EBG00000313325 - n.1004C>G


Drug resistance types
37 Sensitive 8 RR-TB 88 HR-TB 26 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 106 Other
lineage Counts
lineage Count
lineage4.1.2.1 6
lineage4.9 130
La3;lineage4.9 8
lineage4 4
lineage3 6
lineage2.2 4
lineage4.8 4
lineage6 1
M.canetti;lineage4.9 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 3
La1;lineage4.1.2 1
lineage4.2;lineage4.9 1
lineage2.2.1 14
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9 7
lineage3;lineage4.9 1
La1.2.BCG 3
lineage1.1.3.1 2
3
lineage4.6.2.2 1
lineage1.1.2 2
La1.7;lineage4.9;lineage6 1
lineage4.5 1
lineage4.3.3 3
La1.2 1
lineage6.1.3 2
La1.7.X-unk4;lineage4.9 1
lineage4.1.2 1
lineage4.2.2.2 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.8.1 5
La1.2;La1.8.1 1
lineage4.1.1.3 3
lineage4.4.1.1 1
lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.1 2
La1.3 1
lineage2.2.2 1
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage4.2.1 1
lineage4.3.4.2 2
La1;lineage4.9 3
lineage4.9;lineage7 2
La1.7 1
lineage5.2 2
lineage4.4.1.2 1
lineage2;lineage4 1
lineage4.8;lineage4.9 2
La3;lineage4 1
lineage4.4.2 1
lineage4.3.4.2.1 3
lineage4.9;lineage9 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
lineage4.3.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage2.1;lineage4.9 1
lineage3.1.3 1
lineage4.4.1.1.1 1
La1.7.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 2
lineage4.9;lineage6.1.3 1
La1.7;lineage3.1;lineage4 1
spoligotype Counts
spoligotype Count
None 274
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR323062 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR3275190 Other lineage3 nl
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR9787362 Sensitive lineage6 None
ERR4817731 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR502510 HR-TB lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR987722 MDR-TB None
ERR9786597 Other lineage4.6.2.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR9786639 Sensitive lineage4.8 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR6046141 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR7240476 Other La1.8.1 None
SRR16156817 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
ERR4769436 Other La1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR4816478 HR-TB lineage4 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
ERR10796632 Other lineage4.3.3 None
ERR3797080 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR8692887 Other None
ERR6359074 HR-TB lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
ERR2693252 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180226 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR2446509 Other lineage3 nl
ERR9787256 Other lineage6.1.3 None
ERR4769439 HR-TB lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR3283030 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR6046250 Other lineage4.9 None
SRR3675245 Other lineage4.1.2.1 None
ERR926158 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR8692825 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR4818272 Other lineage4.3.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6045158 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4769442 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR1063896 HR-TB None
SRR28351347 Other lineage3 None
SRR28351339 MDR-TB lineage4 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4769497 Other La1;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR8692894 Other lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Other lineage2.2.1 None
ERR9786076 Other lineage3 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR124636 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None