EBG00000313325 - n.407G>A
Drug resistance types
46 Sensitive
9 RR-TB
8 HR-TB
10 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 28 |
| lineage1.1.3.2 | 3 |
| 4 | |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.8 | 4 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 6 |
| lineage4.4.1.1 | 2 |
| lineage3 | 4 |
| lineage4;lineage1.1 | 1 |
| lineage4 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.6.1.1 | 4 |
| lineage4.1.1 | 1 |
| La1.2 | 1 |
| La1.8.1 | 3 |
| lineage6.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage5.1.1;lineage4.8 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 3 |
| lineage3;lineage2.2 | 2 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.6.1;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR12882627 | Sensitive | lineage3.1.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR15315871 | Sensitive | lineage4.9 | None | ERR4814573 | Other | lineage1.1.3.2 | None | SRR15368973 | Other | None | SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR4818017 | Sensitive | lineage4.9 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817817 | Sensitive | lineage3 | None | ERR4819787 | Other | lineage4.1.2.1 | None | ERR4817564 | Sensitive | lineage4.8 | gb | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR245790 | Sensitive | None | SRR6982115 | Sensitive | lineage4 | None | ERR4821051 | Other | lineage1.2.1.2.1 | None | ERR2747620 | Sensitive | lineage4.9 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | ERR4820845 | MDR-TB | lineage4.8 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR7535053 | Sensitive | lineage3 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR144568 | Pre-XDR-TB | None | ERR4769478 | Other | La1.2 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR3801626 | Sensitive | lineage6.1.1 | None | ERR4407552 | Sensitive | lineage4.1.2.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR4800483 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR751349 | Sensitive | lineage5.1.1;lineage4.8 | gh | ERR751414 | MDR-TB | lineage4 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1106670 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1172300 | Sensitive | lineage1.1.2 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None |
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