EBG00000313325 - n.283G>C
Drug resistance types
59 Sensitive
38 RR-TB
21 HR-TB
26 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 73 |
| lineage2.2.1 | 21 |
| lineage3 | 12 |
| lineage4.3.3 | 7 |
| lineage5.1.3 | 1 |
| lineage4.8 | 4 |
| lineage4.2.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage5.1.1 | 1 |
| 9 | |
| lineage2.2.1.1 | 3 |
| lineage4 | 5 |
| lineage4.4.1.1 | 6 |
| lineage4.8.1 | 1 |
| lineage2.2 | 2 |
| lineage4.1.1 | 3 |
| lineage3.1.2.1 | 3 |
| lineage2.2.2 | 4 |
| La1.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage1.1.2 | 5 |
| lineage4.4.1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage1.1.3.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage5.1.2 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 4 |
| lineage3.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.6 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage1.1 | 1 |
| La1.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 203 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473279 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR4797141 | Sensitive | lineage3 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR9117806 | Other | lineage4.8 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | SRR1013599 | HR-TB | None | SRR1013617 | MDR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1048982 | HR-TB | None | SRR1013618 | MDR-TB | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315473 | MDR-TB | lineage4.8.1 | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173377 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173720 | Other | lineage4.9 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR1180972 | MDR-TB | lineage2.2.1 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13199734 | Other | La1.2 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR15368707 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368784 | Sensitive | lineage2.2.1.1 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16156291 | Other | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR6207280 | MDR-TB | lineage4.4.1.1 | None | SRR3105762 | HR-TB | None | ERR176780 | Sensitive | lineage4.9 | None | ERR4815613 | Other | lineage3 | None | SRR3675484 | Sensitive | lineage3.1.1 | gb | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR176811 | Sensitive | lineage4.9.1 | None | ERR176740 | HR-TB | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4812968 | MDR-TB | lineage4.3.3 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR2446544 | Sensitive | lineage3 | nl | ERR4814748 | Other | lineage4.8 | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR4815898 | Other | lineage3 | None | ERR4815985 | Other | lineage5.1.2 | None | ERR4815936 | Other | lineage1.1.2 | None | ERR4816183 | Other | None | SRR6280216 | RR-TB | lineage2.2.2 | cn | SRR6280270 | Sensitive | lineage2.2.1 | cn | ERR212015 | Sensitive | lineage4.8 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR3275548 | Sensitive | lineage3 | nl | ERR216949 | Sensitive | lineage4 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SRR3743190 | Sensitive | lineage4.1.2.1 | None | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | SRR4033377 | HR-TB | lineage2.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4819140 | Other | lineage4.1.2.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR2747678 | Other | La1.8.1 | None | SRR6280273 | RR-TB | lineage2.2.1 | cn | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR6045910 | Other | lineage3.1 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | SRR6045764 | Sensitive | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR4829238 | Sensitive | lineage3 | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046834 | Sensitive | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR8600024 | Other | La1.8.1 | None | ERR5162122 | HR-TB | lineage4.9 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR7755705 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR036231 | Sensitive | lineage4.3.4.2.1 | mw | ERR323061 | Sensitive | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR1023494 | Sensitive | lineage3 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4 | None | ERR10796630 | HR-TB | None | ERR10796590 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3797035 | Other | lineage4.9 | None | ERR3439281 | Sensitive | lineage4.9 | None | ERR3439282 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439280 | Other | La1.8 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR3797084 | Sensitive | lineage4.9 | None |
|---|
