EBG00000313325 - n.1002G>C


Drug resistance types
34 Sensitive 7 RR-TB 87 HR-TB 24 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 115 Other
lineage Counts
lineage Count
lineage5.2 2
lineage6.1.3 4
lineage4.4.1.2 1
lineage2;lineage4 1
lineage2.2.1 18
La1.7;lineage4.9 6
lineage4.9 118
La1.2.BCG 3
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
3
lineage3 7
lineage4 4
La1;lineage4.9 3
lineage3.1.3 1
lineage4.8;lineage4.9 2
La1.8.1 12
La1.2 2
La1.7.1 5
La3;M.canetti;lineage4.9 1
lineage4.3.4.2.1 2
La1.7;lineage4.9;lineage7 3
La1;lineage2;lineage4.9 1
lineage4.3.2.1 6
lineage4.8 6
lineage4.9;lineage9 2
lineage4.1.2.1 5
lineage2.2.2 1
lineage2.2.1.1 4
La1.3 1
La2;lineage4.9 1
lineage4.2.1 1
lineage4.3.4.2 2
M.canetti;lineage4.9 2
lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2 4
La1.7;lineage4.9;lineage6 1
lineage4.5 2
lineage4.4.1.1.1 1
La1.7.X-unk4;lineage4.9 1
lineage4.1.2 1
lineage4.3.3 2
lineage2.2.1.2 3
lineage3.1.2.1;lineage3.1.2.2 1
La1.2;La1.8.1 1
lineage4.1.1.3 2
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.1.1 1
lineage4.6.2.2 1
lineage1.1.2 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.2.2 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.9;lineage7 2
La2;lineage4.9;lineage9 1
lineage6 1
lineage1.1.3.2 1
lineage4.3.1;lineage4.9;lineage6 1
La1;lineage4.1.2 1
La1.7 1
spoligotype Counts
spoligotype Count
None 275
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR1023236 Other lineage6.1.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4831620 MDR-TB lineage2.2.1 None
DRR188519 Other lineage4.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
SRR28351347 Other lineage3 None
SRR28351339 MDR-TB lineage4 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR7236178 Other La1.8.1 None
ERR4769427 Other La1.2 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR9786076 Other lineage3 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR6981966 Other lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR926156 Other lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180226 HR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR2101628 Other lineage4.3.2.1 None
SRR2101816 Other lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR7240068 Other La1.8.1 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR323062 HR-TB lineage4.9 None
SRR6982139 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6982494 Other lineage2.2.2 None
SRR10808490 Sensitive lineage2.2.1.1 None
ERR4769436 Other La1.3 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR9971112 HR-TB lineage2.2.1 None
SRR18911138 Other lineage3 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR1791909 Other La1.7.1 None
SRR5341293 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR6982419 Other lineage4.8 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR2101643 Other lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR502510 HR-TB lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6982194 Other lineage2.2.1 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4769442 Sensitive lineage4.9 None
SRR7236240 Other La1.8.1 None
ERR987722 MDR-TB None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR6337385 Other La1.2 None
ERR9786639 Sensitive lineage4.8 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR5341330 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Other lineage2.2.1 None
SRR6046492 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR7240070 Other La1.8.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
SRR2101540 Sensitive lineage4.3.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR3806588 Other lineage6.1.3 None
ERR6866410 HR-TB lineage4.9 None
SRR2101685 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR7240476 Other La1.8.1 None
SRR17832802 HR-TB lineage3 None
ERR1063883 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR21728710 Other lineage4.1.1.3 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR7240506 Other La1.8.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR21675949 Other lineage4.3.3 None
SRR6982383 Other lineage4.3.2.1 None
SRR8692825 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1791921 Other La1.8.1 None
ERR6358951 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
DRR185000 Other lineage1.1.1.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675389 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR7240147 Other La1.8.1 None
SRR1915485 Other La1.2.BCG None
ERR4769450 Other lineage4.9 None
SRR18391760 Other La1.7.1 None
SRR7240448 Other La1.8.1 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
SRR7240449 Other La1.8.1 None
SRR13199746 Other La1.7.1 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR8692887 Other None
ERR9786597 Other lineage4.6.2.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR6359074 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR1792247 Other La1.7.1 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR9786276 Sensitive lineage4.8 None
ERR2693252 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
DRR188816 Other lineage4.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR1063855 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6982140 Other lineage2.2.1.1 None
SRR5341308 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341387 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1183111 HR-TB lineage4.9 None
ERR9787362 Sensitive lineage6 None
ERR4817731 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3324375 Other lineage1.1.3.2 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2886463 Sensitive lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR3675222 Other La1.7 None
SRR2101691 Other lineage2.2.1 None
SRR6044835 Other lineage4.9 None