EBG00000313325 - n.863T>A
Drug resistance types
78 Sensitive
7 RR-TB
18 HR-TB
26 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 25 |
| lineage3 | 3 |
| lineage3.1.1 | 4 |
| lineage4.8 | 9 |
| lineage4.9 | 15 |
| lineage4.2.2.2 | 3 |
| lineage4.6 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 12 |
| lineage4.8.1 | 1 |
| lineage4 | 5 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 8 |
| lineage2.2 | 4 |
| lineage4.1.2.1 | 9 |
| lineage4.1.1 | 4 |
| lineage4.3.2.1 | 4 |
| lineage4.3.4.2 | 3 |
| 9 | |
| lineage4;lineage2 | 1 |
| lineage4.4.1 | 1 |
| La1.8.1 | 14 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 11 |
| lineage4.3.4 | 1 |
| lineage4.1 | 1 |
| lineage4;La1 | 1 |
| La1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.2 | 9 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 1 |
| La1.6 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| lineage4.5 | 2 |
| lineage1.1.3.2 | 3 |
| lineage4.9.1 | 2 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828514 | HR-TB | lineage2.2.1 | None | SRR6045992 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046447 | Sensitive | lineage4.8 | gb | ERR485006 | HR-TB | lineage4.9 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | None | ERR5162108 | Other | La1.8.1 | None | SRR6982070 | RR-TB | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR7755705 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR323041 | HR-TB | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR144557 | Sensitive | lineage4.8 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR144568 | Pre-XDR-TB | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187666 | Other | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4187720 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4188396 | Sensitive | La1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188369 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197022 | Other | lineage4.9 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR736867 | HR-TB | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR8774091 | Sensitive | lineage4.1.1.3 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR9119591 | MDR-TB | lineage4.6 | None | ERR9992612 | Pre-XDR-TB | lineage4.3.3 | None | ERR9787079 | Other | lineage6.1.3 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR9992810 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993024 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9992790 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9993028 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | SRR10993953 | Other | La1.6 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR18391760 | Other | La1.7.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161113 | Other | lineage4.8 | mw | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR176811 | Sensitive | lineage4.9.1 | None | ERR176814 | Sensitive | lineage4.3.4.2.1 | mw | ERR181771 | Sensitive | lineage3.1.1 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR176740 | HR-TB | None | ERR212015 | Sensitive | lineage4.8 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4817102 | Sensitive | None | ERR216901 | Other | lineage3.1.1 | None | ERR4816232 | Other | lineage4 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816800 | Other | lineage4.8 | gb | SRR4033342 | Sensitive | lineage2.2.1 | za | SRR4033383 | Sensitive | lineage2.2.1 | za | ERR4818023 | Other | lineage4.1.2 | gb | ERR2179737 | HR-TB | lineage4.2 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818176 | Other | lineage4.1.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR4037868 | Sensitive | lineage4.3.2.1 | None | ERR4818869 | Other | lineage4.2.2.2 | None | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4820076 | Other | lineage1.1.1 | gb | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4820777 | Other | lineage4.1.2.1 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR4821101 | Sensitive | lineage4.2.2.2 | gb | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2747678 | Other | La1.8.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821516 | Other | lineage3 | None |
|---|
