EBG00000313325 - n.411T>A
Drug resistance types
67 Sensitive
11 RR-TB
13 HR-TB
25 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 17 |
| lineage3 | 19 |
| lineage5.1.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.2.1 | 10 |
| lineage1.1.2 | 9 |
| lineage4.4.1.1 | 3 |
| lineage1.2.2.2 | 8 |
| 7 | |
| lineage4.8 | 6 |
| lineage4.6 | 1 |
| lineage4.9 | 38 |
| lineage4.6.3 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.8.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 3 |
| lineage4;lineage3.1 | 1 |
| lineage4.6.4 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.1.2 | 1 |
| lineage2.2 | 2 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.9;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02599073 | Sensitive | lineage2.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4815985 | Other | lineage5.1.2 | None | ERR4817342 | Other | lineage4.1.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR4816429 | Other | lineage1.1.2 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR1034791 | RR-TB | None | ERR2229360 | Other | lineage4.8 | None | ERR2510807 | Other | lineage4.6 | None | ERR4817817 | Sensitive | lineage3 | None | ERR4818017 | Sensitive | lineage4.9 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | SAMN02599089 | MDR-TB | lineage3 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR245790 | Sensitive | None | ERR4818312 | Sensitive | lineage4.4 | gb | SAMN02599130 | MDR-TB | lineage3 | None | ERR4817564 | Sensitive | lineage4.8 | gb | ERR4818436 | Other | lineage4.8 | None | ERR4819200 | Sensitive | lineage4.9 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819525 | Other | lineage3 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2515447 | Sensitive | lineage2.2.1 | None | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | ERR4819787 | Other | lineage4.1.2.1 | None | ERR4820524 | Sensitive | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR4820845 | MDR-TB | lineage4.8 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR2515999 | Sensitive | lineage4.3.4.2.1 | None | ERR4820537 | HR-TB | lineage1.2.2.2 | None | ERR4821051 | Other | lineage1.2.1.2.1 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6045683 | Other | lineage3.1.2 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR2747620 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046152 | Other | lineage4.9 | None | ERR4829036 | Other | lineage4.8 | None | ERR4829618 | Sensitive | lineage4.1.2.1 | it | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4829692 | Sensitive | lineage4.1.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4829728 | MDR-TB | lineage4.2.1 | it | ERR4831631 | HR-TB | lineage4.9 | None | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | SRR6855957 | Sensitive | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6896534 | Sensitive | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | ERR5162127 | Sensitive | lineage4.9 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR323039 | HR-TB | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR8600310 | Other | La1.8.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR1063855 | Other | lineage4 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR3283053 | Other | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR3470682 | Other | lineage3 | None | ERR3797060 | Other | La1.8.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR473308 | HR-TB | lineage4.3.4.2.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751414 | MDR-TB | lineage4 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR970455 | RR-TB | lineage4.1.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172949 | Sensitive | lineage1.1.2 | None | SRR1172861 | MDR-TB | lineage3 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173599 | Sensitive | lineage1.1.2 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174295 | HR-TB | lineage1.2.2.2 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1181051 | MDR-TB | lineage4.4.1.1 | None | SRR11972168 | Sensitive | lineage3 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR15368973 | Other | None | SRR16156291 | Other | lineage4.9 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18149443 | Sensitive | lineage3 | None | SRR1791910 | Other | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR19303931 | Other | lineage2.2.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815278 | Other | lineage4.8 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4815005 | Other | lineage4.1.2.1 | None |
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