EBG00000313339 - n.2599A>T


Drug resistance types
99 Sensitive 21 RR-TB 72 HR-TB 44 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 106 Other
lineage Counts
lineage Count
La1.8.1 13
lineage4.9 60
La1.7.1 2
lineage4.1.2.1 12
lineage4 73
lineage1.2.1.2 1
lineage2.2.1 38
lineage4.5 1
46
lineage4;lineage2.2 1
lineage4.6.2.2 6
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4 1
lineage1.2.1.1 1
lineage4.1.1.3 6
lineage4.3.2.1 3
lineage2.1 3
lineage4.3.4.2.1 3
lineage1.2.1.2.1 1
lineage1.1.2 6
lineage3 12
lineage4.8 6
lineage4.1.1 3
lineage3.1.3 1
lineage4.3.3 7
lineage3.1 1
lineage4.9;lineage2.1 1
lineage5.2 3
lineage2.2.1.1 5
La1.3 1
lineage4.1 1
lineage5.1.1 2
lineage4.1.2 2
lineage4.7 1
lineage4.4.1.2 2
lineage4.2.1 3
lineage2.2.2 3
lineage4.9.1 1
lineage2.2 2
La1 2
lineage4;lineage3.1 1
lineage4.4.1.1 4
La1.2 1
lineage4.9;La1.3 1
lineage3.1.2.1 1
lineage4.5;lineage2.2.1 1
lineage4.3.2 1
lineage4.6.5 2
lineage1.1.3.1 1
lineage3.1.1 1
lineage4.3.4.2 2
lineage6 4
lineage6.1.3 1
La1.6 1
La2 1
spoligotype Counts
spoligotype Count
None 360
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1791747 Other La1.8.1 None
SRR16156804 RR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR18715102 MDR-TB lineage2.2.1 None
SRR8692810 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR21713567 Sensitive lineage4.5 None
SRR8692790 RR-TB lineage4 None
SRR8692854 Other lineage4.9 None
SRR8692812 Other lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692898 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692778 Other lineage4.9 None
SRR8692908 Other lineage4.9 None
SRR8692771 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692824 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692776 Other lineage4.9 None
SRR8692855 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
SRR8692907 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692828 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692899 Other lineage4.9 None
SRR8692887 Other None
SRR8692832 Other lineage4.9 None
ERR4814312 Other lineage4 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR181744 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4812763 Other lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR1750897 Sensitive lineage4.1.1.3 zw
ERR1750896 Sensitive lineage2.2.1 zw
ERR1750926 Other lineage4.3.2.1 za
ERR702405 Sensitive lineage2.1 None
ERR1750907 RR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4816110 Sensitive lineage4.9 gb
SRR3675246 Sensitive lineage4 None
ERR4817010 HR-TB lineage1.2.1.2.1 None
ERR4817070 Other lineage1.1.2 None
ERR4816231 Other lineage4 None
ERR212123 Other None
ERR3275709 HR-TB lineage3 nl
ERR4816417 Other lineage4.9 None
ERR4816470 Other lineage3 None
ERR212138 HR-TB lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816571 Other lineage1.1.2 None
SRR5341384 Sensitive lineage4.9 None
ERR216965 HR-TB lineage4.9 None
ERR216978 Sensitive lineage4.3.4.2.1 None
ERR4816755 Other lineage4.1.1.3 None
ERR4816711 Sensitive lineage4.1.1 gb
ERR2513405 Other lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR2513259 Other lineage3 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4819051 Other lineage4 None
SRR5341387 Other lineage4 None
ERR4818583 Other lineage4.3.3 None
SRR5341453 Sensitive None
ERR4817584 MDR-TB lineage3 None
SRR5341366 Sensitive lineage4 None
SRR5341373 HR-TB lineage4 None
ERR4817619 Other lineage4.1.2.1 gb
SRR5153091 HR-TB lineage4.3.3 None
SRR5341396 Other lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341408 Sensitive lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514146 Other lineage4.1.2.1 gb
SRR5341400 HR-TB lineage4 None
SRR5341425 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341303 RR-TB lineage4 None
ERR4819840 Sensitive lineage4.8 gb
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819910 Other lineage4.9 None
ERR1023509 Other None
SRR5341308 Sensitive lineage4 None
ERR2517074 Pre-XDR-TB lineage3 gb
SRR5341323 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341313 HR-TB None
SRR5341310 Other lineage1.1.2 None
SRR5341319 Other lineage3 None
SRR5341467 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
ERR4820083 Sensitive lineage3.1 gb
ERR4821045 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821057 HR-TB lineage4 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
SRR6044780 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR2693227 Other lineage4.9 None
ERR2706950 MDR-TB lineage5.2 cd
SRR6046839 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
ERR2851356 Sensitive lineage4.9 None
ERR2815606 Other La1.7.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6511621 HR-TB None
SRR6152838 Other lineage2.2.1.1 ca
ERR3077969 Other La1.3 None
ERR4832031 HR-TB lineage2.2.1 vn
ERR502470 RR-TB lineage4.9 None
ERR4872107 MDR-TB lineage4.6.2.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982141 RR-TB lineage4.3.3 None
SRR7496471 Sensitive None
ERR502517 MDR-TB lineage5.1.1 None
SRR6832644 Other lineage4.3.3 None
