EBG00000313339 - n.895C>T


Drug resistance types
57 Sensitive 27 RR-TB 69 HR-TB 18 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 139 Other
lineage Counts
lineage Count
lineage2.2.1 23
lineage3 24
lineage4.8 34
lineage4.1.2.1 12
La1.6 1
lineage4.4.2 1
lineage4.3.3 1
59
lineage4.3.4.1 3
lineage4.7 1
La1.8.1 4
lineage4.4.1.1 9
lineage4.9.1 2
lineage4.9 48
lineage4 23
lineage4.9;lineage4.3.4 1
lineage4.1.4 1
lineage4.6.2.2 3
La1.3 7
La1.2 3
lineage4.9;La1.3 3
lineage1.1.3.2 1
lineage2.2 3
La1 1
lineage3.1.2.1 1
lineage4.2.1 1
lineage1.1.2 4
lineage4.5 3
lineage6.1.3 1
lineage4.4.1.1.1 1
lineage2.2.1.2 2
lineage4.6.1 1
lineage4.2.2.1 1
lineage1.1.1 4
La1.4 1
lineage7;lineage2.2.1.2 1
lineage4.2.2.2 1
lineage4;lineage2.2 1
lineage4.3.4 1
lineage1.1.3.1 4
lineage4.4.1 1
lineage4.1.1.2 1
lineage2.1 1
lineage4.1.1.3 4
lineage4.3.4.2.1 4
lineage4.1 1
lineage6.3.1 1
lineage4.3.4.2 1
lineage4.6 1
lineage2.2.2 1
lineage4.1.2 2
lineage4.1.1.3.1;lineage3.1.2 1
lineage4.4.1.2 2
lineage5.2 1
lineage1.1.1.1 1
spoligotype Counts
spoligotype Count
None 319
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9971270 RR-TB lineage2.2.1 None
SRR6964650 Sensitive lineage3 None
SRR6855695 Sensitive lineage4.8 None
ERR4815783 Other lineage4.1.2.1 gb
ERR11268038 Other La1.6 None
DRR188519 Other lineage4.4.2 None
SRR7131296 Other lineage4.3.3 None
SRR7496471 Sensitive None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR7496523 Other lineage4.7 None
SRR8600288 Other La1.8.1 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR7517748 HR-TB lineage4.4.1.1 None
ERR017781 Other lineage3 None
ERR11465189 RR-TB lineage4.9.1 None
ERR019855 Other lineage3 None
ERR10796559 Other lineage4.9 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR10796630 HR-TB None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR3283014 HR-TB None
ERR108471 HR-TB lineage4 None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR369151 Sensitive lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3283051 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR3797046 HR-TB None
ERR369157 Sensitive lineage4.9 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797014 Other None
ERR3797017 Other None
ERR369156 Sensitive lineage4.9 None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797080 HR-TB lineage4.9 None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR2514215 Other lineage2.2.1 gb
ERR4769408 Other La1.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769495 Other La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR2514801 Other lineage1.1.3.2 gb
ERR4596910 Sensitive lineage4 None
ERR4769419 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR4769452 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769548 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4798262 HR-TB La1 None
ERR4799025 Pre-XDR-TB None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4800197 HR-TB None
ERR4811493 HR-TB None
ERR5863736 MDR-TB lineage2.2.1 None
ERR5863990 Pre-XDR-TB lineage2.2.1 None
ERR5864927 MDR-TB lineage2.2.1 None
ERR5864324 MDR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR5865953 MDR-TB lineage2.2.1 None
ERR5866478 MDR-TB lineage4.2.1 None
ERR6358991 HR-TB None
SRR21733183 RR-TB lineage1.1.2 None
ERR736835 HR-TB None
ERR736816 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR9787153 Other lineage6.1.3 None
ERR9119669 HR-TB None
ERR9786639 Sensitive lineage4.8 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR023487 RR-TB lineage2.2.1 None
SRR023450 RR-TB lineage2.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10272572 Sensitive lineage4.4.1.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173421 RR-TB lineage4.9 None
SRR1173717 MDR-TB lineage4.6.1 None
SRR1173766 Sensitive lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13180204 Sensitive lineage3 None
SRR14066533 Sensitive lineage1.1.1 None
SRR16156775 Other lineage4.9 None
SRR14782405 HR-TB None
SRR16370646 HR-TB lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969731 Other lineage2.2.1 None
SRR18912069 Other lineage4.1.2.1 None
SRR19303914 Sensitive lineage4.5 None
SRR20970016 Other lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20995191 Sensitive lineage4.4.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR21713567 Sensitive lineage4.5 None
ERR2229577 Sensitive lineage4.8 None
SRR8692790 RR-TB lineage4 None
SRR8692759 Other lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692898 Other lineage4.9 None
ERR4815143 HR-TB lineage4.2.2.2 None
SRR8692818 Other lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692776 Other lineage4.9 None
SRR8692871 Other lineage4.9 None
SRR8692887 Other None
ERR161039 Sensitive lineage4.3.4 None
ERR4815193 MDR-TB lineage4.8 None
ERR2229733 Other lineage4.8 dk
ERR4815171 HR-TB lineage1.1.2 None
ERR4815257 HR-TB lineage4.4.1.1 None
SRR3675234 Other None
