EBG00000313339 - n.2640C>G
Drug resistance types
107 Sensitive
32 RR-TB
32 HR-TB
36 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
129 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 101 |
| lineage3.1.1 | 3 |
| La1.3 | 10 |
| lineage3 | 22 |
| lineage4.6.2.2 | 3 |
| lineage4 | 24 |
| lineage4.9;La1.3 | 4 |
| lineage2.2.1 | 36 |
| lineage4.4.1.1 | 9 |
| lineage4.4.2 | 5 |
| lineage4.3.3 | 10 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 13 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage4.1.1.3 | 8 |
| lineage4.8 | 18 |
| lineage4.1.1.2 | 2 |
| lineage4.7 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 3 |
| La1.8.1 | 11 |
| lineage2.2 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3.4.1 | 6 |
| La1.7.1 | 4 |
| lineage3.1.3 | 1 |
| lineage4.5 | 1 |
| 5 | |
| lineage3.1.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.3.2 | 3 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 357 |
Geographic prevalence
Country level data for this variant is available for 40 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769406 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769552 | Other | La1.3 | None | ERR4772215 | Other | La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4811101 | Other | lineage4.4.2 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4812474 | Sensitive | lineage4.3.3 | pe | ERR4798823 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR6359070 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR736837 | Other | lineage4.9 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9787336 | Other | lineage6 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9787000 | Sensitive | lineage4.1.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR10993953 | Other | La1.6 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972380 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801942 | Sensitive | lineage4.3.4.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792213 | Other | La1.7.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR20970047 | Sensitive | lineage4.5 | None | SRR2100537 | Sensitive | lineage3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175257 | MDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176771 | Sensitive | None | ERR4815310 | Other | None | ERR161086 | Sensitive | lineage3.1.2 | mw | ERR176827 | Sensitive | lineage1.1.2 | mw | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR4815471 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750879 | Sensitive | lineage4.3.4.2.1 | zw | ERR1750897 | Sensitive | lineage4.1.1.3 | zw | ERR1750880 | MDR-TB | lineage4.4.1.1.1 | zw | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750907 | RR-TB | None | ERR1750928 | Sensitive | lineage4.3.2.1 | za | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR1750916 | Other | lineage2.2.1.1 | None | ERR1750919 | Sensitive | lineage4.4.1.1 | za | ERR1750923 | Sensitive | lineage4.8 | za | ERR4815550 | Other | lineage4 | None | ERR1750934 | Sensitive | lineage2.2.1 | None | ERR1750943 | Sensitive | lineage4 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR4814903 | Sensitive | lineage4.3.2 | gb | ERR4816964 | Other | lineage4.9 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229024 | Sensitive | lineage4 | None | ERR4817480 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817434 | Other | lineage3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817306 | Other | lineage3 | gb | ERR4815815 | Sensitive | lineage4 | None | ERR4818072 | Other | lineage4.1.2.1 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817948 | Other | lineage3 | gb | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR3276144 | Other | lineage3 | nl | ERR4818151 | Other | lineage2.2.1 | gb | ERR2512606 | MDR-TB | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR3276106 | Sensitive | lineage4.4.1.1 | nl | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818484 | Sensitive | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818952 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513682 | Sensitive | lineage3 | None | SRR5153258 | Sensitive | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820290 | Other | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2514446 | Sensitive | lineage4.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819933 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821102 | Sensitive | lineage2.2.1 | gb | ERR4820130 | Other | lineage3 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4821477 | Other | lineage4.8 | None | ERR4822133 | MDR-TB | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046160 | Sensitive | lineage4.8 | gb | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4829233 | Other | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6896301 | Sensitive | lineage4.3.3 | None | SRR6257046 | Pre-XDR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502523 | Other | lineage6.3.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824331 | MDR-TB | lineage4.4.2 | cn | SRR6824678 | RR-TB | lineage4.2.2 | cn | ERR5087486 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR3275190 | Other | lineage3 | nl | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7131258 | Sensitive | lineage4.4.1.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131125 | Other | lineage2.2.1 | None | SRR7131018 | Sensitive | lineage4.3.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7516342 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR025453 | Sensitive | lineage4.3.2 | nl | DRR184982 | RR-TB | lineage2.2.1 | None | ERR025455 | Sensitive | lineage4.3.2 | nl | ERR025449 | Sensitive | lineage4.3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10796558 | Sensitive | lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796635 | Other | lineage4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3439441 | Other | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None |
|---|
