ERR867543
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR18003015
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR18003009
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18002941
|
RR-TB
|
lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR4872102
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR9119508
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR1173484
|
Sensitive
|
lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR18002963
|
Other
|
lineage2.2.1
|
None
|
SRR21658550
|
Other
|
lineage1.1.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR3675448
|
Other
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR8692822
|
Other
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5818386
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4972567
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
ERR2027290
|
Other
|
lineage3.1.2.1;lineage4.9
|
None
|
SRR6046484
|
Other
|
lineage1.2.2.2
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR5818448
|
Other
|
lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR13285191
|
Sensitive
|
lineage4.9
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR8692825
|
Other
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR18002964
|
Other
|
lineage2.2.1
|
None
|
SRR18002994
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
SRR5818414
|
Other
|
lineage4.9
|
None
|
SRR18002891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR21727760
|
Other
|
lineage2.2.1
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6046839
|
Other
|
lineage4.9
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR9613550
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR10796589
|
Other
|
lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
ERR5908124
|
Other
|
lineage4.8
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR8692887
|
Other
|
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18003007
|
MDR-TB
|
lineage4.5
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5818464
|
Other
|
lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26159035
|
Sensitive
|
lineage4.9
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR6045158
|
Other
|
lineage4.9
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7240538
|
Other
|
La1.7.1
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR18002875
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR18003032
|
Other
|
lineage2.2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR15315797
|
RR-TB
|
lineage2.2.1
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR867568
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR10219876
|
Other
|
lineage4.3.4.2
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR18003013
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR18002974
|
Other
|
lineage2.2.1
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR4769427
|
Other
|
La1.2
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR9786276
|
Sensitive
|
lineage4.8
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
SRR18002937
|
Other
|
lineage2.2.1
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SRR19304104
|
Other
|
lineage4.8
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4829530
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR867522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR970413
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
ERR867571
|
Other
|
lineage4.9
|
None
|
SRR6046253
|
Sensitive
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR867545
|
Other
|
lineage4.9
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR18002987
|
Other
|
lineage2.2.1
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR8692905
|
Sensitive
|
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR6046087
|
Sensitive
|
lineage4.9
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR2706950
|
MDR-TB
|
lineage5.2
|
cd
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR8692893
|
Other
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1791725
|
Other
|
La1.8.1
|
None
|
SRR18003002
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR18003045
|
Other
|
lineage2.2.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR19303899
|
Other
|
lineage3
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR234659
|
Other
|
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR18002981
|
Other
|
lineage2.2.1
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR8692863
|
Other
|
lineage2.2;lineage4
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR970445
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
SRR18002930
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR28351488
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1173153
|
Other
|
lineage4.9
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR19303907
|
Other
|
lineage4.8
|
None
|
ERR9786639
|
Sensitive
|
lineage4.8
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR13285192
|
Sensitive
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR5818459
|
Other
|
lineage4.9
|
None
|