Rv0668 - c.1377G>T


Drug resistance types
187 Sensitive 24 RR-TB 85 HR-TB 33 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 107 Other
lineage Counts
lineage Count
lineage4.4.1.1 3
lineage4 122
lineage4.9 110
lineage2.2.1 31
lineage4.1 2
72
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.1.3 1
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage2.1 3
lineage4.3.4.2.1 2
lineage4.1.2.1 12
lineage3 8
lineage5 2
lineage4.1.1 1
lineage4.5 2
lineage4.1.2 3
lineage4.6.1.2 5
lineage4.1;lineage1 1
lineage3.1.3 1
lineage4.8 6
lineage1.1.2 4
lineage1 1
lineage4.1.1.2 1
lineage4.2.1 4
lineage5.1.4 1
lineage4.3.2.1 3
lineage4.6.2.2 4
lineage4.9;lineage2.1 1
lineage4.7 2
lineage5.2 1
lineage2.2.1.1 2
lineage2.2 4
lineage4.2.1.1 1
lineage2.2.2 1
lineage4.8.1 1
lineage4.3.3 2
La1 2
La1.8.1 3
lineage5.1.2 1
La1.3 4
lineage4;lineage3.1 1
lineage4.9;La1.3 1
lineage3.1.2.1 2
lineage2.2.1.2 1
lineage4.5;lineage2.2.1 1
lineage4.3.4 1
lineage1.1.3.1 1
lineage4.3.4.2 1
lineage3.1.1 1
lineage6 1
lineage6.1.3 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 450
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR2101471 RR-TB lineage4.4.1.1 None
SRR20632814 Sensitive lineage4 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR12708416 Sensitive lineage4.1 None
SRR21677886 Sensitive lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR8692790 RR-TB lineage4 None
SRR8692882 HR-TB lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692812 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692898 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692871 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692887 Other None
SRR3675473 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4 None
SRR3675477 Other lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR176778 HR-TB None
ERR176779 HR-TB None
ERR4815471 Other lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675502 Other None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR158583 HR-TB None
SRR3675229 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR3275450 Other lineage4 None
ERR4814734 Other lineage1.2.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR181824 HR-TB lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675247 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675266 Sensitive lineage4.9 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
ERR181887 HR-TB None
ERR176651 HR-TB None
ERR4815572 Other lineage4.1.2.1 None
SRR3675387 Sensitive None
SRR3675318 Other lineage4.9 None
ERR4816964 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR3675514 Sensitive lineage4.9 None
ERR4816967 RR-TB lineage5 None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
ERR212125 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675553 Sensitive lineage4.9 None
SRR3675550 Other None
SRR3675547 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
ERR4817826 RR-TB lineage4.5 None
ERR4816470 Other lineage3 None
ERR4816531 Other lineage4.1.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR3675577 Sensitive lineage4.9 None
ERR212138 HR-TB lineage4 None
ERR3275709 HR-TB lineage3 nl
SRR5341384 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4817976 HR-TB lineage4.1.2.1 None
ERR4817998 Other lineage3 None
ERR4818086 Sensitive lineage4.8 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR1035162 Other None
ERR4818110 Sensitive lineage4.9 None
ERR4818126 RR-TB lineage1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4819051 Other lineage4 None
ERR4818536 Other lineage4.9 None
ERR2513259 Other lineage3 None
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR4818631 RR-TB lineage4 None
SRR5341453 Sensitive None
SRR5341373 HR-TB lineage4 None
SRR5341375 Other lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341387 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341400 HR-TB lineage4 None
SRR5341396 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341418 Other None
ERR4819462 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341293 HR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR1023509 Other None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
ERR2446382 Other lineage4 None
SRR5341313 HR-TB None
SRR5341323 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
ERR4820833 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR4820185 Sensitive lineage4.9 None
SRR5341461 Sensitive lineage4 None
SRR5341366 Sensitive lineage4 None
ERR2517475 Other lineage4 None
SRR5341469 Other lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6046210 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821057 HR-TB lineage4 None
ERR4821288 Other lineage4.7 None
ERR2706950 MDR-TB lineage5.2 cd
ERR4821143 RR-TB lineage4.9 None
SRR6045503 HR-TB None
ERR4821172 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4 None
ERR4821655 Sensitive lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4821550 Other lineage2.2.1 None
SRR6044835 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045892 Sensitive None
SRR6044780 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044952 RR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045957 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045010 Other lineage4 None
SRR6045320 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046482 HR-TB None
ERR2851356 Sensitive lineage4.9 None
ERR4829333 RR-TB lineage4 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046245 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046611 HR-TB lineage4.9 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046824 HR-TB None
SRR6046802 Other lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR6046897 Sensitive lineage4 None
SRR6511621 HR-TB None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR4831739 MDR-TB lineage2.2.1 None
ERR4831724 HR-TB lineage2.2 None
SRR6896383 RR-TB lineage4.4.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832249 Other lineage2.2.1 None
SRR6832787 RR-TB lineage2.2.1 None
SRR6896545 Other lineage4.9 None
ERR502889 Other None
ERR502510 Sensitive lineage4 None
SRR6981961 Sensitive lineage2.2.1 None
SRR7496471 Sensitive None
ERR502943 HR-TB None
SRR7496523 Other lineage4.7 None
SRR9970979 Sensitive lineage4.8 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
DRR185024 Other lineage2.2.2 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323045 HR-TB None
ERR323066 Sensitive lineage4 None
DRR184629 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR323085 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR1023525 HR-TB lineage4 None
ERR067699 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1035122 Sensitive None
ERR1063862 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063858 HR-TB None
ERR1063896 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR1063859 HR-TB None
ERR133825 Sensitive lineage4 None
ERR10796591 MDR-TB lineage4.9 None
ERR323115 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3283028 Other None
ERR3283006 RR-TB lineage4.9 None
ERR3283025 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283014 HR-TB None
ERR3283032 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283047 HR-TB None
ERR3445503 HR-TB None
ERR3439432 Other None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797019 Other La1.8.1 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797074 Sensitive lineage4.9 None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR400326 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR400345 Other lineage4 None
ERR403298 HR-TB lineage4 None
ERR4024991 Other None
ERR4769516 Other La1.3 None
ERR4178226 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769482 Sensitive La1 None
ERR4769474 HR-TB lineage4 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769521 HR-TB None
ERR4797184 Sensitive lineage4 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4797313 HR-TB None
ERR4797474 Other None
ERR4798898 MDR-TB lineage3.1.2.1 None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4798406 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR6358979 Other None
ERR4812155 Sensitive None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866410 Sensitive None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359070 Other lineage4.9 None
ERR6866022 Other None
ERR6866807 HR-TB lineage4 None
ERR6866639 Other None
ERR736834 Sensitive lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736875 HR-TB lineage4 None
ERR736837 Other lineage4.9 None
ERR736872 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119669 HR-TB None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9634265 Sensitive None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9787030 Sensitive lineage6 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR9787256 Other lineage6.1.3 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR11444077 Sensitive lineage4.6.2.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1158918 Sensitive lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173777 Other lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181251 Other lineage2.2.1 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181368 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR13837671 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR13837710 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156832 RR-TB None
SRR15315797 RR-TB lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None