EBG00000313325 - n.863T>A


Drug resistance types
78 Sensitive 7 RR-TB 18 HR-TB 26 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
lineage2.2.1 25
lineage3 3
lineage3.1.1 4
lineage4.8 9
lineage4.9 15
lineage4.2.2.2 3
lineage4.6 2
lineage1.1.3.1 1
lineage4.3.3 12
lineage4.8.1 1
lineage4 5
lineage4.1.1.3 4
lineage4.4.1.1 8
lineage2.2 4
lineage4.1.2.1 9
lineage4.1.1 4
lineage4.3.2.1 4
lineage4.3.4.2 3
9
lineage4;lineage2 1
lineage4.4.1 1
La1.8.1 14
lineage4.2.1.1 1
lineage2.2.1.1 3
lineage4.2.1;lineage2.2.1 1
lineage4.2.1 2
lineage4.1.2 2
lineage4.3.4.2.1 11
lineage4.3.4 1
lineage4.1 1
lineage4;La1 1
La1 1
lineage2.2.1.2 1
lineage2.2.2 9
lineage6.1.3 1
lineage6.1.1 1
La1.6 1
lineage3.1.2.1 3
lineage4.9;lineage1.1 1
lineage1.2.2.2 2
lineage4.3.4.1 1
La1.7.1 1
lineage4.5 2
lineage1.1.3.2 3
lineage4.9.1 2
lineage4;lineage1.2.2.1 1
lineage4.2 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 196
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4828514 HR-TB lineage2.2.1 None
SRR6045992 Other lineage3 None
SRR6045159 Other lineage3.1.1 None
SRR6046447 Sensitive lineage4.8 gb
ERR485006 HR-TB lineage4.9 None
SRR6046752 Sensitive lineage4.2.2.2 None
ERR4872193 MDR-TB lineage4.6 None
SRR6650411 Sensitive lineage1.1.3.1 None
SRR6785282 Other lineage4.3.3 None
SRR6982410 Other lineage4.8.1 None
SRR6982115 Sensitive lineage4 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982168 Sensitive lineage4.4.1.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6982257 RR-TB lineage4.1.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982342 Sensitive lineage4.3.2.1 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6981912 Sensitive None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6981918 Sensitive lineage4.4.1 None
SRR6982508 Sensitive lineage4.9 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6981962 Sensitive None
ERR5162108 Other La1.8.1 None
SRR6982070 RR-TB None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR7645900 Sensitive lineage4.8 None
SRR7645856 Sensitive lineage4.4.1.1 None
SRR9970983 MDR-TB lineage4.3.3 None
SRR7646056 Other lineage4.2.1.1 None
SRR9971076 Sensitive lineage2.2.1.1 None
SRR7755705 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR7755643 Pre-XDR-TB lineage4.2.1 None
ERR126603 Sensitive lineage4.3.3 None
ERR323041 HR-TB None
SRR9971195 MDR-TB lineage4.3.3 None
ERR323061 Sensitive lineage4.9 None
ERR036200 Sensitive lineage4.1.2 None
ERR036247 Sensitive lineage4.3.4.2.1 mw
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR10796559 Other lineage4.9 None
ERR10796631 Other lineage4.3.4 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR10796623 Other lineage4.1.1 None
ERR10796627 Other lineage4 None
ERR137226 MDR-TB lineage2.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR144557 Sensitive lineage4.8 None
ERR3324345 RR-TB lineage4.1 None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR144568 Pre-XDR-TB None
ERR4187604 RR-TB La1.8.1 None
ERR4187666 Other La1.8.1 None
ERR4187641 Other lineage4;La1 None
ERR4187995 Other La1.8.1 None
ERR4187720 Other La1.8.1 None
ERR4187921 Other None
ERR4188396 Sensitive La1 None
ERR4188035 Other La1.8.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR4188369 Other La1.8.1 None
ERR4188352 Other La1.8.1 None
ERR4188372 RR-TB La1.8.1 None
ERR4188375 Sensitive lineage4.9 None
ERR4769512 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
ERR4769472 Other lineage4.9 None
ERR4796348 Pre-XDR-TB lineage2.2.1.2 None
ERR4808980 Pre-XDR-TB lineage2.2.2 None
ERR6197022 Other lineage4.9 None
ERR4809194 RR-TB lineage2.2.1 None
ERR5865993 MDR-TB lineage2.2.1 None
ERR6359064 Sensitive lineage4.9 None
ERR6362500 Pre-XDR-TB lineage2.2.1 None
ERR736808 Sensitive lineage2.2.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR736818 Sensitive lineage4.3.3 None
ERR736867 HR-TB None
ERR7821140 Sensitive lineage2.2.1.1 None
