EBG00000313339 - n.2594T>G
Drug resistance types
115 Sensitive
15 RR-TB
57 HR-TB
33 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| 39 | |
| lineage4.9 | 57 |
| lineage4.1.2.1 | 11 |
| lineage2.1 | 3 |
| lineage2.2.1 | 28 |
| La1.3 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 7 |
| lineage2.2.1.1 | 4 |
| lineage4.6 | 1 |
| lineage4.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4 | 58 |
| La1.8.1 | 18 |
| lineage4.7 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.8 | 5 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 6 |
| La1.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 9 |
| lineage4.4.1.1 | 2 |
| lineage2.2 | 2 |
| lineage3.1.1 | 4 |
| lineage1.1.2 | 4 |
| La1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.3 | 2 |
| lineage4.3.4.2 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage6 | 3 |
| lineage6.1.3 | 1 |
| La1.6 | 2 |
| lineage4.1.1 | 3 |
| lineage1.2.2.2 | 1 |
| La1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.5 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage3 | 6 |
| lineage3.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 327 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6511621 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4830705 | Sensitive | lineage4.1.2.1 | dz | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4832031 | HR-TB | lineage2.2.1 | vn | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4872107 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6930920 | Sensitive | lineage4.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR8600071 | Other | La1.8.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323107 | Other | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323041 | HR-TB | None | SRR7851312 | Other | La1.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | DRR184902 | Sensitive | lineage4.8;lineage2.2.1 | vn | ERR1034634 | HR-TB | None | DRR185024 | Other | lineage2.2.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063875 | Sensitive | lineage4.4.1.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797007 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797021 | Other | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187912 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4769421 | Other | La1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358979 | Other | None | ERR6336784 | Sensitive | lineage1.2.1.2 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9119513 | MDR-TB | lineage4.6.2.2 | None | ERR970443 | RR-TB | lineage2.2.1.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787362 | Sensitive | lineage6 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR10993944 | Other | La1.6 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR14802194 | Sensitive | lineage4.3.3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692810 | Other | lineage4.9 | None | SRR8692854 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692868 | Sensitive | lineage4.9 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692778 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692908 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692855 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692890 | Other | lineage4.9 | None | SRR8692907 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692776 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161113 | Other | lineage4.8 | mw | ERR181744 | HR-TB | None | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR181771 | Sensitive | lineage3.1.1 | None | ERR1679639 | Other | lineage4.6.4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750907 | RR-TB | None | ERR1750926 | Other | lineage4.3.2.1 | za | SRR3675246 | Sensitive | lineage4 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1750897 | Sensitive | lineage4.1.1.3 | zw | ERR702405 | Sensitive | lineage2.1 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR176740 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR4815948 | Other | lineage4.8 | None | ERR212015 | Sensitive | lineage4.8 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212084 | Sensitive | lineage1.2.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216949 | Sensitive | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4818110 | Sensitive | lineage4.9 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4819051 | Other | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR2515304 | Pre-XDR-TB | lineage2.2.1 | za | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341222 | Sensitive | lineage3.1 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341319 | Other | lineage3 | None | SRR5341467 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045010 | Other | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6045191 | Sensitive | lineage4.9 | None |
|---|
