TB-Profiler result

Run: ERR4769472
Summary

Run ID: ERR4769472

Sample name:

Date: 01-04-2023 06:41:46

Number of reads: 26031

Percentage reads mapped: 0.95

Strain: lineage4.9

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472733 n.888G>A non_coding_transcript_exon_variant 0.94 streptomycin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
rpoB 761972 c.2166C>G synonymous_variant 0.67
rpoB 761998 c.2193_2195delGTC disruptive_inframe_deletion 0.67
rpoB 762005 c.2200_2201insAGC disruptive_inframe_insertion 0.67
rpoB 762009 p.Leu735Met missense_variant 0.67
rpoB 762014 c.2208C>G synonymous_variant 0.67
rpoB 762017 c.2211A>G synonymous_variant 0.67
rpoB 762020 p.Glu738Asp missense_variant 0.67
rpoB 762024 p.Val740Ile missense_variant 0.67
rpoB 762053 c.2247T>C synonymous_variant 0.67
rpoB 762065 c.2259T>G synonymous_variant 0.67
rpoB 762083 c.2277T>C synonymous_variant 0.67
rpoB 762084 p.Ala760Pro missense_variant 0.67
rpoC 762857 c.-513C>G upstream_gene_variant 1.0
rpoB 762858 p.Thr1018Ser missense_variant 1.0
rpoC 762863 c.-507T>G upstream_gene_variant 1.0
rpoB 762881 p.Met1025Ile missense_variant 1.0
rpoC 762905 c.-465C>T upstream_gene_variant 1.0
rpoC 762920 c.-450C>G upstream_gene_variant 1.0
rpoC 762929 c.-441G>C upstream_gene_variant 1.0
rpoC 762932 c.-438G>C upstream_gene_variant 1.0
rpoC 762938 c.-432G>C upstream_gene_variant 1.0
rpoB 762939 p.Met1045Leu missense_variant 1.0
rpoB 762942 p.Ile1046Val missense_variant 1.0
rpoC 762956 c.-414G>T upstream_gene_variant 1.0
rpoC 762965 c.-405T>C upstream_gene_variant 1.0
rpoC 762971 c.-399G>C upstream_gene_variant 1.0
rpoC 762980 c.-390T>C upstream_gene_variant 1.0
rpoC 762989 c.-381G>C upstream_gene_variant 1.0
rpoC 762995 c.-375G>C upstream_gene_variant 1.0
rpoB 763005 p.Cys1067Val missense_variant 1.0
rpoB 763014 p.Met1070Leu missense_variant 1.0
rpoB 763017 p.Gln1071Glu missense_variant 1.0
rpoC 763028 c.-342T>C upstream_gene_variant 1.0
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 764497 c.1128A>G synonymous_variant 1.0
rpoC 764503 c.1134G>C synonymous_variant 1.0
rpoC 764521 c.1152T>C synonymous_variant 1.0
rpoC 764536 c.1167G>T synonymous_variant 1.0
rpoC 764539 c.1170C>G synonymous_variant 1.0
rpoC 764548 c.1179G>A synonymous_variant 1.0
rpoC 764560 c.1191T>C synonymous_variant 1.0
rpoC 764566 c.1197C>G synonymous_variant 1.0
rpoC 764575 c.1206T>G synonymous_variant 1.0
rpoC 764581 c.1212T>C synonymous_variant 1.0
rpoC 764605 c.1236G>T synonymous_variant 1.0
rpoC 764611 c.1242G>C synonymous_variant 1.0
rpoC 764623 c.1254C>G synonymous_variant 0.8
rpoC 764632 c.1263T>A synonymous_variant 1.0
rpoC 764650 c.1281G>T synonymous_variant 1.0
rpoC 764660 p.Val431Ile missense_variant 1.0
rpoC 764695 c.1326T>C synonymous_variant 1.0
rpoC 765902 p.Thr845Ser missense_variant 1.0
rpoC 765923 p.Asn852Ser missense_variant 1.0
rpoC 765927 p.Thr853Ser missense_variant 1.0
rpoC 765930 p.His854Arg missense_variant 1.0
rpoC 765937 c.2568T>C synonymous_variant 1.0
rpoC 765940 c.2571A>G synonymous_variant 1.0
rpoC 765947 c.2578T>C synonymous_variant 1.0
rpoC 765952 c.2583G>C synonymous_variant 1.0
rpoC 765955 c.2586C>T synonymous_variant 1.0
rpoC 765962 c.2593T>C synonymous_variant 1.0
rpoC 765967 c.2598C>G synonymous_variant 1.0
rpoC 765979 c.2610C>G synonymous_variant 1.0
rpoC 765982 c.2613C>T synonymous_variant 1.0
rpoC 765985 c.2616C>T synonymous_variant 1.0
rpoC 765994 c.2625A>C synonymous_variant 1.0
rpoC 766006 c.2637C>T synonymous_variant 1.0
rpoC 766018 p.Asp883Glu missense_variant 1.0
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 1.0
rrs 1471979 n.134T>C non_coding_transcript_exon_variant 1.0
rrs 1472028 n.183A>G non_coding_transcript_exon_variant 1.0
rrs 1472054 n.210_212delCGC non_coding_transcript_exon_variant 1.0
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 1.0
rrs 1472062 n.217G>T non_coding_transcript_exon_variant 1.0
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 1.0
rrs 1472100 n.255T>C non_coding_transcript_exon_variant 0.7
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 1.0
