR-TB | None | SRR7131123 | Other | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR10796634 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796597 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3261389 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3261351 | Other | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6197040 | Other | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR6866022 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR751326 | Sensitive | lineage4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9634265 | Sensitive | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9787362 | Sensitive | lineage6 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140942 | Other | None | SRR1106670 | Other | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173777 | Other | lineage4 | None | SRR11972348 | MDR-TB | lineage2.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR1175508 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692854 | Other | lineage4.9 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692898 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692867 | Other | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814362 | Other | lineage4.8 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816177 | Other | lineage4.1.2.1 | None | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | ERR4816755 | Other | lineage4.1.1.3 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR1199064 | Other | lineage4.6.1.1 | ug | ERR4817998 | Other | lineage3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1199057 | Other | lineage4.6.1.1 | ug | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818349 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None |
|---|
