EBG00000313325 - n.1005T>C


Drug resistance types
46 Sensitive 13 RR-TB 62 HR-TB 17 MDR-TB 17 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
lineage4 53
lineage4.8 4
lineage3 10
40
lineage4.9 44
lineage1.1.2 2
lineage2.2.1 22
lineage1.1.3.1 1
lineage4.1.2.1 4
lineage4.3.4.2.1 2
lineage4.2.2.2 1
lineage1.1.1.1 2
lineage2.1 4
lineage2.2.1.1 2
lineage4.1.1.3 4
lineage4.2.1.1 1
La2 2
La1.8.1 3
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.3.3 5
lineage4.9;lineage1.1 2
lineage4.9;lineage4.1 1
lineage4.3.4 1
lineage4.3.2 3
lineage4.9;La1.3 2
La1.3 2
La1 1
lineage2.2.1.2 1
lineage3.1.2 1
lineage2.2 2
lineage3.1.3 2
lineage6.1.3 1
lineage4.6.2.2 2
lineage6 2
lineage4.4.1.1 2
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1.1 1
lineage4.4.2 2
lineage4.2.2.1 1
lineage4.2.1 2
La1.7.1 1
lineage4;lineage2.2 1
lineage1.1.1 2
spoligotype Counts
spoligotype Count
None 245
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341432 HR-TB lineage4 None
ERR4820484 Other lineage4.8 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341455 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341313 HR-TB None
SRR5341308 Sensitive lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR5341315 Sensitive None
SRR5341461 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4 None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR2446509 Other lineage3 nl
SRR6045519 HR-TB None
SRR5341470 HR-TB None
ERR4822138 Other lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818464 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6044835 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045233 HR-TB None
SRR6046250 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046492 Other None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046644 HR-TB None
SRR6046612 Other lineage1.1.1.1 None
SRR6511621 HR-TB None
ERR4831618 MDR-TB lineage2.1 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR323037 HR-TB lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6982192 Sensitive lineage4.1.1.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR502510 Sensitive lineage4 None
ERR294266 HR-TB None
ERR502524 HR-TB La2 None
ERR5087623 Other La1.8.1 None
SRR9970980 Other lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR7535082 Sensitive lineage4 None
SRR9971112 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR323053 HR-TB None
ERR323039 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
DRR184982 RR-TB lineage2.2.1 None
DRR185000 Other lineage1.1.1.1 None
ERR1063896 Sensitive None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR4819175 Other lineage4.1.1.3 gb
ERR1023502 MDR-TB lineage2.2.1 None
ERR1035122 Sensitive None
ERR1063855 Other lineage4 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796628 Other lineage4.3.3 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796571 Other lineage4.9 None
ERR137286 Sensitive lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR4820586 Other lineage3 gb
ERR133825 Sensitive lineage4 None
ERR4024991 Other None
ERR3273109 MDR-TB lineage4 None
ERR3439265 Other lineage4.9 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797043 HR-TB None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797073 HR-TB La1.8.1 None
ERR4195871 Sensitive lineage4.3.2 None
ERR4188247 HR-TB None
ERR4769419 Other lineage4.9 None
ERR473332 Other lineage4 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769517 Other La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4798504 Other lineage3 None
ERR4798099 Other None
ERR4797474 Other None
ERR4798262 HR-TB La1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR6866639 Other None
ERR6359074 HR-TB lineage4.9 None
ERR6866022 Other None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736837 Other lineage4.9 None
ERR736872 Sensitive lineage4 None
ERR736865 HR-TB None
ERR9786076 Sensitive lineage3 None
ERR751326 Sensitive lineage4 None
ERR9117826 Other lineage3.1.3 None
ERR9121512 Sensitive lineage4.3.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786276 Sensitive lineage4.8 None
SRR10315567 Other lineage2.2.1 None
ERR9787336 Other lineage6 None
ERR987722 HR-TB None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR9787362 Sensitive lineage6 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR11349143 Sensitive lineage4.1.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1172310 HR-TB None
SRR1172146 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1180172 Other lineage2.2.1 None
SRR1174897 HR-TB None
SRR1180147 Other lineage2.2.1.1 None
SRR1180996 HR-TB lineage4 None
SRR1183144 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR14782405 HR-TB None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR1791747 Other La1.8.1 None
SRR16156775 Other lineage4.9 None
SRR18913750 Other lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR8692816 Other lineage4.9 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR8692790 RR-TB lineage4 None
SRR8692812 Other lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692855 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692825 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692887 Other None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692894 Other lineage4.9 None
SRR8692882 HR-TB lineage4.9 None
SRR8692871 Other lineage4.9 None
SRR8692888 Other lineage4.9 None
SRR3675488 HR-TB None
SRR8692899 Other lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
SRR3675222 Other None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
SRR3675312 HR-TB lineage4 None
SRR3675509 Other lineage4.9 None
SRR3675245 Other lineage4.1.2.1 None
ERR4814976 Other lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR176740 HR-TB None
ERR2027220 Other lineage3.1.3 None
ERR212034 HR-TB None
ERR4816322 Other lineage4.9 None
ERR216965 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR4817069 RR-TB None
ERR4816656 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR3275190 Other lineage3 nl
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816852 Other lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
ERR4818272 Other lineage4.3.2 None
ERR4818110 Sensitive lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341366 Sensitive lineage4 None
ERR4819051 Other lineage4 None
ERR4818929 HR-TB None
SRR5341453 Sensitive None
ERR3275709 HR-TB lineage3 nl
ERR4818952 Other lineage3 None
ERR4818583 Other lineage4.3.3 None
ERR4817554 Other lineage1.1.1 None
SRR5341373 HR-TB lineage4 None
SRR5341387 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341400 HR-TB lineage4 None
SRR5341396 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None