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.86
rrs 1472120 n.275G>T non_coding_transcript_exon_variant 0.8
rrs 1472127 n.282C>T non_coding_transcript_exon_variant 0.93
rrs 1472128 n.283G>C non_coding_transcript_exon_variant 0.93
rrs 1472129 n.284G>A non_coding_transcript_exon_variant 0.88
rrs 1472138 n.293C>A non_coding_transcript_exon_variant 0.83
rrs 1472147 n.302G>T non_coding_transcript_exon_variant 0.81
rrs 1472150 n.305T>G non_coding_transcript_exon_variant 1.0
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.82
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 1.0
rrs 1472214 n.369C>G non_coding_transcript_exon_variant 0.79
rrs 1472215 n.370A>G non_coding_transcript_exon_variant 0.84
rrs 1472234 n.389T>C non_coding_transcript_exon_variant 0.86
rrs 1472235 n.390G>C non_coding_transcript_exon_variant 0.81
rrs 1472240 n.395G>A non_coding_transcript_exon_variant 0.94
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.89
rrs 1472252 n.407G>A non_coding_transcript_exon_variant 0.68
rrs 1472256 n.411T>A non_coding_transcript_exon_variant 0.76
rrs 1472259 n.414C>A non_coding_transcript_exon_variant 0.88
rrs 1472263 n.418C>T non_coding_transcript_exon_variant 0.79
rrs 1472278 n.433C>T non_coding_transcript_exon_variant 0.9
rrs 1472284 n.439C>T non_coding_transcript_exon_variant 0.64
rrs 1472299 n.455_462delCCGGGTTC non_coding_transcript_exon_variant 1.0
rrs 1472309 n.464C>T non_coding_transcript_exon_variant 1.0
rrs 1472311 n.467_470delGGAT non_coding_transcript_exon_variant 1.0
rrs 1472325 n.480G>A non_coding_transcript_exon_variant 1.0
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 1.0
rrs 1472517 n.672T>G non_coding_transcript_exon_variant 0.62
rrs 1472518 n.673G>T non_coding_transcript_exon_variant 0.88
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.97
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.97
rrs 1472544 n.699C>A non_coding_transcript_exon_variant 0.97
rrs 1472545 n.700A>C non_coding_transcript_exon_variant 0.91
rrs 1472557 n.712G>A non_coding_transcript_exon_variant 0.97
rrs 1472571 n.726G>A non_coding_transcript_exon_variant 1.0
rrs 1472573 n.728C>T non_coding_transcript_exon_variant 0.91
rrs 1472574 n.729T>G non_coding_transcript_exon_variant 0.91
rrs 1472579 n.734G>A non_coding_transcript_exon_variant 1.0
rrs 1472581 n.736A>G non_coding_transcript_exon_variant 1.0
rrs 1472582 n.737G>A non_coding_transcript_exon_variant 0.91
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 1.0
rrs 1472616 n.771G>A non_coding_transcript_exon_variant 0.95
rrs 1472655 n.810G>A non_coding_transcript_exon_variant 1.0
rrs 1472659 n.814G>A non_coding_transcript_exon_variant 0.98
rrs 1472672 n.828_838delTTTCCTTCCTT non_coding_transcript_exon_variant 1.0
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.95
rrs 1472708 n.863T>A non_coding_transcript_exon_variant 1.0
rrs 1472715 n.870C>T non_coding_transcript_exon_variant 0.96
rrs 1472719 n.874G>A non_coding_transcript_exon_variant 0.94
rrs 1472734 n.889C>T non_coding_transcript_exon_variant 1.0
rrs 1472742 n.897C>T non_coding_transcript_exon_variant 0.94
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 1.0
rrs 1472781 n.936C>T non_coding_transcript_exon_variant 0.97
rrs 1472786 n.941C>T non_coding_transcript_exon_variant 0.96
rrs 1472793 n.948A>T non_coding_transcript_exon_variant 0.95
rrs 1472803 n.958T>A non_coding_transcript_exon_variant 0.94
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 0.95
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 1.0
rrs 1472861 n.1016G>C non_coding_transcript_exon_variant 1.0
rrs 1472874 n.1029C>T non_coding_transcript_exon_variant 1.0
rrs 1472875 n.1030T>C non_coding_transcript_exon_variant 1.0
rrs 1472878 n.1033G>A non_coding_transcript_exon_variant 1.0
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 1.0
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 1.0
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 1.0
rrs 1472958 n.1113A>T non_coding_transcript_exon_variant 0.67
rrs 1472959 n.1114T>A non_coding_transcript_exon_variant 0.86
