EBG00000313339 - n.2619C>A
Drug resistance types
12 Sensitive
8 RR-TB
2 HR-TB
11 MDR-TB
9 Pre-XDR-TB
2 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 1 |
| La1.3 | 1 |
| lineage2.2.1 | 17 |
| lineage4.9 | 22 |
| lineage3 | 7 |
| lineage4.8 | 7 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| La1.8.1 | 4 |
| lineage6.1.2 | 1 |
| lineage4.3.1.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage3.1.1 | 3 |
| lineage4.3.3 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13888750 | Other | La2 | None | ERR4769495 | Other | La1.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR7236330 | Other | La1.8.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR5818408 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR5818388 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4820290 | Other | lineage3 | None | SRR7236399 | Other | La1.8.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR7070320 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR3276144 | Other | lineage3 | nl | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR7236108 | Other | La1.8.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR5818452 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818446 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR4817434 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None |
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