EBG00000313325 - n.1003T>G


Drug resistance types
22 Sensitive 8 RR-TB 90 HR-TB 7 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
lineage2.1 1
lineage4 32
63
lineage3 2
lineage4.9 34
lineage4.6.2.2 1
lineage4.1 1
lineage1.1.2 1
lineage1.1.1 2
lineage4.5 2
lineage4.1.1.3 1
lineage4.2.1.1 1
La1.8.1 6
lineage4.7 1
La2 1
lineage2.2.1 13
lineage4.4.2 3
lineage4.3.4 2
lineage4.1.2.1 4
lineage4;lineage3.1 1
lineage4.4.1.1 2
La1.2 2
lineage4.9;La1.3 1
La1.3 1
La1 1
lineage3.1.2 1
lineage2.2.1.2 3
lineage2.2 4
lineage4.8 1
lineage3.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.1.2 2
lineage4.2.1 1
lineage7;lineage2.2.1.2 1
lineage1.2.1.2 1
lineage4;lineage2.2 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 197
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341422 HR-TB lineage2.1 None
SRR3675312 HR-TB lineage4 None
ERR176651 HR-TB None
ERR181887 HR-TB None
ERR4815556 RR-TB lineage3 None
ERR176740 HR-TB None
SRR3675509 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4816702 RR-TB lineage4.6.2.2 None
SRR3675571 HR-TB None
ERR4816656 HR-TB None
ERR212125 HR-TB lineage4 None
ERR4818110 Sensitive lineage4.9 None
ERR2446566 Other lineage4.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR4819051 Other lineage4 None
ERR4817554 Other lineage1.1.1 None
ERR4818929 HR-TB None
ERR4818432 HR-TB lineage4.5 gb
SRR5341400 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341373 HR-TB lineage4 None
SRR5341330 HR-TB None
ERR4819910 Other lineage4.9 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341456 Other None
SRR5341293 HR-TB lineage4 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
SRR6046210 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
SRR5341470 HR-TB None
SRR6045519 HR-TB None
SRR6045233 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6045053 Other None
SRR6045191 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045010 Other lineage4 None
ERR294266 HR-TB None
SRR6046046 Other None
SRR6046644 HR-TB None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6046253 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR4831117 HR-TB None
SRR6785281 Other lineage4.2.1.1 None
ERR323053 HR-TB None
ERR5087623 Other La1.8.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
ERR323045 HR-TB None
ERR502524 HR-TB La2 None
ERR323039 HR-TB None
DRR184982 RR-TB lineage2.2.1 None
ERR323108 HR-TB lineage4 None
ERR323107 Other lineage4 None
DRR188519 Other lineage4.4.2 None
ERR1063859 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1063858 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796597 Other lineage4 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796598 RR-TB lineage4.9 None
ERR133825 Sensitive lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283014 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283028 Other None
ERR3797019 Other La1.8.1 None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283055 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797015 HR-TB None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797064 Sensitive None
ERR3797060 Other La1.8.1 None
ERR3797067 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797068 Other La1.8.1 None
ERR3797079 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178161 Other lineage4.4.1.1 None
ERR4188247 HR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769452 HR-TB None
ERR4769427 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769517 Other La1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4798504 Other lineage3 None
ERR6865446 Other lineage4.4.1.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR4811493 HR-TB None
ERR9786639 Sensitive lineage4.8 None
ERR736856 HR-TB lineage4 None
ERR9117826 Other lineage3.1.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1172146 Sensitive lineage4.9 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR11349143 Sensitive lineage4.1.2 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172310 HR-TB None
SRR1174897 HR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR14782405 HR-TB None
SRR13423546 Other lineage4.4.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR20970016 Other lineage2.2 None
SRR15316595 RR-TB lineage4.4.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969731 Other lineage2.2.1 None
SRR18213909 Other lineage4.1.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR8692812 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR8692879 HR-TB lineage4.9 None
SRR8692816 Other lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692818 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692782 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692825 Other lineage4.9 None
SRR8692855 Other lineage4.9 None
ERR176778 HR-TB None
SRR8692871 Other lineage4.9 None
SRR8692888 Other lineage4.9 None
SRR8692887 Other None
SRR8692899 Other lineage4.9 None
SRR3675222 Other None
SRR3675488 HR-TB None
ERR176779 HR-TB None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675270 HR-TB None
ERR1750908 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR1750944 Other lineage4.1.2 za