EBG00000313339 - n.2939C>T


Drug resistance types
97 Sensitive 27 RR-TB 37 HR-TB 30 MDR-TB 14 Pre-XDR-TB 1 XDR-TB 207 Other
lineage Counts
lineage Count
lineage2.2 5
lineage4.9 177
lineage2.2.1 36
lineage4.2.2.1 1
lineage4.1.2.1 9
lineage2.2.2 1
La1.8.1 14
lineage4.6.5 1
lineage4.3 2
lineage4.6.1.2 1
lineage4.3.3 17
lineage4 13
lineage4.9;lineage1.1 1
La1.2 1
lineage4.4.2 2
La2 1
lineage1.1.2 1
lineage3 8
lineage3.1.2 2
La1.7.1 1
lineage1.2.1.2.1 2
lineage4.4.1.1 10
lineage4.1.1 9
lineage4.1.2;lineage3.1 2
lineage4.9.1 1
lineage4.3.4.2.1 12
lineage4.8 9
lineage1.1.3.2 4
lineage2.2.1.1 3
lineage4.4.1.1.1 4
lineage4.3.4.1 3
lineage4.1.2 5
lineage1.2.2.2 1
lineage1.1.3.1 1
lineage4.3.2 1
lineage1.1.1 1
lineage3.1.1 7
La3 1
lineage3.1.3 1
lineage4.1.1.3 3
lineage4.6.2.2 2
7
lineage2.2.1;lineage1.1.1 1
lineage4.7 4
lineage4.2.1.1 3
lineage1.1.1.1 1
lineage4.3.2.1 9
lineage4.4 1
lineage1 1
lineage4;lineage2.2.1 1
lineage4.8.1 1
lineage5.1.1 1
lineage4.3.4.2 1
lineage3.1.2.2 1
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
lineage4.1.4 1
lineage4.9;La1.8 1
La1.3 1
spoligotype Counts
spoligotype Count
None 413
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5865338 MDR-TB lineage2.2 None
ERR736837 Other lineage4.9 None
ERR6197032 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR7737918 MDR-TB lineage4.2.2.1 None
SRR11349188 MDR-TB lineage4.1.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10482944 Other La1.8.1 None
ERR7801176 RR-TB lineage4.6.5 None
ERR8025347 Sensitive lineage4.9 None
ERR9117760 HR-TB lineage4.3 None
ERR987757 MDR-TB lineage4.6.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10397130 Pre-XDR-TB lineage2.2.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1175472 MDR-TB lineage4 None
SRR1196545 HR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1175491 MDR-TB lineage4 None
SRR1184308 Sensitive lineage4.9 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR13423578 Other lineage2.2.1 None
SRR13199734 Other La1.2 None
SRR13423546 Other lineage4.4.2 None
SRR13861141 HR-TB lineage4.9 None
SRR13861143 Other lineage4.9 None
SRR13861150 Other lineage4.9 None
SRR13861142 Other lineage4.9 None
SRR13861147 Other lineage4.9 None
SRR13861144 Other lineage4.9 None
SRR13861157 Other lineage4.9 None
SRR13861156 Other lineage4.9 None
SRR13861162 Other lineage4.9 None
SRR13861158 Other lineage4.9 None
SRR13861183 Other lineage4.9 None
SRR13861161 Other lineage4.9 None
SRR13861175 Other lineage4.9 None
SRR13861182 RR-TB lineage4.9 None
SRR13861164 Other lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR13861195 Other lineage4.9 None
SRR13861187 Other lineage4.9 None
SRR13861201 Other lineage4.9 None
SRR13861207 Other lineage4.9 None
SRR13861200 Other lineage4.9 None
SRR13861231 Other lineage4.9 None
SRR13861243 HR-TB lineage4.9 None
SRR13861232 RR-TB lineage4.9 None
SRR13861240 HR-TB lineage4.9 None
SRR13861263 Other lineage4.9 None
SRR13861244 Other lineage4.9 None
SRR13861246 Other lineage4.9 None
SRR13861258 Other lineage4.9 None
SRR13861248 HR-TB lineage4.9 None
SRR13861286 Other lineage4.9 None
SRR13861281 Other lineage4.9 None
SRR13861297 Other lineage4.9 None
SRR13861294 Other lineage4.9 None
SRR13861299 RR-TB lineage4.9 None
SRR13861318 Other lineage4.9 None
SRR13861303 Other lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861312 Other lineage4.9 None
SRR13861307 Other lineage4.9 None
SRR13861314 Other lineage4.9 None
SRR13861324 Other lineage4.9 None
SRR13861351 Other lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861331 Other lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861328 Other lineage4.9 None
SRR13861343 Other lineage4.9 None
SRR13861392 Other lineage4.9 None
SRR13861372 Other lineage4.9 None
SRR13861356 Other lineage4.9 None
SRR13861369 Other lineage4.9 None
SRR13861379 Other lineage4.9 None
SRR13861383 Other lineage4.9 None
SRR13861389 Other lineage4.9 None
SRR13861410 MDR-TB lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861411 HR-TB lineage4.9 None
SRR13861403 Other lineage4.9 None
SRR13861406 MDR-TB lineage4.9 None
SRR13861416 Other lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR13861419 Other lineage4.9 None