ERR2229811 Other lineage4.8 dk
ERR4814617 Other lineage1.1.3.1 None
ERR181744 HR-TB None
ERR4815488 HR-TB lineage4.4.1 None
ERR4816079 Sensitive lineage4.1.2.1 None
ERR2229541 Other lineage4.8 None
ERR1750909 RR-TB lineage4.1.1.2 None
SRR3675270 HR-TB None
ERR4814976 Other lineage4.9 None
ERR176751 HR-TB None
ERR2229810 Other lineage4.8 None
ERR2228965 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR4816192 Sensitive lineage3 None
ERR4817017 Sensitive lineage4.9 None
ERR4816293 Other lineage4.1.2.1 None
ERR212034 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR2229136 RR-TB lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR212123 Other None
ERR2229147 Other lineage4.8 None
ERR2229204 Other lineage4.8 None
ERR212121 HR-TB None
ERR4816470 Other lineage3 None
ERR2229436 Other lineage4.8 None
ERR4817131 Pre-XDR-TB None
ERR2229366 Other lineage4.8 None
ERR4817194 Other lineage4.1.2.1 None
ERR2229804 Other lineage4 None
ERR2229801 Other lineage4 None
ERR4816852 Other lineage4.9 None
ERR2228815 RR-TB lineage4.8 None
ERR4816868 Other lineage4.4.1.1 None
ERR4817234 Other lineage4.1.1.3 None
ERR4817434 Other lineage3 None
ERR4816833 Other lineage4.1.1.3 None
ERR2228810 RR-TB lineage4 None
ERR2228838 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2229505 Other lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR2228900 RR-TB lineage4.8 None
ERR228180 Sensitive lineage3 None
ERR4816907 Other lineage1.1.1 None
ERR2228890 Other lineage4 None
ERR2228910 Other lineage4.8 None
ERR228175 Sensitive lineage3 None
ERR4818110 Sensitive lineage4.9 None
SRR4035600 RR-TB lineage4.3.4.2.1 None
ERR2510820 Other lineage4.8 None
ERR2446566 Other lineage4.1 None
ERR2512423 Other lineage4.1.1.3 None
ERR3275190 Other lineage3 nl
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818261 Other lineage1.1.2 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4817554 Other lineage1.1.1 None
ERR4819051 Other lineage4 None
ERR4818440 Other lineage6.3.1 None
ERR4818536 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4817540 Other lineage4.3.4.2 None
ERR2512849 RR-TB lineage1.1.3.1 None
SRR5007186 Other lineage4.6 None
ERR4819096 Other lineage4.4.1.1 None
ERR4817584 MDR-TB lineage3 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5341373 HR-TB lineage4 None
SAMEA3501067 RR-TB lineage4.8 None
SRR2100532 Sensitive lineage3 None
ERR4820723 RR-TB lineage4.4.1.1 None
SRR2100537 Sensitive lineage3 None
SRR5341408 Sensitive lineage3 None
ERR4820290 Other lineage3 None
ERR4819314 Other lineage1.1.1 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6152899 MDR-TB lineage2.2.2 ca
ERR4819423 Other lineage4.6.2.2 None
ERR4819462 Other lineage4 None
SRR5341432 HR-TB lineage4 None
ERR4819533 Other lineage1.1.2 None
ERR4819602 Sensitive lineage4.9 None
SRR2100877 HR-TB lineage4.1.2 None
SRR5341293 HR-TB lineage4 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR5341456 Other None
SRR5341267 Pre-XDR-TB lineage3 None
ERR1035138 MDR-TB None
ERR4819784 Other lineage4.1.2.1 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR6397579 Other lineage4.4.1.2 ca
SAMEA3501070 RR-TB lineage4.8 None
SRR5341313 HR-TB None
ERR2515022 Sensitive lineage3 None
SRR5341315 Sensitive None
SRR6152980 HR-TB lineage4.8 ca
ERR4820829 Other lineage4.8 None
ERR2706950 MDR-TB lineage5.2 cd
ERR6359082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820130 Other lineage3 None
SRR5341330 HR-TB None
ERR2515230 Sensitive lineage4.8 None
ERR4821799 Other lineage2.2.1 None
SRR5431730 Other La1.8.1 None
ERR2693231 Other None
ERR2446509 Other lineage3 nl
SAMEA3501052 RR-TB lineage4.8 None
ERR4821054 Other lineage3 None
SRR5535933 HR-TB None
ERR2693257 Other None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821119 Other lineage4.4.1.1 None
ERR2693230 Other None
ERR2693254 Other None
ERR4821286 Other lineage4.8 None
ERR270777 HR-TB lineage4.1.2 None
ERR2660539 Other lineage4.9 None
ERR4821409 Other lineage4.8 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821477 Other lineage4.8 None
ERR4821420 Other lineage4.1.2.1 None
ERR4821417 Other lineage1.1.3.1 None
ERR2693227 Other lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6045053 Other None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
SRR6045217 Other lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6046046 Other None
SRR6045264 Sensitive lineage2.2.1 None
SRR6046617 HR-TB lineage2.2.1 None
SRR6046299 HR-TB None
SRR6046397 Other None
SRR6046492 Other None
SRR6046612 Other lineage1.1.1.1 None
SRR6046259 Sensitive lineage4.9 None
ERR4828879 MDR-TB lineage3 None
SRR6046852 MDR-TB lineage3 None
SRR6046644 HR-TB None
SRR6046737 Other lineage4.9 None
SRR6046878 HR-TB lineage4 None
SRR6397733 Other lineage4.4.1.2 None
SRR6397815 Other lineage4.4.1.1 None
ERR11466062 Sensitive lineage4.9.1 None
ERR11466070 Sensitive lineage4.3.4.1 None
ERR4831117 HR-TB None