EBG00000313339 - n.926C>T
Drug resistance types
142 Sensitive
14 RR-TB
11 HR-TB
27 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 182 |
| lineage2.2.1 | 33 |
| lineage4.2.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.3.3 | 6 |
| lineage4.6.1.2 | 4 |
| lineage4.2.1 | 7 |
| lineage4.1.1.3 | 6 |
| La1.8.1 | 11 |
| lineage2.2.2;lineage4 | 2 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.4.2 | 2 |
| lineage4.8 | 5 |
| lineage4.9.1 | 1 |
| La1.7.1 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.4 | 1 |
| lineage4 | 1 |
| lineage4.3.2.1 | 5 |
| lineage3 | 5 |
| lineage4.1.2.1 | 7 |
| La1.3 | 1 |
| lineage4.3.4.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 309 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1208850 | Other | lineage4.9 | None | SRR1208432 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1208447 | Sensitive | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR1209019 | Sensitive | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | SRR1208264 | Sensitive | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR1202538 | Sensitive | lineage4.9 | None | SRR1202405 | Sensitive | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR1202721 | Sensitive | lineage4.9 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1209032 | Sensitive | lineage4.9 | None | SRR1202726 | Sensitive | lineage4.9 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1208659 | Other | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1208897 | Other | lineage4.9 | None | SRR1208675 | Sensitive | lineage4.9 | None | SRR1208684 | Sensitive | lineage4.9 | None | SRR1202735 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR1202555 | Sensitive | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR1202680 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | SRR1208731 | Sensitive | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR1208900 | Other | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR1208750 | Sensitive | lineage4.9 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR1202399 | Sensitive | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR1202583 | Sensitive | lineage4.9 | None | SRR1208452 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1208444 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1208789 | Sensitive | lineage4.9 | None | SRR1202669 | Sensitive | lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1202404 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR14801720 | Other | lineage4.8 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1202503 | Sensitive | lineage4.9 | None | SRR1202508 | Sensitive | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR1208539 | Sensitive | lineage4.9 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1202550 | Sensitive | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | SRR1208524 | Sensitive | lineage4.9 | None | SRR1208805 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1202610 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1208769 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1202536 | Other | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR1208886 | Other | lineage4.9 | None | SRR1208767 | Sensitive | lineage4.9 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | SRR1202523 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208672 | Sensitive | lineage4.9 | None | SRR1208758 | Other | lineage4.9 | None | SRR1208871 | Sensitive | lineage4.9 | None | SRR1208774 | Sensitive | lineage4.9 | None | SRR1208807 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR1208757 | Other | lineage4.9 | None | SRR7645927 | Other | lineage4.8 | None | SRR1208969 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1049030 | Sensitive | lineage4.9 | None | SRR1208917 | Sensitive | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1202702 | Other | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | SRR1208477 | Sensitive | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1202407 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR1208515 | Sensitive | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR1208423 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1208565 | Other | lineage4.9 | None | SRR1202740 | Other | lineage4.9 | None | ERR11465562 | Other | lineage4.1.2.1 | None | SRR1202605 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1208587 | Sensitive | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR1208290 | Sensitive | lineage4.9 | None | SRR1208660 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1202427 | Sensitive | lineage4.9 | None | SRR1202741 | Sensitive | lineage4.9 | None | SRR1208278 | Sensitive | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1208880 | Other | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1208688 | Sensitive | lineage4.9 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR1202425 | Sensitive | lineage4.9 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208958 | Other | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1208556 | Sensitive | lineage4.9 | None | SRR1208653 | Other | lineage4.9 | None | SRR1202548 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR1208647 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR553121 | HR-TB | lineage2.2.1 | None | SRR1208506 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR1202689 | Sensitive | lineage4.9 | None | SRR1209029 | Sensitive | lineage4.9 | None | SRR1208421 | Other | lineage4.9 | None | SRR1208345 | Sensitive | lineage4.9 | None | SRR1202578 | Sensitive | lineage4.9 | None | SRR1208327 | Sensitive | lineage4.9 | None | SRR1208792 | Other | lineage4.9 | None | SRR1208643 | Sensitive | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1209044 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1208915 | Other | lineage4.9 | None | SRR1209014 | Sensitive | lineage4.9 | None | SRR1208398 | Sensitive | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1209046 | Sensitive | lineage4.9 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR1202718 | Sensitive | lineage4.9 | None | ERR3468613 | Other | La1.8.1 | None | SRR1202434 | Sensitive | lineage4.9 | None | SRR1208406 | Sensitive | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208397 | Other | lineage4.9 | None | SRR1208634 | Sensitive | lineage4.9 | None | SRR1202728 | Other | lineage4.9 | None | SRR1208615 | Other | lineage4.9 | None | SRR1208313 | Other | lineage4.9 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR1208730 | Sensitive | lineage4.9 | None | SRR1208338 | Sensitive | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | SRR1208196 | Sensitive | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1208498 | Sensitive | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR2513405 | Other | lineage2.2.1 | None | SRR1208752 | Other | lineage4.9 | None | SRR1208989 | Sensitive | lineage4.9 | None | SRR1208211 | Sensitive | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1202733 | Sensitive | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | SRR1208678 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR1202572 | Sensitive | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1208369 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1208507 | Sensitive | lineage4.9 | None | SRR1208573 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1208567 | Sensitive | lineage4.9 | None | SRR1208545 | Other | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR1208693 | Sensitive | lineage4.9 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR1208875 | Sensitive | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | SRR1208873 | Sensitive | lineage4.9 | None | SRR1208525 | Sensitive | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR1202613 | Other | lineage4.9 | None | SRR1208332 | Other | lineage4.9 | None | SRR1208881 | Sensitive | lineage4.9 | None | SRR1202628 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208874 | Sensitive | lineage4.9 | None | SRR1208455 | Sensitive | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | SRR1208435 | Sensitive | lineage4.9 | None | SRR1208749 | Sensitive | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1208785 | Sensitive | lineage4.9 | None | SRR1208937 | Sensitive | lineage4.9 | None | SRR1209038 | Sensitive | lineage4.9 | None | SRR1208543 | Other | lineage4.9 | None | SRR1208604 | Sensitive | lineage4.9 | None | SRR1208476 | Other | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | SRR1202417 | Other | lineage4.9 | None | SRR1208765 | Sensitive | lineage4.9 | None | SRR1208635 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1208488 | Sensitive | lineage4.9 | None | SRR1208460 | Other | lineage4.9 | None | SRR1792012 | Other | La1.8.1 | None | SRR1208797 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1792011 | Other | La1.8.1 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR1208882 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4819910 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR1202603 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR1208908 | Sensitive | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR1208298 | Sensitive | lineage4.9 | None | SRR1208237 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR1202383 | Sensitive | lineage4.9 | None | SRR1202611 | Sensitive | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1209037 | Sensitive | lineage4.9 | None | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | SRR7585400 | MDR-TB | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1208921 | Other | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR038289 | Other | lineage4.3.3 | None |
|---|
