EBG00000313339 - n.2594T>G


Drug resistance types
115 Sensitive 15 RR-TB 55 HR-TB 32 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
lineage2.2.1 25
39
lineage3.1.1 4
lineage4.6.4 1
lineage1.2.1.1 1
lineage4 58
lineage4.1.1.2 1
lineage2.1 3
lineage4.4.1 1
lineage4.8 5
lineage4.3.4.2.1 6
lineage1.1.3.2 2
lineage4.9 58
lineage3 6
lineage4.9.1 1
lineage4.1.1.3 1
lineage4.8;lineage2.2.1 1
lineage3.1.3 2
lineage4.1.2.1 12
lineage1.1.2 4
lineage4.5 2
lineage3.1 1
lineage4.9;lineage2.1 1
La1.3 1
lineage4.6.2.2 6
lineage5.2 2
lineage2.2.1.1 4
lineage4.6 1
lineage4.1 1
lineage4.2.1.1 1
lineage4.3.4.1 4
lineage4.1.1.1 1
La1.8.1 18
lineage4.9;La1.8.1 1
lineage4.1.2 2
lineage4.7 1
lineage4.6.1.2 2
lineage4.3.2.1 1
lineage4.3.3 5
lineage4.4.1.2 1
La1.2 2
lineage2.2.2 2
lineage2.2 2
lineage4.4.1.1 2
La1 2
lineage4;lineage3.1 1
lineage3.1.2.1 1
lineage1.2.1.2 1
lineage4.3.4.2 4
lineage1.1.3.1 1
lineage1.2.2.1 1
lineage4;lineage1.2.2.1 1
lineage6.1.3 1
lineage6 3
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.1.1 2
La1.6 2
lineage1.2.2.2 1
La1.4 1
La1.7.1 1
lineage4;lineage2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 322
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4812763 Other lineage2.2.1 None
ERR181744 HR-TB None
ERR181771 Sensitive lineage3.1.1 None
ERR1679639 Other lineage4.6.4 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675246 Sensitive lineage4 None
ERR1750909 RR-TB lineage4.1.1.2 None
ERR702405 Sensitive lineage2.1 None
ERR1750907 RR-TB None
ERR1750938 Other lineage4.4.1 None
ERR4815948 Other lineage4.8 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR176740 HR-TB None
ERR212015 Sensitive lineage4.8 None
ERR221563 Sensitive lineage1.1.3.2 mw
SRR5341384 Sensitive lineage4.9 None
ERR212123 Other None
ERR4816470 Other lineage3 None
ERR216949 Sensitive lineage4 None
SRR5341422 HR-TB lineage2.1 None
ERR212082 Sensitive lineage4.9.1 None
ERR212138 HR-TB lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR216910 Sensitive lineage4.3.4.2.1 None
ERR4818110 Sensitive lineage4.9 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR4816755 Other lineage4.1.1.3 None
DRR184902 Sensitive lineage4.8;lineage2.2.1 vn
ERR2513121 Sensitive lineage3.1.3 None
ERR3275866 Other lineage4.1.2.1 nl
ERR181906 Sensitive lineage3.1.1 mw
ERR245675 Sensitive lineage1.1.2 None
ERR2513259 Other lineage3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4819051 Other lineage4 None
ERR2179695 Sensitive lineage4.5 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR5341373 HR-TB lineage4 None
SRR5341453 Sensitive None
ERR3276155 Other lineage4.1.2.1 nl
ERR3275709 HR-TB lineage3 nl
SRR5341366 Sensitive lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341396 Other lineage4 None
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
SRR5341408 Sensitive lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341455 Sensitive lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341222 Sensitive lineage3.1 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819910 Other lineage4.9 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341313 HR-TB None
SRR5341467 Other lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341319 Other lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2653138 MDR-TB lineage4.1.2.1 None
ERR161113 Other lineage4.8 mw
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693227 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6044780 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR3077969 Other La1.3 None
ERR485006 HR-TB lineage4.9 None
SRR6511621 HR-TB None
ERR4872107 MDR-TB lineage4.6.2.2 None
ERR502478 RR-TB lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4872193 MDR-TB lineage4.6 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6930920 Sensitive lineage4.2.1.1 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR11465715 Sensitive lineage4.1.2.1 None
ERR4816711 Sensitive lineage4.1.1.1 gb
ERR5311076 Other La1.8.1 None
ERR502510 Sensitive lineage4 None
ERR5087707 Other La1.8.1 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
ERR5311088 Other La1.8.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535044 Pre-XDR-TB lineage4.6.1.2 None
SRR8217918 HR-TB None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR8600071 Other La1.8.1 None
ERR323107 Other lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323041 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR7851312 Other La1.2 None
ERR323061 Sensitive lineage4.9 None
ERR323108 HR-TB lineage4 None
DRR185024 Other lineage2.2.2 None
ERR1034634 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR11465579 Sensitive lineage4.3.4.1 None
ERR1063839 HR-TB lineage2.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1035122 Sensitive None
