EBG00000313339 - n.926C>T
Drug resistance types
57 Sensitive
30 RR-TB
16 HR-TB
43 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.2 | 2 |
| lineage2.2.1 | 37 |
| lineage4.3.4.1 | 2 |
| lineage4.9 | 36 |
| La1.8.1 | 13 |
| lineage4.4 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.3 | 13 |
| lineage4.6.2.2 | 5 |
| La1.7.1 | 3 |
| lineage4.1.2.1 | 17 |
| lineage4.8 | 14 |
| lineage4.2.2.2 | 2 |
| lineage2.2 | 3 |
| lineage4 | 4 |
| lineage4.1.1.3 | 13 |
| lineage4.4.1.1 | 5 |
| lineage4.1.1.2 | 2 |
| lineage3 | 9 |
| lineage4.8;lineage4.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| 1 | |
| lineage2.2.2 | 2 |
| lineage4.6.1.2 | 5 |
| lineage1.1.2 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.7 | 4 |
| lineage4.1.1 | 1 |
| lineage6.3.1 | 3 |
| La1.2.BCG | 1 |
| lineage4.2.1 | 8 |
| lineage4.2.1.1 | 2 |
| lineage4.1.4 | 1 |
| lineage1.1.1.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 1 |
| lineage3.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 40 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR15901698 | MDR-TB | lineage2.2.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002977 | Sensitive | lineage2.2.1.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR3275344 | Sensitive | lineage4.8 | nl | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21726726 | Sensitive | lineage4.1.2.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4814595 | Sensitive | lineage4.1.2.1 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4814705 | Sensitive | lineage4 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR171135 | Other | lineage2.2.1 | za | ERR1750874 | Sensitive | lineage4.8 | bw | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR1750898 | Sensitive | lineage4.1.1.3 | zw | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750922 | Sensitive | lineage4.1.1.3 | za | ERR1750916 | Other | lineage2.2.1.1 | None | ERR1750910 | Sensitive | lineage4.1.1.2 | za | ERR1750929 | Sensitive | lineage4.1.1.3 | za | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR2446509 | Other | lineage3 | nl | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4817121 | Sensitive | lineage3 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4817434 | Other | lineage3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SRR4033523 | Other | lineage2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | ERR2513405 | Other | lineage2.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820341 | Sensitive | lineage4.8 | gb | ERR4819910 | Other | lineage4.9 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4821276 | Other | lineage3 | None | ERR2517575 | Sensitive | lineage4.8 | nl | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4829053 | RR-TB | lineage4.6.2.2 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4829917 | HR-TB | lineage4.7 | it | ERR4829240 | HR-TB | lineage4.1.1 | None | ERR2446082 | Sensitive | lineage4.8 | nl | ERR4829231 | Sensitive | lineage6.3.1 | None | ERR4830865 | MDR-TB | lineage4.3.3 | sz | ERR4829548 | Other | La1.2.BCG | it | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4829615 | Sensitive | lineage4.3.3 | None | ERR4829645 | Sensitive | lineage4.1.2.1 | it | ERR4830705 | Sensitive | lineage4.1.2.1 | dz | ERR4829767 | HR-TB | lineage4.8 | None | ERR4829692 | Sensitive | lineage4.1.2.1 | None | ERR4829769 | MDR-TB | lineage4.2.1 | None | ERR4828940 | Sensitive | lineage4.1.2.1 | it | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4830770 | MDR-TB | lineage2.2.1 | ir | ERR4830772 | RR-TB | lineage3 | ir | ERR4828998 | MDR-TB | lineage4.8 | it | ERR4829873 | Sensitive | lineage4.4.1.1 | it | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR3275190 | Other | lineage3 | nl | ERR5087500 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR7131014 | Sensitive | lineage4.1.2.1 | None | SRR7131131 | Sensitive | lineage6.3.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR7131155 | Sensitive | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR4812328 | Other | lineage4.3.3 | pe | ERR4812474 | Sensitive | lineage4.3.3 | pe | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5917683 | Sensitive | lineage4.1.2.1 | by | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR5979407 | Other | lineage3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR11342377 | Sensitive | lineage1.2.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR14801720 | RR-TB | lineage4.8 | None |
|---|