SRR6981961 Sensitive lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR5311077 RR-TB La1.8.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR8217918 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR7496523 Other lineage4.7 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR7535082 Sensitive lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR8600276 Other La1.8.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323107 Other lineage4 None
SRR9971122 MDR-TB lineage4.8 None
ERR323066 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
DRR185024 Other lineage2.2.2 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR323085 Sensitive lineage4 None
ERR037504 Other lineage4.9.1 None
ERR067699 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1035122 Sensitive None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR10762297 MDR-TB lineage4.2.1 None
ERR10796632 Other lineage4.3.3 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR1063883 Sensitive lineage4 None
ERR1063888 HR-TB lineage1.1.2 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796597 Other lineage4 None
ERR1213928 MDR-TB lineage4.3.3 pe
ERR3283028 Other None
ERR137286 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR3283025 HR-TB None
ERR133825 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283032 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3283031 HR-TB None
ERR3283041 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283057 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR3468443 Other La1.8.1 None
ERR3468561 HR-TB lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR3468613 RR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3468776 Other La1.8.1 None
ERR3797015 HR-TB None
ERR3797021 Other La1.8.1 None
ERR3797019 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797067 Other La1.8.1 None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797087 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797064 Sensitive None
ERR4024892 Sensitive lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR4024991 Other None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4769442 HR-TB lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR4586795 Other La1.8.1 None
ERR4596910 Sensitive lineage4 None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR4188247 HR-TB None
ERR4769421 Other La1.2 None
ERR4769444 HR-TB lineage4.9 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769474 HR-TB lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796254 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4796351 MDR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4799378 Sensitive lineage4 None
ERR4797474 Other None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4800231 Pre-XDR-TB lineage2.2.1 in
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5864556 Pre-XDR-TB lineage2.2.1 None
ERR4812495 Other lineage4.1.2.1 pe
ERR5979407 Other lineage3 None
ERR6359066 HR-TB lineage4 None
ERR6358979 Other None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358951 HR-TB lineage4 None
ERR6359064 Sensitive lineage4.9 None
ERR6865446 Other lineage4.4.1.1 None
ERR6359074 HR-TB lineage4.9 None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR6865855 Sensitive lineage4.1.2.1 None
ERR6866241 Other lineage4.3.2 None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR6866807 HR-TB lineage4 None
ERR736848 HR-TB None
ERR736837 Other lineage4.9 None
ERR736872 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR751345 Other lineage5.1.1 None
ERR7801176 RR-TB lineage4.6.5 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR751326 Sensitive lineage4 None
ERR7801175 RR-TB lineage4.6.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9119669 HR-TB None
ERR9119513 MDR-TB lineage4.6.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR9786076 Sensitive lineage3 None
ERR9786276 Sensitive lineage4.8 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787033 Sensitive lineage6 None
ERR9787256 Other lineage6.1.3 None
ERR9787336 Other lineage6 None
ERR9787362 Sensitive lineage6 None
ERR983241 MDR-TB lineage2.2.1 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR9786705 Sensitive lineage4.1.2.1 None
ERR9787030 Sensitive lineage6 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10430377 MDR-TB lineage2.2.1 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR10809074 Sensitive lineage4 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR11444077 Sensitive lineage4.6.2.2 None
SRR1158918 Sensitive lineage4 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR1169145 MDR-TB lineage4.1.1 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1172987 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173281 RR-TB lineage3 None
SRR1173568 Other lineage4.9 None
SRR1173740 Other None
SRR1180996 HR-TB lineage4 None
SRR1175052 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR11972367 Sensitive lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14802191 Sensitive lineage2.2.1 None