EBG00000313339 - n.2878G>A
Drug resistance types
9 Sensitive
6 RR-TB
7 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 14 |
| lineage2.2.1 | 10 |
| lineage4.8 | 3 |
| La1.4 | 1 |
| lineage4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| 4 | |
| lineage4.1.2.1 | 9 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4 | 1 |
| lineage4.3.3 | 5 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage3 | 1 |
| lineage4.6 | 1 |
| lineage1 | 1 |
| lineage3 | 9 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage1.1.3.1 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| La1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.7;lineage4.3.4.2 | 2 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172987 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR2101388 | Sensitive | lineage4.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18910985 | Sensitive | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815210 | Other | lineage4.3.4.2 | gb | ERR4814362 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816231 | Other | lineage4 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816571 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817433 | Sensitive | lineage4.9;lineage3 | None | ERR4816699 | Other | lineage4.6 | None | ERR4818988 | Other | lineage1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817301 | Other | lineage4.9 | None | ERR2510634 | MDR-TB | lineage3 | None | ERR4818000 | Other | lineage3.1.1 | gb | ERR4818831 | Other | lineage3 | None | ERR4818752 | Other | lineage3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5152936 | MDR-TB | lineage2.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820299 | Sensitive | lineage4.1.1.3 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514590 | Sensitive | lineage4.1.1.3 | gb | ERR4820833 | HR-TB | None | ERR4820026 | Other | lineage3 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822068 | Sensitive | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821519 | Other | lineage3 | gb | ERR4821566 | RR-TB | lineage1.2.1.2.1 | None | SRR5818653 | Sensitive | dj | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818428 | Sensitive | lineage4.9 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046250 | Other | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR8600244 | Other | La1.8.1 | None | ERR3077969 | Other | La1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6896247 | Sensitive | lineage4.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR7516395 | MDR-TB | lineage2.2.1 | None | SRR7851312 | Other | La1.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR6197025 | Other | lineage4.7 | None | ERR6197028 | Other | lineage4.9 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR6197037 | MDR-TB | lineage4.3.4.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117826 | Other | lineage3.1.3 | None |
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