rrs 1472967 n.1122G>T non_coding_transcript_exon_variant 0.67
rrs 1472969 n.1125_1126delCG non_coding_transcript_exon_variant 0.67
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.67
rrs 1472975 n.1130T>A non_coding_transcript_exon_variant 0.67
rrs 1472977 n.1132G>T non_coding_transcript_exon_variant 0.67
rrs 1472982 n.1137G>C non_coding_transcript_exon_variant 0.67
rrs 1472987 n.1142G>T non_coding_transcript_exon_variant 0.67
rrs 1472988 n.1143T>A non_coding_transcript_exon_variant 0.67
rrs 1472993 n.1148G>A non_coding_transcript_exon_variant 0.33
rrs 1473004 n.1159T>A non_coding_transcript_exon_variant 0.67
rrs 1473005 n.1160C>T non_coding_transcript_exon_variant 0.67
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 1.0
rrs 1473054 n.1209C>T non_coding_transcript_exon_variant 0.38
rrs 1473062 n.1217T>A non_coding_transcript_exon_variant 0.5
rrs 1473068 n.1223A>G non_coding_transcript_exon_variant 0.5
rrs 1473080 n.1235C>T non_coding_transcript_exon_variant 0.5
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.67
rrs 1473089 n.1244A>T non_coding_transcript_exon_variant 1.0
rrs 1473093 n.1248C>T non_coding_transcript_exon_variant 1.0
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 1.0
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.67
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.67
rrs 1473115 n.1270G>T non_coding_transcript_exon_variant 1.0
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 1.0
rrs 1473123 n.1278A>G non_coding_transcript_exon_variant 0.67
rrs 1473177 n.1332G>A non_coding_transcript_exon_variant 0.5
rrs 1473192 n.1347A>G non_coding_transcript_exon_variant 0.29
rrs 1473194 n.1349A>G non_coding_transcript_exon_variant 0.29
rrs 1473205 n.1360T>C non_coding_transcript_exon_variant 0.33
rrs 1473283 n.1438T>C non_coding_transcript_exon_variant 0.71
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.8
rrs 1473352 n.1507C>T non_coding_transcript_exon_variant 0.5
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 1.0
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 1.0
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 1.0
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.67
rrl 1474178 n.522dupC non_coding_transcript_exon_variant 0.67
rrl 1474197 n.540C>A non_coding_transcript_exon_variant 0.5
rrl 1474201 n.544T>G non_coding_transcript_exon_variant 1.0
rrl 1474202 n.545T>C non_coding_transcript_exon_variant 0.5
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.6
rrl 1474228 n.571T>G non_coding_transcript_exon_variant 0.5
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 1.0
rrl 1474252 n.595T>A non_coding_transcript_exon_variant 0.43
rrl 1474263 n.606G>T non_coding_transcript_exon_variant 0.33
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 1.0
rrl 1474289 n.632C>T non_coding_transcript_exon_variant 1.0
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 1.0
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 1.0
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 1.0
rrl 1474351 n.694G>C non_coding_transcript_exon_variant 1.0
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 1.0
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 1.0
rrl 1474487 n.830G>T non_coding_transcript_exon_variant 1.0
rrl 1474495 n.838G>A non_coding_transcript_exon_variant 1.0
rrl 1474496 n.839C>G non_coding_transcript_exon_variant 1.0
rrl 1474497 n.840G>A non_coding_transcript_exon_variant 1.0
rrl 1474506 n.849C>T non_coding_transcript_exon_variant 1.0
rrl 1474507 n.850G>C non_coding_transcript_exon_variant 1.0
rrl 1474508 n.851C>T non_coding_transcript_exon_variant 1.0
rrl 1474517 n.860C>G non_coding_transcript_exon_variant 1.0
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 1.0
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 1.0
rrl 1474801 n.1144G>A non_coding_transcript_exon_variant 1.0
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 1.0
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 1.0
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 1.0