ERR1063875 Sensitive lineage4.4.1.1 None
ERR1063857 HR-TB None
ERR1063890 Sensitive lineage3.1.1 None
ERR1063883 Sensitive lineage4 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR1063896 Sensitive None
ERR1063888 HR-TB lineage1.1.2 None
ERR3283021 HR-TB None
ERR137286 Sensitive lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR126603 Sensitive lineage4.3.3 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283025 HR-TB None
ERR3797015 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3445502 HR-TB lineage4 None
ERR3797007 Other La1.8.1 None
ERR3283030 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3445501 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797021 Other La1.8.1 None
ERR4024991 Other None
ERR3797060 Other La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR4187869 Other La1.8.1 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4187636 Other La1.8.1 None
ERR4187645 Other La1.8.1 None
ERR4187800 Other La1.8.1 None
ERR4187916 Other La1.8.1 None
ERR4187912 Other La1.8.1 None
ERR4187993 Other La1.8.1 None
ERR4596910 Sensitive lineage4 None
ERR4188080 Other La1.8.1 None
ERR4188247 HR-TB None
ERR4769421 Other La1.2 None
ERR4769482 Sensitive La1 None
ERR4769474 HR-TB lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4769521 HR-TB None
ERR4796351 MDR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR6197044 RR-TB lineage4.9 None
ERR4810624 HR-TB lineage2.2 None
ERR6358979 Other None
ERR6336784 Sensitive lineage1.2.1.2 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR6866022 Other None
ERR6359064 Sensitive lineage4.9 None
ERR6866639 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR736818 Sensitive lineage4.3.3 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR773795 Sensitive lineage4.3.4.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR6866807 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR176619 Sensitive lineage4.9 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR212084 Sensitive lineage1.2.2.1 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR9119669 HR-TB None
ERR212112 Sensitive lineage4;lineage1.2.2.1 None
ERR9117826 Other lineage3.1.3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9119513 MDR-TB lineage4.6.2.2 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR970413 MDR-TB lineage2.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786258 Sensitive lineage4.3.4.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787033 Sensitive lineage6 None
ERR9787030 Sensitive lineage6 None
ERR987734 HR-TB lineage4.3.4.2 None
ERR9787362 Sensitive lineage6 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10808805 Sensitive None
SRR1062928 RR-TB lineage4 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1169145 MDR-TB lineage4.1.1 None
SRR10869160 Sensitive lineage2.2.1.1 None
SRR10993951 RR-TB La1.6 None
SRR10809074 Sensitive lineage4 None
SRR10993944 Other La1.6 None
SRR11444077 Sensitive lineage4.6.2.2 None
SRR1158918 Sensitive lineage4 None
SRR1173568 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1180996 HR-TB lineage4 None
SRR1173770 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175052 HR-TB lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR14802194 Sensitive lineage4.3.3 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12882374 Sensitive lineage3.1.1 None
SRR14802191 Sensitive lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR16278273 Other La1.4 None
SRR16156804 RR-TB lineage4.9 None
SRR21713567 Sensitive lineage4.5 None
SRR18002896 Pre-XDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR20632814 Sensitive lineage4 None
SRR8692790 RR-TB lineage4 None
SRR22424905 RR-TB lineage4.9 None
SRR8692810 Other lineage4.9 None
SRR8692812 Other lineage4.9 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR8692807 Other lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692854 Other lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692778 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692898 Other lineage4.9 None
SRR8692908 Other lineage4.9 None
SRR8692771 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692782 Other lineage4.9 None
SRR8692855 Other lineage4.9 None
SRR8692824 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692828 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
SRR8692890 Other lineage4.9 None
SRR8692776 Other lineage4.9 None
SRR8692907 Other lineage4.9 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR8692791 Other lineage4.9 None
SRR8692887 Other None
SRR26159035 Sensitive lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR8692832 Other lineage4.9 None
SRR8692899 Other lineage4.9 None
ERR176780 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161039 Sensitive lineage4.3.4 None