EBG00000313339 - n.2334T>C
Drug resistance types
82 Sensitive
5 RR-TB
45 HR-TB
19 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 119 |
| La1.8.1 | 4 |
| La3;lineage4.9 | 8 |
| lineage2.2.1 | 14 |
| lineage1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7;lineage4.9 | 5 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| La1;lineage4.9 | 2 |
| lineage4.3.3 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| La1.2.BCG | 2 |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage5.2 | 2 |
| lineage2.2 | 1 |
| La3;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.8 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.1.2 | 1 |
| 2 | |
| lineage4.8;lineage4.9 | 2 |
| lineage4.8.1 | 1 |
| lineage2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR8692882 | Sensitive | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR8692822 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR8692825 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR1915487 | Other | La1.2.BCG | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3797067 | Other | La1.8.1 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6045957 | Other | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR867575 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR12420270 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR8692905 | Sensitive | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR6866807 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR8692775 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None |
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