rrl 1474844 n.1187G>T non_coding_transcript_exon_variant 0.67
rrl 1475816 n.2159C>G non_coding_transcript_exon_variant 0.5
rrl 1475817 n.2160A>G non_coding_transcript_exon_variant 0.5
rrl 1475843 n.2186G>A non_coding_transcript_exon_variant 0.25
rrl 1475858 n.2201T>C non_coding_transcript_exon_variant 0.43
rrl 1475866 n.2209T>A non_coding_transcript_exon_variant 0.33
rrl 1475877 n.2220C>T non_coding_transcript_exon_variant 0.4
rrl 1475880 n.2223C>G non_coding_transcript_exon_variant 0.4
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 1.0
rrl 1475882 n.2225C>G non_coding_transcript_exon_variant 0.4
rrl 1475883 n.2226A>T non_coding_transcript_exon_variant 1.0
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 1.0
rrl 1475895 n.2238C>A non_coding_transcript_exon_variant 0.4
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.6
rrl 1475902 n.2245T>C non_coding_transcript_exon_variant 1.0
rrl 1475906 n.2249C>T non_coding_transcript_exon_variant 0.33
rrl 1475914 n.2257C>T non_coding_transcript_exon_variant 0.33
rrl 1475916 n.2259C>G non_coding_transcript_exon_variant 1.0
rrl 1475920 n.2263G>C non_coding_transcript_exon_variant 0.33
rrl 1475924 n.2267A>G non_coding_transcript_exon_variant 0.33
rrl 1475933 n.2276C>G non_coding_transcript_exon_variant 0.33
rrl 1475939 n.2282G>C non_coding_transcript_exon_variant 0.25
rrl 1475944 n.2287G>A non_coding_transcript_exon_variant 0.29
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.29
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 1.0
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 1.0
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 1.0
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 1.0
rrl 1476035 n.2378G>A non_coding_transcript_exon_variant 1.0
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 1.0
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 1.0
rrl 1476087 n.2430C>T non_coding_transcript_exon_variant 1.0
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 1.0
rrl 1476100 n.2443A>C non_coding_transcript_exon_variant 1.0
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 1.0
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 1.0
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 1.0
rrl 1476113 n.2456T>G non_coding_transcript_exon_variant 1.0
rrl 1476116 n.2459A>G non_coding_transcript_exon_variant 1.0
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 1.0
rrl 1476141 n.2484A>G non_coding_transcript_exon_variant 0.5
rrl 1476153 n.2496T>C non_coding_transcript_exon_variant 0.57
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 1.0
rrl 1476164 n.2507A>G non_coding_transcript_exon_variant 0.29
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.29
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 1.0
rrl 1476196 n.2539C>A non_coding_transcript_exon_variant 0.56
rrl 1476197 n.2540T>C non_coding_transcript_exon_variant 0.56
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 1.0
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.44
rrl 1476204 n.2547C>A non_coding_transcript_exon_variant 0.56
rrl 1476209 n.2552A>G non_coding_transcript_exon_variant 0.5
rrl 1476210 n.2553G>T non_coding_transcript_exon_variant 0.5
rrl 1476212 n.2555T>C non_coding_transcript_exon_variant 0.5
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 1.0
rrl 1476215 n.2558C>A non_coding_transcript_exon_variant 1.0
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.24
rrl 1476225 n.2568T>G non_coding_transcript_exon_variant 0.76
rrl 1476229 n.2572C>A non_coding_transcript_exon_variant 0.76
rrl 1476242 n.2585C>T non_coding_transcript_exon_variant 0.6
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.25
rrl 1476251 n.2594T>A non_coding_transcript_exon_variant 0.71
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.26
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 0.85
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0
rrl 1476265 n.2608G>A non_coding_transcript_exon_variant 0.62
rrl 1476267 n.2610G>T non_coding_transcript_exon_variant 0.36
rrl 1476276 n.2619C>A non_coding_transcript_exon_variant 0.39
