EBG00000313339 - n.2939C>T
Drug resistance types
118 Sensitive
9 RR-TB
10 HR-TB
14 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| lineage4.9 | 75 |
| lineage4.3.4.2.1 | 10 |
| lineage4.1.2.1 | 3 |
| lineage4.4.1.1 | 10 |
| lineage4.4.2 | 2 |
| lineage3.1;lineage4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 10 |
| La1.2.BCG | 4 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 2 |
| lineage2;lineage4 | 1 |
| La1.8.X-unk6 | 1 |
| lineage4.1.1.1 | 5 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage3 | 2 |
| lineage4.1.2 | 4 |
| lineage4.3.2.1 | 7 |
| lineage4.3.3 | 9 |
| lineage4.1.4 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8 | 5 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.1 | 4 |
| La2 | 1 |
| La1.2 | 1 |
| lineage1.1.3.2 | 4 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.7 | 3 |
| La1.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.2 | 2 |
| 1 | |
| lineage4 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 219 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR2101625 | Other | lineage3.1;lineage4.1.2 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR7240403 | Other | La1.8.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR1208536 | Other | lineage4.9 | None | SRR7240537 | Other | La1.8.1 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1202404 | Other | lineage4.9 | None | SRR1208476 | Other | lineage4.9 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7240420 | Other | La1.8.X-unk6 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR1208710 | Sensitive | lineage4.9 | None | SRR7504776 | Sensitive | lineage4.9 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR6982050 | Other | lineage4.3.4.1 | None | SRR7240324 | Other | La1.8.1 | None | SRR1208849 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR7504782 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR1915486 | Other | La1.2.BCG | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR7504783 | Sensitive | lineage4.9 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR7444072 | Sensitive | lineage4.9 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR2101827 | Other | lineage4.3.4.2.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR1202401 | Sensitive | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR176741 | Other | lineage4.9 | None | SRR1202706 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6855718 | Other | lineage4.8 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | ERR4188253 | Other | La1.8.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR17856664 | Sensitive | lineage3 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | ERR736831 | Other | lineage4.9 | None | SRR7443747 | Sensitive | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR7444102 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR1208604 | Sensitive | lineage4.9 | None | SRR1208872 | Sensitive | lineage4.9 | None | SRR1208804 | Sensitive | lineage4.9 | None | SRR7444098 | Sensitive | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | SRR1208261 | Sensitive | lineage4.9 | None | SRR1208642 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR037510 | Other | lineage1.1.3.2 | mw | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR7504786 | Sensitive | lineage4.9 | None | SRR1208885 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | SRR1208730 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR18391772 | Other | La1.7.1 | None | ERR4627392 | Other | La1.8.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR7504772 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR4799565 | Sensitive | lineage1.1.3.2 | in | SRR7443751 | Sensitive | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6981981 | Sensitive | lineage4.3.3 | None | SRR1202509 | Sensitive | lineage4.9 | None | SRR1208946 | Other | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR6982337 | Sensitive | lineage4.7 | None | ERR4769546 | Other | La1.3 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982484 | Other | lineage3.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR6982198 | HR-TB | lineage1 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1208645 | Sensitive | lineage4.9 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR1209003 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR7504773 | Sensitive | lineage4.9 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR6981939 | Other | lineage4.3.4.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR6982196 | Sensitive | None | ERR4188010 | Other | La1.8.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR7240398 | Other | La1.8.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR2179857 | Sensitive | lineage4 | None | SRR1202599 | Other | lineage4.9 | None | SRR1208165 | Sensitive | lineage4.9 | None | SRR1208447 | Sensitive | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR1208310 | Sensitive | lineage4.9 | None | SRR1202495 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6982430 | Sensitive | lineage4.3.4.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4769472 | Other | lineage4.9 | None | SRR6982328 | Other | lineage3.1.1 | None | SRR21764246 | Other | lineage4.9 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1208999 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR7504775 | Sensitive | lineage4.9 | None |
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