EBG00000313339 - n.926C>T


Drug resistance types
38 Sensitive 29 RR-TB 14 HR-TB 39 MDR-TB 15 Pre-XDR-TB 1 XDR-TB 75 Other
lineage Counts
lineage Count
lineage4.9 36
lineage4 4
lineage4.8 7
lineage2.2.1 34
lineage3.1.1 2
lineage4.4.2 2
La2 1
lineage4.3.4.1 2
lineage4.4 1
lineage4.6.2.2 4
La1.8.1 13
lineage2.2.1.1 3
La1.7.1 3
lineage4.3.3 10
lineage4.1.2.1 11
lineage2.2 3
lineage4.2.2.2 2
lineage4.4.1.1 3
lineage3 8
lineage4.8;lineage4.1.2 1
lineage4.1.1.3 8
1
lineage1.1.2 1
lineage4.6.1.2 5
lineage2.2.2 2
lineage4.3.4.2.1 3
lineage4.3.2.1 5
lineage4.9;lineage4.2.1 1
lineage4.2.1 8
lineage6.3.1 3
lineage4.1.1 1
lineage1.1.1.1 2
lineage4.2.1.1 2
lineage4.1 1
lineage5.1.1 1
lineage4.7 3
lineage4.1.2 1
lineage4.6 1
lineage4.2.1;lineage2.2.1 1
lineage4.3.4.2 1
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
La1.3 1
lineage4.9.1 1
lineage4.1.1.2 1
lineage4.8;lineage4.3.3 4
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 211
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173185 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1181161 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR14801720 RR-TB lineage4.8 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13423546 Other lineage4.4.2 None
SRR13888750 Other La2 None
SRR15315797 RR-TB lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15901698 MDR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR16157123 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR19303773 Other lineage4.6.2.2 None
SRR1792011 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR18002977 Sensitive lineage2.2.1.1 None
SRR18002991 Pre-XDR-TB lineage2.2.1 None
SRR1792012 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR21469202 Other La1.7.1 None
SRR21469201 Other La1.7.1 None
SRR2100067 Other lineage4.3.3 None
SRR21469200 Other La1.7.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR21726726 Sensitive lineage4.1.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4815143 HR-TB lineage4.2.2.2 None
ERR1750889 Other lineage4.4.1.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815452 Other lineage4.3.3 None
ERR4814705 Sensitive lineage4 None
ERR4817434 Other lineage3 None
ERR1750916 Other lineage2.2.1.1 None
ERR1750941 Sensitive lineage4.8;lineage4.1.2 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816755 Other lineage4.1.1.3 None
ERR171135 Other lineage2.2.1 za
ERR1750921 Sensitive lineage4.1.1.3 None
ERR4817121 Sensitive lineage3 None
ERR4817131 Pre-XDR-TB None
ERR4817204 RR-TB lineage4.9 None
ERR4818261 Other lineage1.1.2 None
ERR4816868 Other lineage4.4.1.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4817915 RR-TB lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR3275190 Other lineage3 nl
ERR4816833 Other lineage4.1.1.3 None
SRR4033523 Other lineage2.2 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR1750899 Sensitive lineage4.1.1.3 zw
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4820130 Other lineage3 None
ERR4819910 Other lineage4.9 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR2446509 Other lineage3 nl
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4821276 Other lineage3 None
ERR4829053 RR-TB lineage4.6.2.2 None
SRR6045002 MDR-TB lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
ERR4829769 MDR-TB lineage4.2.1 None
ERR4829231 Sensitive lineage6.3.1 None
ERR4829615 Sensitive lineage4.3.3 None
ERR4829692 Sensitive lineage4.1.2.1 None
ERR4829240 HR-TB lineage4.1.1 None
ERR4829767 HR-TB lineage4.8 None
SRR6046612 Other lineage1.1.1.1 None
ERR4812328 Other lineage4.3.3 pe
SRR6397640 Other lineage4.2.1.1 None
ERR502472 Other lineage4.6.2.2 None
ERR502482 Sensitive lineage4.9 None
ERR502483 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR6785282 Other lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
ERR5087846 Other La1.8.1 None
ERR502523 Other lineage6.3.1 None
ERR4815783 Other lineage4.1.2.1 gb
SRR6982076 Sensitive lineage4.9 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5087596 Other La1.8.1 None
ERR5087486 Other La1.8.1 None
ERR5087500 Other La1.8.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131014 Sensitive lineage4.1.2.1 None
SRR7131122 Other lineage2.2.1 None
SRR7131071 Sensitive lineage4.1.2.1 None
SRR7131296 Other lineage4.3.3 None
SRR7131155 Sensitive lineage4.7 None
SRR7131185 Other lineage4.1.2.1 None
SRR7131131 Sensitive lineage6.3.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645936 Sensitive lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7585400 MDR-TB lineage3 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971080 RR-TB lineage2.2.1 None
SRR8649119 Other lineage4.6 None
SRR9971114 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755652 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR9971113 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR037235 Sensitive lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
ERR036198 Other lineage4.3.4.2 None
ERR036207 Other lineage4.9 None
ERR038289 Other lineage4.3.3 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR11465562 Other lineage4.1.2.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR3439265 Other lineage4.9 None
ERR3468613 RR-TB La1.8.1 None
ERR3439489 RR-TB La1.8.1 None
ERR3468488 RR-TB La1.8.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4187652 Other lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769553 RR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR4811708 HR-TB lineage4 None
ERR5908229 Sensitive lineage4.3.3 None
ERR5979407 Other lineage3 None
SRR1062865 HR-TB lineage2.2.2 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1049031 HR-TB lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
ERR212114 Other lineage4.3.4.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10315567 Other lineage2.2.1 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1049568 Sensitive lineage4.2.2.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11342377 Sensitive lineage1.2.1.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140927 Sensitive lineage4.3.2.1 None