EBG00000313325 - n.1004C>G


Drug resistance types
73 Sensitive 6 RR-TB 95 HR-TB 17 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
70
lineage2.2.1 21
La1.7.1 2
lineage7;lineage2.2.1.2 1
lineage4.2.1 1
lineage4.9 51
La1.8.1 5
lineage4.1.1.3 2
lineage2.2 4
lineage4 69
lineage4;lineage2.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 3
lineage2.1 4
lineage4.1.2.1 4
lineage3.1.3 2
lineage4.4.1.1 2
lineage4.3.2 1
lineage3 6
lineage4.1 2
lineage1.1.2 3
lineage4.1.1.2 1
lineage1.1.3.1 2
lineage4.8 4
lineage1.1.1.1 1
lineage5.2 2
lineage2.2.1.1 2
lineage4.1.2 3
lineage4.3.2.1 1
lineage4.3.3 5
La2 1
lineage4.4.1.2 1
lineage4.4.2 1
lineage4.1.1 1
lineage4.3.4 1
lineage4;lineage3.1 1
La1.2 2
La1.3 1
lineage4.9;La1.3 1
lineage3.1.2 1
La1 1
lineage2.2.1.2 3
lineage4.3.4.2 1
lineage4.5 1
lineage4.6.2.2 1
lineage6.1.3 1
lineage6 2
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 299
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801749 Sensitive None
SRR14782405 HR-TB None
SRR19325518 MDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156775 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18913750 Other lineage2.2.1 None
SRR8692812 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR8692790 RR-TB lineage4 None
SRR8692816 Other lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR8692782 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692855 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692818 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692882 HR-TB lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692899 Other lineage4.9 None
SRR8692888 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
SRR8692871 Other lineage4.9 None
SRR8692887 Other None
ERR1577252 HR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675488 HR-TB None
SRR3675222 Other None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675246 Sensitive lineage4 None
ERR702405 Sensitive lineage2.1 None
SRR3675245 Other lineage4.1.2.1 None
SRR3675270 HR-TB None
SRR5341384 Sensitive lineage4.9 None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
ERR2027220 Other lineage3.1.3 None
ERR212034 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR216965 HR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
ERR4816868 Other lineage4.4.1.1 None
ERR4816656 HR-TB None
ERR4816738 Sensitive lineage4.9 None
ERR4818272 Other lineage4.3.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR3275190 Other lineage3 nl
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR3275709 HR-TB lineage3 nl
ERR4818929 HR-TB None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4819051 Other lineage4 None
ERR4818952 Other lineage3 None
SRR5341387 Other lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341453 Sensitive None
SRR5341396 Other lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341293 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341456 Other None
SRR5341455 Sensitive lineage4 None
SRR5341313 HR-TB None
SRR5341300 Other lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR4819910 Other lineage4.9 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
SRR5341470 HR-TB None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2446509 Other lineage3 nl
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693238 HR-TB lineage4.9 None
SRR5341469 Other lineage4 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045519 HR-TB None
ERR4821616 Other lineage1.1.3.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6046210 Other lineage4 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6046141 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6045158 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045053 Other None
SRR6044835 Sensitive lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046250 Other lineage4.9 None
SRR6046046 Other None
SRR6045233 HR-TB None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046253 HR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046492 Other None
SRR6511621 HR-TB None
SRR6046644 HR-TB None
ERR323037 HR-TB lineage4 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR4831117 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR502510 Sensitive lineage4 None
ERR294266 HR-TB None
ERR323085 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323053 HR-TB None
ERR323108 HR-TB lineage4 None
ERR502524 HR-TB La2 None
SRR7535082 Sensitive lineage4 None
ERR323039 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323107 Other lineage4 None
ERR4819175 Other lineage4.1.1.3 gb
ERR1063855 Other lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR10796563 Other lineage4.3.3 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR10796596 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR3283047 HR-TB None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3283055 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797043 HR-TB None
ERR3797048 HR-TB None
ERR3797046 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3797068 Other La1.8.1 None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR405209 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR4024991 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4769427 Other La1.2 None
ERR473332 Other lineage4 None
ERR4769442 HR-TB lineage4 None
ERR4769436 Other La1.3 None
ERR4769452 HR-TB None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4797474 Other None
ERR4796254 Sensitive lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796929 Sensitive lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798262 HR-TB La1 None
ERR4798099 Other None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4811493 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR6359074 HR-TB lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6358979 Other None
ERR6359066 HR-TB lineage4 None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR736848 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736865 HR-TB None
ERR751326 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9634265 Sensitive None
ERR9786076 Sensitive lineage3 None
ERR752229 Other lineage4.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9786276 Sensitive lineage4.8 None
ERR9786639 Sensitive lineage4.8 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787362 Sensitive lineage6 None
ERR9787336 Other lineage6 None
ERR987722 HR-TB None
SRR10809074 Sensitive lineage4 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315567 Other lineage2.2.1 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR11349143 Sensitive lineage4.1.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1172146 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1172885 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1180996 HR-TB lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1174897 HR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180172 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13199739 Other La1.7.1 None