EBG00000313339 - n.2871A>G
Drug resistance types
25 Sensitive
17 RR-TB
8 HR-TB
22 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 25 |
| lineage4.9 | 60 |
| lineage4.1.1.1 | 2 |
| lineage4.3.3 | 8 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.8.1 | 3 |
| lineage5.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.8 | 12 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.6.5 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage3 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 2 |
| La1.6 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.6.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 160 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069638 | Pre-XDR-TB | lineage2.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR126603 | Sensitive | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR1182880 | Other | lineage4.9 | None | SRR1182900 | Sensitive | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR400350 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR6359064 | Sensitive | lineage4.9 | None | SRR1181569 | Other | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1183531 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR1180687 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4769472 | Other | lineage4.9 | None | SRR1181490 | Other | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4816610 | Other | lineage4.3.3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR718327 | HR-TB | lineage1.1.3.1 | th | ERR978765 | RR-TB | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | SRR1183402 | Other | lineage4.9 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR1182990 | Other | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1181422 | Other | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR1180569 | Sensitive | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | ERR212015 | Sensitive | lineage4.8 | None | SRR1183152 | Other | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1183281 | Other | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1181358 | Other | lineage4.9 | None | SRR1182927 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | DRR184902 | Sensitive | lineage2.2.1;lineage4.8 | vn | SRR1180486 | Other | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181589 | Other | lineage4.9 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | SRR6046291 | Other | lineage3 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR1182958 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1180597 | Other | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR867567 | RR-TB | lineage3 | None | SRR1183500 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1180113 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1180686 | Other | lineage4.9 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | SRR1183213 | Other | lineage4.9 | None | SRR10993944 | Other | La1.6 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR1181299 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1183548 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | ERR4814623 | Sensitive | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1181147 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | DRR099689 | Sensitive | lineage1.1.1.1 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR10796593 | Other | lineage4.3 | None | SRR1238558 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180503 | Other | lineage4.9 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1183170 | Other | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | ERR1679639 | Other | lineage4.6.4 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1183438 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | ERR4769423 | Other | La1.3 | None | SRR1183684 | Other | lineage4.9 | None | SRR1182954 | Other | lineage4.9 | None |
|---|
