EBG00000313339 - n.2594T>A
Drug resistance types
34 Sensitive
12 RR-TB
20 HR-TB
25 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| La1.8.1 | 9 |
| lineage4 | 15 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1 | 25 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 9 |
| lineage3 | 6 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.8 | 5 |
| lineage3.1.1 | 2 |
| lineage6 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4.1.1.3 | 6 |
| lineage4.3.2.1 | 1 |
| 9 | |
| lineage4.2.1 | 4 |
| La1.2 | 1 |
| La2 | 1 |
| lineage1.1.2 | 4 |
| lineage1.2.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473323 | HR-TB | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800231 | Pre-XDR-TB | lineage2.2.1 | in | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR5979407 | Other | lineage3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5987447 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865787 | Sensitive | lineage4.1.2.1 | None | ERR6865855 | Sensitive | lineage4.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736837 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787336 | Other | lineage6 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173740 | Other | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173587 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR12882709 | Sensitive | lineage3.1.1 | None | SRR13199734 | Other | La1.2 | None | SRR13888750 | Other | La2 | None | SRR14801749 | Sensitive | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR161086 | Sensitive | lineage3.1.2 | mw | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR176827 | Sensitive | lineage1.1.2 | mw | ERR4820083 | Sensitive | lineage3.1 | gb | ERR216965 | HR-TB | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR2179816 | Sensitive | lineage4 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR1023509 | Other | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4816231 | Other | lineage4 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514146 | Other | lineage4.1.2.1 | gb | ERR4820742 | Other | lineage4.3.4.2.1 | None | SAMN02403525 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4821045 | Sensitive | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821148 | Sensitive | lineage4.1.2.1 | gb | SRR6046839 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4830533 | MDR-TB | lineage4.4.1.1.1 | za | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6896532 | Other | lineage4.9 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR502470 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6824423 | Sensitive | lineage4.4.2 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR7516342 | Sensitive | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971376 | MDR-TB | lineage4.4.1.1.1 | None | SRR8600276 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796597 | Other | lineage4 | None | ERR3283014 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468443 | Other | La1.8.1 | None | ERR3468776 | Other | La1.8.1 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4024770 | Sensitive | lineage4.1.2.1 | None | ERR4024892 | Sensitive | lineage4.1.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None |
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