SRR13861418 HR-TB lineage4.9 None
SRR13861423 Other lineage4.9 None
SRR13861421 Other lineage4.9 None
SRR13861429 Other lineage4.9 None
SRR13861428 Other lineage4.9 None
SRR13861431 Other lineage4.9 None
SRR13861433 Other lineage4.9 None
SRR13861443 RR-TB lineage4.9 None
SRR13861438 Other lineage4.9 None
SRR13861449 Other lineage4.9 None
SRR13861453 Other lineage4.9 None
SRR13861457 Other lineage4.9 None
SRR13861493 HR-TB lineage4.9 None
SRR13861459 HR-TB lineage4.9 None
SRR13861481 RR-TB lineage4.9 None
SRR13861486 Other lineage4.9 None
SRR13861482 Other lineage4.9 None
SRR13861491 RR-TB lineage4.9 None
SRR13861532 Other lineage4.9 None
SRR13861514 Other lineage4.9 None
SRR13861519 Other lineage4.9 None
SRR13861499 Other lineage4.9 None
SRR13861531 Other lineage4.9 None
SRR13861533 Other lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861534 Other lineage4.9 None
SRR13861544 Other lineage4.9 None
SRR13861555 Other lineage4.9 None
SRR13861586 Other lineage4.9 None
SRR13861562 Other lineage4.9 None
SRR13861567 Other lineage4.9 None
SRR13861566 Other lineage4.9 None
SRR13861569 Other lineage4.9 None
SRR13861589 RR-TB lineage4.9 None
SRR13861587 RR-TB lineage4.9 None
SRR13861627 Other lineage4.9 None
SRR13861597 Other lineage4.9 None
SRR13861600 Other lineage4.9 None
SRR13861608 Other lineage4.9 None
SRR13861630 Other lineage4.9 None
SRR13861631 RR-TB lineage4.9 None
SRR13861637 Other lineage4.9 None
SRR13861634 HR-TB lineage4.9 None
SRR13861651 Other lineage4.9 None
SRR13861641 Other lineage4.9 None
SRR13861639 Other lineage4.9 None
SRR13861642 Other lineage4.9 None
SRR13861654 Other lineage4.9 None
SRR13861653 Other lineage4.9 None
SRR13861668 Other lineage4.9 None
SRR13861658 Other lineage4.9 None
SRR13861673 Other lineage4.9 None
SRR13861683 Other lineage4.9 None
SRR13861669 Other lineage4.9 None
SRR13861682 Other lineage4.9 None
SRR13861692 Other lineage4.9 None
SRR13861689 Other lineage4.9 None
SRR13861706 Other lineage4.9 None
SRR13861694 Other lineage4.9 None
SRR13861714 Other lineage4.9 None
SRR13861718 Other lineage4.9 None
SRR13861725 Other lineage4.9 None
SRR13861720 Other lineage4.9 None
SRR13861727 Other lineage4.9 None
SRR13861735 MDR-TB lineage4.9 None
SRR13861724 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR13888750 Other La2 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15522850 HR-TB lineage1.1.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR17856664 Sensitive lineage3 None
SRR1791899 HR-TB La1.8.1 None
SRR1791940 Other La1.8.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18572455 Sensitive lineage4.9 None
SRR18213800 Other lineage3.1.2 None
SRR18391772 Other La1.7.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR19304114 Other lineage1.2.1.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101666 Sensitive lineage4.8 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101678 Sensitive lineage4.4.1.1.1 None
SRR2101681 Sensitive lineage4.8 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101730 Sensitive lineage4.1.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR21714045 HR-TB lineage2.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21714038 Sensitive lineage4.3.3 None
SRR22424765 MDR-TB lineage4 None
SRR21764246 Other lineage4.9 None
SRR3105736 Other lineage1.2.2.2 None
ERR037510 Other lineage1.1.3.2 mw
ERR4814700 Other lineage4.3.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814617 Other lineage1.1.3.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675273 Sensitive lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814911 Other lineage4.3.3 None
ERR4818536 Other lineage4.9 None
ERR4817134 HR-TB lineage2.2.1 None
ERR2229358 Other lineage4.8 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818655 Other lineage4.3.3 None
ERR2179857 RR-TB lineage4 None
ERR4818752 Other lineage3 None
ERR4818407 Other lineage4.3.2 None
ERR4817554 Other lineage1.1.1 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR4818548 Other lineage4.3.3 None
ERR4818570 Other lineage4.3.3 None
ERR4819131 Other lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819462 Other lineage4 None
