EBG00000313325 - n.863T>A
Drug resistance types
146 Sensitive
2 RR-TB
7 HR-TB
13 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 3 |
| lineage4.8 | 4 |
| lineage4.9 | 121 |
| lineage3.1.1 | 3 |
| lineage4.3.3 | 8 |
| lineage2.2.1 | 19 |
| La1.8.1 | 8 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.2 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.2.1 | 6 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 11 |
| lineage4.2.1.1 | 1 |
| La1.8.1;lineage4.9 | 4 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 2 |
| 1 | |
| lineage3.1.2.1 | 3 |
| lineage6.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.2.1;lineage4 | 1 |
| La1.7.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.6 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.3 | 2 |
| lineage3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 236 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | SRR1208467 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1180692 | Sensitive | lineage4.9 | None | SRR1183682 | Other | lineage4.9 | None | SRR1181581 | Sensitive | lineage4.9 | None | ERR181771 | Sensitive | lineage3.1.1 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1202556 | Other | lineage4.9 | None | SRR1208261 | Sensitive | lineage4.9 | None | SRR1181245 | Other | lineage4.9 | None | SRR1181496 | Other | lineage4.9 | None | SRR11972175 | Sensitive | lineage2.2.1 | None | ERR161113 | Other | lineage4.8 | mw | SRR1180486 | Other | lineage4.9 | None | ERR4188035 | Other | La1.8.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR1183187 | Sensitive | lineage4.9 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | SRR1183476 | Sensitive | lineage4.9 | None | SRR1181593 | Other | lineage4.9 | None | ERR4818023 | Other | lineage4.1.2 | gb | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR1183016 | Sensitive | lineage4.9 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1167264 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180131 | Sensitive | lineage4.9 | None | ERR144557 | Sensitive | lineage4.8 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR1208913 | Sensitive | lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR1183309 | Other | lineage4.9 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR1180118 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR1208338 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR1208612 | Other | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR1183102 | Sensitive | lineage4.9 | None | ERR3324345 | RR-TB | lineage4.1 | None | SRR1183664 | Other | lineage4.9 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR176619 | Sensitive | lineage4.9 | None | SRR7236233 | Other | La1.8.1 | None | SRR1182874 | Sensitive | lineage4.9 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR1209021 | Sensitive | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR126603 | Sensitive | lineage4.3.3 | None | SRR1183451 | Sensitive | lineage4.9 | None | ERR216928 | Other | lineage4.9.1 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR1208801 | Sensitive | lineage4.9 | None | SRR1183504 | Sensitive | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR1181195 | Sensitive | lineage4.9 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SRR1208236 | Other | lineage4.9 | None | SRR1183356 | Sensitive | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR176814 | Sensitive | lineage4.3.4.2.1 | mw | ERR4188213 | Other | La1.8.1 | None | SRR1183223 | Sensitive | lineage4.9 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR4769472 | Other | lineage4.9 | None | SRR1208260 | Sensitive | lineage4.9 | None | SRR1181143 | Other | lineage4.9 | None | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | SRR4037868 | Sensitive | lineage4.3.2.1 | None | SRR7240350 | Other | La1.8.1 | None | SRR1208378 | Other | lineage4.9 | None | SRR1183679 | Other | lineage4.9 | None | SRR1183709 | Other | lineage4.9 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1183179 | Other | lineage4.9 | None | SRR1180594 | Sensitive | lineage4.9 | None | SRR1181572 | Sensitive | lineage4.9 | None | SRR12199400 | Sensitive | lineage4.9 | None | ERR736818 | Sensitive | lineage4.3.3 | None | SRR1208456 | Sensitive | lineage4.9 | None | SRR1183604 | Sensitive | lineage4.9 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR1792265 | Other | La1.8.1 | None | SRR1183485 | Other | lineage4.9 | None | SRR1181228 | Sensitive | lineage4.9 | None | SRR1208804 | Sensitive | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR1208470 | Sensitive | lineage4.9 | None | SRR1181189 | Other | lineage4.9 | None | ERR144568 | Sensitive | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR1202610 | Sensitive | lineage4.9 | None | SRR1208978 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | SRR1183276 | Other | lineage4.9 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR1202598 | Sensitive | lineage4.9 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR1209046 | Sensitive | lineage4.9 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR1208669 | Sensitive | lineage4.9 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR1183499 | Other | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | SRR1183231 | Other | lineage4.9 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR1182896 | Other | lineage4.9 | None | SRR1181594 | Sensitive | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR1183316 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR4188375 | Sensitive | lineage4.9 | None | SRR1181579 | Sensitive | lineage4.9 | None | SRR1208989 | Sensitive | lineage4.9 | None | SRR1202725 | Sensitive | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR1180091 | Other | lineage4.9 | None | ERR216901 | Other | lineage3.1.1 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR1202380 | Sensitive | lineage4.9 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1182919 | Sensitive | lineage4.9 | None | SRR1208555 | Sensitive | lineage4.9 | None | SRR1183442 | Other | lineage4.9 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR1183708 | Other | lineage4.9 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR1202396 | Other | lineage4.9 | None | SRR1180745 | Other | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR1180587 | Sensitive | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR1181587 | Other | lineage4.9 | None | SRR1182916 | Sensitive | lineage4.9 | None | SRR1180520 | Other | lineage4.9 | None | ERR212112 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR1208645 | Sensitive | lineage4.9 | None | SRR1180153 | Other | lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR1183024 | Sensitive | lineage4.9 | None | SRR4033383 | Sensitive | lineage2.2.1 | za | SRR1180095 | Other | lineage4.9 | None | SRR1183244 | Other | lineage4.9 | None | SRR1181514 | Sensitive | lineage4.9 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR18391760 | Other | La1.7.1 | None | SRR1208905 | Sensitive | lineage4.9 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | SRR1183458 | Sensitive | lineage4.9 | None | SRR10993953 | Other | La1.6 | None | SRR1182891 | Other | lineage4.9 | None | SRR1208710 | Sensitive | lineage4.9 | None | SRR1183695 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR1202421 | Other | lineage4.9 | None | SRR1181590 | Sensitive | lineage4.9 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR9787079 | Other | lineage6.1.3 | None | SRR1181428 | Other | lineage4.9 | None | SRR1202523 | Sensitive | lineage4.9 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | SRR1208431 | Sensitive | lineage4.9 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR1181287 | Sensitive | lineage4.9 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR1183259 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR1181499 | Other | lineage4.9 | None | SRR1180657 | Other | lineage4.9 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR1334032 | Other | lineage6.1.3 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809194 | RR-TB | lineage2.2.1 | None | ERR6362500 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR1180642 | Sensitive | lineage4.9 | None | SRR1180661 | Sensitive | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR1183086 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR1180519 | Other | lineage4.9 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | SRR4033342 | Sensitive | lineage2.2.1 | za | SRR1183210 | Sensitive | lineage4.9 | None | SRR1208789 | Sensitive | lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR1180466 | Sensitive | lineage4.9 | None |
|---|