ERR751317 Sensitive lineage4.9 None
ERR773795 Sensitive lineage4.3.4.2 None
ERR8773690 HR-TB lineage4.2.1 None
ERR8665802 MDR-TB lineage2.2.1 None
ERR9117681 Other lineage4.3.3 None
ERR8774091 Sensitive lineage4.1.1.3 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR9119591 MDR-TB lineage4.6 None
ERR9992612 Pre-XDR-TB lineage4.3.3 None
ERR9787079 Other lineage6.1.3 None
ERR9787164 Sensitive lineage6.1.1 None
ERR987766 HR-TB lineage4.3.3 None
ERR987734 HR-TB lineage4.3.4.2 None
ERR9992725 Pre-XDR-TB lineage2.2.2 None
ERR9992658 HR-TB lineage2.2.1 None
ERR9993035 MDR-TB lineage4.4.1.1 None
ERR9992810 Pre-XDR-TB lineage2.2.2 None
ERR9993024 Pre-XDR-TB lineage2.2.2 None
ERR9993034 MDR-TB lineage4.1.2.1 None
ERR9992790 Pre-XDR-TB lineage2.2.2 None
ERR9993029 MDR-TB lineage4.3.3 None
ERR9993028 Pre-XDR-TB lineage2.2.2 None
ERR9993216 MDR-TB lineage4.1.1.3 None
ERR9993145 Pre-XDR-TB lineage2.2.2 None
SRR10993953 Other La1.6 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR1162841 MDR-TB lineage4.3.3 None
SRR1167264 Pre-XDR-TB lineage2.2 None
SRR1165236 Pre-XDR-TB lineage2.2 None
SRR1169145 MDR-TB lineage4.1.1 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR1173174 Pre-XDR-TB lineage2.2.2 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR1181319 Other lineage2.2.1 None
SRR1181136 Sensitive lineage2.2 None
SRR11972350 MDR-TB lineage2.2.1 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR11972387 MDR-TB lineage2.2.1 None
SRR12199465 Sensitive lineage2.2.1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12882669 RR-TB lineage3.1.1 None
SRR14782760 Sensitive lineage4.3.4.1 None
SRR14782555 Pre-XDR-TB lineage2.2.1 None
SRR1792265 Other La1.8.1 None
SRR1792378 Other La1.8.1 None
SRR18391760 Other La1.7.1 None
ERR1465744 Sensitive lineage4.1.2.1 None
SRR2101532 Sensitive lineage4.4.1.1 None
SRR2101529 Sensitive lineage4.3.2.1 None
ERR2179785 Sensitive lineage4.5 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR176780 Sensitive lineage4.9 None
ERR161113 Other lineage4.8 mw
ERR176781 Sensitive lineage1.1.3.2 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR176811 Sensitive lineage4.9.1 None
ERR176814 Sensitive lineage4.3.4.2.1 mw
ERR181771 Sensitive lineage3.1.1 None
ERR176565 Sensitive lineage4.3.4.2.1 None
ERR176517 Sensitive lineage1.1.3.2 None
ERR176619 Sensitive lineage4.9 None
ERR2446456 HR-TB lineage4.4.1.1 None
ERR4814901 Other lineage2.2.1 gb
ERR176740 HR-TB None
ERR212015 Sensitive lineage4.8 None
SRR3742667 Sensitive lineage4.9 None
ERR4817102 Sensitive None
ERR216901 Other lineage3.1.1 None
ERR4816232 Other lineage4 None
ERR212112 Sensitive lineage4;lineage1.2.2.1 None
SAMN02599156 HR-TB lineage3.1.2.1 None
ERR216910 Sensitive lineage4.3.4.2.1 None
ERR216928 Other lineage4.9.1 None
ERR216949 Sensitive lineage4 None
ERR216953 Sensitive lineage4.3.4.2.1 None
ERR221563 Sensitive lineage1.1.3.2 mw
SAMN02403473 Pre-XDR-TB lineage2.2.2 None
ERR4816800 Other lineage4.8 gb
SRR4033342 Sensitive lineage2.2.1 za
SRR4033383 Sensitive lineage2.2.1 za
ERR4818023 Other lineage4.1.2 gb
ERR2179737 HR-TB lineage4.2 None
ERR4818188 Other lineage4.1.2.1 None
ERR2512443 Other lineage4.8 gb
ERR4818176 Other lineage4.1.2.1 None
ERR2179695 Sensitive lineage4.5 None
SRR4037619 Sensitive lineage4.3.2.1 None
SRR4037868 Sensitive lineage4.3.2.1 None
ERR4818869 Other lineage4.2.2.2 None
ERR245848 Sensitive lineage4.3.4.2.1 mw
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5152904 Other lineage2.2.1 None
ERR2660495 Sensitive lineage1.2.2.2 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR4820076 Other lineage1.1.1 gb
ERR4820968 Other lineage4.1.2.1 gb
ERR4820270 MDR-TB lineage4.8 gb
ERR4820777 Other lineage4.1.2.1 None
SRR5341317 Pre-XDR-TB lineage3 None
ERR4821101 Sensitive lineage4.2.2.2 gb
ERR2660536 Sensitive lineage2.2.1 None
ERR2747678 Other La1.8.1 None
ERR4822150 Other lineage4.8 gb
ERR4821516 Other lineage3 None