EBG00000313325 - n.1003T>G


Drug resistance types
25 Sensitive 8 RR-TB 50 HR-TB 20 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 75 Other
lineage Counts
lineage Count
lineage4.9;lineage9 2
lineage4.9 80
lineage1;lineage4.9 1
La3;lineage4.9 8
lineage2.2 4
lineage4.4.1.1 2
La1.7.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage4.2.1 1
lineage4 4
La1.7;lineage4.9 5
lineage2.2.1 13
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.1 1
lineage2.2.1.2 3
lineage4.9;lineage7 2
La1.7 1
lineage2.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 3
La3;lineage4 1
lineage4.4.2 3
3
lineage4.8 2
lineage4.1.2.1 3
La1.2 1
lineage4.1.1.3 1
La1.8.1 3
lineage4.9;lineage6.1.3 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage6.3 1
lineage1.2.1.2 1
lineage4.3.2;lineage4.9 1
La1;lineage4.9 2
lineage4.2;lineage4.9 1
lineage4.7 1
lineage4.5 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.2;La1.8.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
M.canetti;lineage4.9 2
lineage4.3.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.2.1.1 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.2 1
lineage4.3.4 1
lineage3 1
lineage4.3.4.2.1 1
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 184
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046593 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR4178161 Other lineage4.4.1.1 None
ERR926159 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4817554 Other lineage1.1.1 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
ERR108125 RR-TB lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
ERR4817069 RR-TB None
SRR28351339 MDR-TB lineage4 None
ERR9786639 Sensitive lineage4.8 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
ERR867566 Other lineage4.9 None
ERR4769427 Other La1.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR926165 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR3797015 HR-TB lineage4.9 None
ERR10762291 MDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR181887 Other lineage4.9 None
SRR7240476 Other La1.8.1 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR176778 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR7496471 Sensitive lineage4 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR323107 HR-TB lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
ERR4769450 Other lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR926155 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR6865446 Other lineage4.4.1.1 None
SRR6045217 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR10796597 Other lineage4.3.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
SRR8692887 Other None
ERR987722 MDR-TB None
ERR245675 Sensitive lineage1.1.2 None
ERR4819051 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797087 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR5341330 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR3797079 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR6045548 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None