rrl 1476280 n.2623A>C non_coding_transcript_exon_variant 0.83
rrl 1476293 n.2636C>T non_coding_transcript_exon_variant 0.54
rrl 1476294 n.2637A>G non_coding_transcript_exon_variant 0.81
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 0.81
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 0.81
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 1.0
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 1.0
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 0.81
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 0.82
rrl 1476313 n.2656G>A non_coding_transcript_exon_variant 0.38
rrl 1476332 n.2675G>C non_coding_transcript_exon_variant 0.9
rrl 1476338 n.2681C>T non_coding_transcript_exon_variant 0.45
rrl 1476353 n.2696G>T non_coding_transcript_exon_variant 0.38
rrl 1476358 n.2701T>C non_coding_transcript_exon_variant 0.95
rrl 1476366 n.2709A>C non_coding_transcript_exon_variant 0.63
rrl 1476372 n.2715T>C non_coding_transcript_exon_variant 0.96
rrl 1476374 n.2717T>G non_coding_transcript_exon_variant 0.65
rrl 1476382 n.2725A>G non_coding_transcript_exon_variant 0.96
rrl 1476383 n.2726T>A non_coding_transcript_exon_variant 0.96
rrl 1476408 n.2751G>A non_coding_transcript_exon_variant 0.27
rrl 1476425 n.2768G>A non_coding_transcript_exon_variant 0.95
rrl 1476427 n.2770G>T non_coding_transcript_exon_variant 0.72
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 1.0
rrl 1476429 n.2772A>C non_coding_transcript_exon_variant 0.72
rrl 1476443 n.2786G>T non_coding_transcript_exon_variant 0.72
rrl 1476455 n.2798C>A non_coding_transcript_exon_variant 0.74
rrl 1476481 n.2824T>C non_coding_transcript_exon_variant 0.98
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.98
rrl 1476512 n.2855C>T non_coding_transcript_exon_variant 0.72
rrl 1476514 n.2857C>T non_coding_transcript_exon_variant 0.98
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.7
rrl 1476519 n.2862C>G non_coding_transcript_exon_variant 0.97
rrl 1476523 n.2866T>C non_coding_transcript_exon_variant 0.23
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 1.0
rrl 1476528 n.2871A>G non_coding_transcript_exon_variant 0.75
rrl 1476530 n.2873C>T non_coding_transcript_exon_variant 0.9
rrl 1476535 n.2878G>A non_coding_transcript_exon_variant 0.75
rrl 1476537 n.2880A>G non_coding_transcript_exon_variant 0.9
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.97
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 1.0
rrl 1476547 n.2890C>T non_coding_transcript_exon_variant 0.9
rrl 1476567 n.2910C>T non_coding_transcript_exon_variant 1.0
rrl 1476572 n.2915G>A non_coding_transcript_exon_variant 0.92
rrl 1476573 n.2916A>G non_coding_transcript_exon_variant 1.0
rrl 1476596 n.2939C>T non_coding_transcript_exon_variant 1.0
rrl 1476601 n.2944G>A non_coding_transcript_exon_variant 1.0
rrl 1476607 n.2950C>T non_coding_transcript_exon_variant 0.85
rrl 1476608 n.2951C>A non_coding_transcript_exon_variant 0.85
rrl 1476614 n.2957A>G non_coding_transcript_exon_variant 1.0
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 1.0
rpsA 1833847 c.306C>G synonymous_variant 0.75
rpsA 1833856 c.315A>G synonymous_variant 0.75
rpsA 1833859 c.318C>T synonymous_variant 0.75
rpsA 1833874 c.333T>C synonymous_variant 0.8
rpsA 1833894 p.Ala118Asp missense_variant 0.8
rpsA 1833914 p.Ala125Pro missense_variant 0.75
rpsA 1833921 p.Lys127Thr missense_variant 0.75
rpsA 1833925 c.384C>T synonymous_variant 0.75
rpsA 1833928 c.387G>C synonymous_variant 0.75
rpsA 1833949 c.408T>C synonymous_variant 0.75
rpsA 1833961 c.420C>G synonymous_variant 0.75
rpsA 1833970 c.429G>C synonymous_variant 0.75
rpsA 1833979 c.438T>C synonymous_variant 1.0
rpsA 1833988 c.447C>G synonymous_variant 1.0
rpsA 1833991 c.450C>G synonymous_variant 1.0
clpC1 4039817 c.888A>C synonymous_variant 1.0
clpC1 4039820 c.885T>C synonymous_variant 1.0
clpC1 4039823 c.882T>C synonymous_variant 1.0
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 1.0
clpC1 4039838 p.Leu289Ile missense_variant 1.0
clpC1 4039850 c.855T>C synonymous_variant 0.67