ERR4819198 Other lineage2.2.1 None
ERR4819952 Sensitive La3 None
ERR4820478 Other lineage3.1.3 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820151 RR-TB lineage4.8 None
ERR2515032 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
ERR4821811 RR-TB lineage4.9 None
SRR6045683 Other lineage3.1.2 None
ERR4821286 Other lineage4.8 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR5818388 Other lineage4.9 None
SRR6045986 Other lineage3 None
SRR6044841 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045289 Other None
SRR6045205 Sensitive lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6046607 Other lineage3 None
ERR4799565 Sensitive lineage1.1.3.2 in
SRR6397406 Other lineage4.1.2.1 None
ERR2843513 Other lineage2.2.1;lineage1.1.1 None
SRR6397642 RR-TB None
SRR6397441 Other lineage4 None
SRR6397548 HR-TB lineage1.2.1.2.1 None
SRR6397575 Other lineage4.3.4.2.1 None
SRR6152979 Other lineage4.7 None
SRR6153036 Other None
SRR6397640 Other lineage4.2.1.1 None
SRR6397770 Other lineage4.7 None
SRR6397727 Other lineage4.2.1.1 None
SRR6982405 Sensitive None
SRR6397771 Other lineage1.1.1.1 None
SRR6982078 Sensitive None
ERR502483 Sensitive lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502482 Sensitive lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6982100 Sensitive lineage4.4.1.1.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR6982092 Other lineage4.3.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982102 Other lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982105 Sensitive lineage2.2.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982414 Sensitive lineage4.9 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982140 Other lineage2.2 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982196 Sensitive None
SRR6982195 RR-TB lineage4.4 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982198 HR-TB lineage1 None
SRR6982227 Other lineage4.1.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6896470 Sensitive lineage4.3.4.2.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982322 Sensitive lineage4.8.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR6982362 Other lineage4.3.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6855768 Other lineage4.3.2.1 None
SRR6981981 Other lineage4.3.3 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6981983 Sensitive lineage3.1.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982014 Other lineage4.1.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6855917 Other lineage4.8 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982056 Sensitive lineage4.3.4.2.1 None
SRR6982075 Sensitive lineage3 None
SRR6982064 Sensitive lineage4.1.1 None
ERR5162118 Other La1.8.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6856032 Sensitive lineage2.2.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR5162133 Other La1.8.1 None
ERR5311077 RR-TB La1.8.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982509 Sensitive lineage4.3.2.1 None
ERR5311080 Other La1.8.1 None
SRR6982558 Other lineage4.3.4.2 None
ERR037234 Sensitive lineage4.9 None
SRR8073606 Other La1.8.1 None
SRR8599999 Other La1.8.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR10796562 Other lineage4.3.4.1 None
ERR4819166 Other lineage3 gb
ERR072033 Sensitive lineage3.1.2.2 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1023527 RR-TB lineage4 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796596 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796626 Other lineage4.1.2 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3468488 RR-TB La1.8.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3797043 HR-TB None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4132447 HR-TB lineage4 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4188010 Other La1.8.1 None
ERR4188253 Other La1.8.1 None
ERR4627392 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769472 Other lineage4.9 None
ERR4769429 Other lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4799552 Pre-XDR-TB lineage2.2.1.1 None
ERR4769527 Sensitive lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4769546 Other La1.3 None