EBG00000313339 - n.2640C>G
Drug resistance types
78 Sensitive
23 RR-TB
33 HR-TB
35 MDR-TB
18 Pre-XDR-TB
1 XDR-TB
121 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 122 |
| lineage2.2.1 | 35 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8 | 15 |
| La1.3 | 6 |
| lineage3 | 9 |
| lineage4.4.2 | 3 |
| lineage6.3.1 | 1 |
| lineage4.3.4.1 | 6 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.1.1.1 | 4 |
| lineage4.7 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1 | 5 |
| lineage4 | 4 |
| lineage4.1.1.3 | 6 |
| lineage4.3.2 | 2 |
| La1.8.1 | 13 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.3.3 | 11 |
| lineage4.2.1.1 | 1 |
| La1.6 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.2 | 2 |
| lineage3.1.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage3.1.1 | 3 |
| lineage2.2.1;lineage4 | 2 |
| lineage2;lineage4.9 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.2.1 | 2 |
| La1.7.1 | 3 |
| lineage1.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 309 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183692 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | SRR1202421 | Other | lineage4.9 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4769408 | Other | La1.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR5163959 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1181392 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR025455 | Sensitive | lineage4.3.2 | nl | SRR1180717 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR025453 | Sensitive | lineage4.3.2 | nl | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR1180138 | Sensitive | lineage4.9 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | ERR161086 | Sensitive | lineage3.1.2 | mw | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | ERR3276144 | Other | lineage3 | nl | SRR7240292 | Other | La1.8.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR9787000 | Sensitive | lineage4.1.2.1 | None | SRR14801942 | Sensitive | lineage4.3.4.1 | None | ERR4769436 | Other | La1.3 | None | SRR1180250 | Other | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR1183452 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR10993953 | Other | La1.6 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR176827 | Sensitive | lineage1.1.2 | mw | ERR4816852 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1183674 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180830 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6045832 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1183097 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6257046 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR1183132 | Other | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | SRR1180061 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769404 | Other | La1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR3276106 | Sensitive | lineage4.4.1.1 | nl | DRR184982 | Other | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180803 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR867519 | Other | lineage4.3.3 | None | ERR4817915 | Other | lineage4.9 | None | SRR1183212 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR5153258 | Sensitive | lineage4.8 | None | SRR1792012 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR867569 | Other | lineage4.9 | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR1208775 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR7617847 | Other | La1.8.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR10680010 | MDR-TB | lineage4.1.2.1 | None | SRR1183282 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR1183061 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1209048 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1202419 | Other | lineage4.9 | None | SRR1183621 | Other | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | SRR1792213 | Other | La1.7.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR1183307 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR1182953 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769506 | Sensitive | lineage4.9 | None | SRR1180666 | Other | lineage4.9 | None | ERR2307789 | MDR-TB | lineage2.2.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR20970047 | Sensitive | lineage4.5 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1183495 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR14801720 | Other | lineage4.8 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR1792011 | Other | La1.8.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None |
|---|
