EBG00000313325 - n.1015C>G
Drug resistance types
122 Sensitive
14 RR-TB
88 HR-TB
24 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
100 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.2 | 3 |
| lineage4.3.2.1 | 11 |
| lineage4.1.1 | 7 |
| lineage4.8 | 6 |
| lineage4.3.3 | 6 |
| lineage4.9 | 55 |
| lineage1.1.3.2 | 3 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1 | 28 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4 | 61 |
| 65 | |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage2.1 | 4 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.5 | 2 |
| lineage3 | 7 |
| lineage3.1.3 | 2 |
| lineage4.1 | 3 |
| lineage1.1.2 | 3 |
| lineage4.1.2.1 | 8 |
| lineage1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage2.2 | 7 |
| lineage4.1.1.3 | 4 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.1.2 | 4 |
| lineage4.7 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 2 |
| La2 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.1.4 | 1 |
| La1.8.1 | 6 |
| La1.3 | 2 |
| La1.2 | 4 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage6 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La1.6 | 1 |
| La1.7.1 | 4 |
| La1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 364 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692816 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692868 | Sensitive | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692899 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | SRR8692888 | Other | lineage4.9 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692855 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815471 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176740 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR212034 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816110 | Sensitive | lineage4.9 | gb | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR3675571 | HR-TB | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816656 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4816738 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4818929 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045158 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046299 | HR-TB | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR3148546 | Other | lineage4.3.2 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4832041 | HR-TB | lineage2.2 | vn | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6981912 | Sensitive | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6982070 | RR-TB | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR294266 | HR-TB | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR502524 | HR-TB | La2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR10219878 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3445501 | HR-TB | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3445504 | HR-TB | None | ERR3439441 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4769418 | Other | La1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4798262 | HR-TB | La1 | None | ERR4769452 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769495 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6359069 | Other | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9634265 | Sensitive | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808805 | Sensitive | None | SRR11349143 | Sensitive | lineage4.1.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10993936 | Other | La1.6 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1173587 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR13199734 | Other | La1.2 | None | SRR13888750 | Other | La2 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR16278274 | Other | La1.4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913779 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None |
|---|
