EBG00000313325 - n.1003T>G
Drug resistance types
45 Sensitive
5 RR-TB
53 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 83 |
| lineage4.3.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 1 |
| La1.7 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1.2 | 3 |
| La3;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 14 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;lineage4.9 | 8 |
| La1.7;lineage4.9 | 5 |
| La1.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2 | 4 |
| La1;lineage4.9 | 2 |
| lineage4.4.2 | 3 |
| lineage4.9;lineage7 | 2 |
| lineage4.7 | 1 |
| lineage4.8 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4 | 4 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La1.2.BCG | 3 |
| lineage4.2.1.1 | 1 |
| 3 | |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181824 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR5341373 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3283028 | Other | La3;lineage4 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR29231425 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR7496523 | Other | lineage4.7 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR3283042 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR3675389 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1915487 | Other | La1.2.BCG | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | SRR8692894 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR5535933 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR176740 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4817069 | RR-TB | None |
|---|
