EBG00000313339 - n.2599A>T


Drug resistance types
63 Sensitive 16 RR-TB 85 HR-TB 38 MDR-TB 15 Pre-XDR-TB 1 XDR-TB 95 Other
lineage Counts
lineage Count
lineage5.2 3
lineage4.6.2.2 3
lineage4.9 129
lineage4.1.2.1 6
La1.6 1
lineage2.2.1.1 4
La2;lineage2.2 1
lineage4 4
La1.7.1 1
lineage4.1.2 1
lineage2.2.1 30
La1.3 1
lineage4.3.3 7
lineage4.3.4.2.1 2
La1.7;lineage4.9;lineage7 3
lineage3 11
lineage6.1.3 2
lineage1.1.2 4
lineage4.3.4.1 3
La3;lineage4.9 9
lineage2.2.1;lineage4.5 1
lineage5.1.1 1
lineage4.1.1.3 5
La1.7;lineage4.9 6
lineage4.2.1 3
lineage4.3.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.3.4.2 2
lineage2;lineage4 1
lineage4.8;lineage4.9 2
lineage4.7 1
La3;lineage4 1
3
La1.2.BCG 2
lineage2.2 1
La1.2 1
lineage4.8 5
lineage2.2.2 3
lineage4.6.5 2
lineage3.1.2.1 1
lineage2.2.1;lineage4.9 1
La1;lineage2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La1.8.1 9
lineage4.9;lineage7 1
lineage2.2;lineage4 1
lineage2.1 1
La1;lineage4.9 2
lineage3.1.1 1
lineage4.9.1 1
lineage4.4.1.2 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage3;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage3.1.3 1
lineage6.1.2 2
La2;lineage4.9 1
lineage4.1.1.1 2
La2 1
La3;lineage4.3.4 1
M.canetti;lineage1 1
lineage4.3.2.1 2
lineage1.2.1.2 1
lineage3;lineage4 1
lineage6 1
lineage4.5 1
lineage4.9;lineage9 1
lineage2.1;lineage4.9 1
lineage1.1.3.1 1
lineage3.1 1
spoligotype Counts
spoligotype Count
None 313
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2706950 MDR-TB lineage5.2 cd
ERR9786597 Other lineage4.6.2.2 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
SRR11444077 Sensitive lineage4.6.2.2 None
SRR10993951 RR-TB La1.6 None
ERR867566 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR3797079 Sensitive lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046839 Other lineage4.9 None
SRR8692790 Other lineage4 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866410 HR-TB lineage4.9 None
ERR8774355 MDR-TB lineage2.2.1 None
SRR1238559 Other lineage4.9 None
ERR3077969 Other La1.3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
ERR2513405 Other lineage2.2.1 None
SRR5341408 Sensitive lineage3 None
ERR9787256 Other lineage6.1.3 None
ERR4769521 RR-TB lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR1063888 HR-TB lineage1.1.2 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR1180996 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4818583 Other lineage4.3.3 None
ERR4796351 Sensitive lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6046376 Other lineage3 None
ERR4769474 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
SRR1173281 Other lineage3 None
ERR926164 Other lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR10796597 Other lineage4.3.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797086 Sensitive lineage4.9 None
SRR26159035 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR3283040 HR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR11972367 Sensitive lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR11465579 Sensitive lineage4.3.4.1 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR10796632 Other lineage4.3.3 None
SAMN02403525 Pre-XDR-TB lineage4.1.1.3 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR8692887 Other None
ERR245675 Sensitive lineage1.1.2 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR4769421 Other La1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4798099 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR16156804 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4812495 Other lineage4.1.2.1 pe
ERR4831617 MDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR10430377 MDR-TB lineage2.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR970443 RR-TB lineage2.2.1.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR8692782 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR5341461 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR4812763 Other lineage2.2.1 None
ERR323062 HR-TB lineage4.9 None
SRR12420628 MDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR10808490 Sensitive lineage2.2.1.1 None
ERR5979407 Other lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4816417 Other lineage4.9 None
ERR6359064 Sensitive lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
ERR4797184 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341396 Other lineage3;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
SRR5341319 Other lineage3 None
SRR8692897 Other lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR161037 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR14802191 Sensitive lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR3797067 Other La1.8.1 None
ERR9786076 Other lineage3 None
SRR1159378 Other lineage4.9 None
ERR4586795 Other La1.8.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR10315466 RR-TB lineage2.2.1 None
SRR7535082 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR3797060 Other La1.8.1 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR9787033 Sensitive lineage6.1.2 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR18715102 MDR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR4132460 MDR-TB lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1172177 HR-TB lineage4.1.1.1 None
ERR2517074 Pre-XDR-TB lineage3 gb
SRR1183965 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR14801749 HR-TB lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR6982141 Other lineage4.3.3 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR8692800 Sensitive lineage4 None
SRR10808805 Other La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR4800231 Pre-XDR-TB lineage2.2.1 in
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR1173740 Other lineage3;lineage4 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR926159 Sensitive lineage4.9 None
ERR1163055 MDR-TB lineage4.8 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR21713567 Other lineage4.5 None
SRR5341455 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR6045191 Sensitive lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR473323 HR-TB lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
ERR4816711 Sensitive lineage4.1.1.1 gb
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28045146 Other lineage4.3.3 None
SRR8692905 Sensitive None
ERR1063896 HR-TB None
SRR28351442 HR-TB lineage3.1 None