EBG00000313339 - n.2599A>G


Drug resistance types
80 Sensitive 46 RR-TB 25 HR-TB 28 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 242 Other
lineage Counts
lineage Count
lineage2.2 1
lineage2.2.1 42
lineage4.9 37
lineage4.2.2.2 7
lineage6.1.3 1
lineage3.1.3 2
lineage3.1.1 6
lineage4.3.1.1 2
lineage4.1.2.1 26
lineage4.8.1 2
lineage4.8 50
lineage3.1 2
lineage3 49
lineage4.3.4.2.1 14
lineage6.2.3;lineage1.1.2 1
lineage4.7 4
lineage4.3.4.1 2
lineage4.6.2.2 5
lineage4.3 2
lineage4.2.2.1 1
lineage3.1.2 3
lineage4.3.3 12
lineage6.3.1 1
La1.8.1 8
lineage4.3.2.1 1
lineage4 9
lineage2 2
lineage4.5 3
lineage4.9;lineage1.1 1
lineage4.9;lineage4.3.4 1
lineage4.3.4 1
lineage4.1.1.3 11
lineage4.8;lineage2.2.1 1
35
lineage4.4.1.2 2
lineage3.1.2.1 1
lineage4.1.1.3.1 3
lineage4.4.1.1 12
lineage1.1.2 5
lineage4.3.4.2 6
lineage3.1.2.2 3
lineage4.4.2 4
lineage2.2.2 2
lineage1.1.3.2 2
lineage1.2.2.1 2
lineage4.1.2 4
lineage1.1.1.1 3
lineage2.2.1.1 3
lineage4.6.1.2 3
lineage4.1.1.3.1;lineage3.1.2 1
lineage4.2 1
lineage1.2.2.2 2
lineage4.9;lineage3.1.1 1
lineage5 1
lineage4.1.1 1
lineage5.1 1
lineage1.1.1 1
lineage4;lineage1.2.2.1 1
lineage4.8;lineage3 1
lineage4.1 3
lineage1.1.3.3 1
lineage4.1.1.1 1
lineage4.6.4 1
lineage6 1
lineage1.1.3.1 1
lineage4.2.1.1 1
lineage4.4.1.1.1 1
lineage4;lineage3 1
lineage4.2.1 1
lineage4.6.5 1
lineage4.2.2 1
lineage4.8;lineage4.2.1.1 1
lineage4.6.1 1
La1.7.1 1
lineage4.3.1 1
lineage6.2.2 1
La1.3 1
lineage4.1.3 1
lineage1 1
lineage4.3.2 2
lineage4.1.4 1
spoligotype Counts
spoligotype Count
None 436
Geographic prevalence
Country level data for this variant is available for 87 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR5818395 Sensitive lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818684 Other lineage4.2.2.2 None
SRR6045496 Other lineage6.1.3 None
SRR6045613 Other lineage3.1.3 None
SRR6046275 Other lineage3.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6824572 MDR-TB lineage2.2.1 None
SRR6367397 Other lineage4.1.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR6855695 Sensitive lineage4.8 None
SRR7131161 Other lineage4.8 None
ERR2027290 RR-TB lineage3.1 None
ERR017781 Other lineage3 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR036247 Sensitive lineage4.3.4.2.1 mw
ERR181771 Sensitive lineage3.1.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR2512599 Other lineage3 gb
ERR2514261 Other lineage3 None
ERR2514834 Other lineage4.7 None
ERR3275190 Other lineage3 nl
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR2512884 Other lineage4.6.2.2 gb
ERR3275941 RR-TB lineage4.3 nl
ERR4818691 Other lineage4.8 None
ERR4817047 Other lineage4.2.2.1 gb
ERR4818200 Other lineage3.1.2 gb
ERR4812474 Sensitive lineage4.3.3 pe
ERR4818663 Other lineage3 None
ERR4818897 Other lineage4.1.2.1 gb
ERR9117760 HR-TB lineage4.3 None
ERR4819324 Other lineage4.8 gb
ERR4820290 Other lineage3 None
ERR502523 Other lineage6.3.1 None
ERR4820193 Other lineage3 None
SRR1792011 Other La1.8.1 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR1175491 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR12199485 Other lineage2 None
SRR1175512 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR18003036 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003049 Other lineage2.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796592 Other lineage4 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796578 Other lineage2.2.1 None
ERR10796571 Other lineage4.9 None
ERR10796629 Other lineage4 None
ERR4820151 RR-TB lineage4.8 None
ERR10796577 RR-TB lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
SAMEA3501065 RR-TB lineage4.8 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR2514926 Other lineage4.6.2.2 gb
ERR4820742 Other lineage4.3.4.2.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4819175 Other lineage4.1.1.3 gb
DRR184902 Sensitive lineage4.8;lineage2.2.1 vn
SRR5818470 Other None
SRR5818414 Other None
SRR6397733 Other lineage4.4.1.2 None
SRR3675496 Other lineage4.1.1.3 gb
SRR5341222 Sensitive lineage3.1 None
ERR4819011 Other lineage3.1.2.1 None
SRR6045876 Other lineage3 gb
ERR2512606 MDR-TB lineage3 None
SRR5818430 Sensitive None
SRR6045178 Other lineage3 None
ERR4820846 RR-TB lineage4.6.2.2 gb
SRR5818388 Other None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR3675533 Sensitive lineage3 None
SRR6045899 Other lineage4.1.2.1 gb
ERR4815783 Other lineage4.1.2.1 gb
ERR1750899 Sensitive lineage4.1.1.3 zw
ERR4821718 Sensitive lineage4.2.2.2 gb
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR6046646 Other lineage4.7 gb
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4820001 Sensitive lineage4.8 gb
ERR3275866 Other lineage4.1.2.1 nl
ERR4818556 Other lineage3 None
ERR4816800 Other lineage4.8 gb
SRR6044958 Other lineage4.4.1.1 None
SRR6046534 Other lineage1.1.2 None
ERR4818401 HR-TB lineage2.2.1 gb
ERR4821477 Other lineage4.8 None
ERR4819017 RR-TB lineage3 None
ERR2510794 Other lineage4.3.4.2 None
SRR6046440 Other lineage3.1.2.2 None
SRR5818462 Other None
ERR4819579 HR-TB lineage4.3.3 None
ERR4816462 Other lineage4.1.2.1 None
ERR2513082 Other lineage4.1.2.1 gb
ERR2229436 Other lineage4.8 None
SRR5818446 Other None
SRR5818663 Sensitive lineage4.1.2.1 dj
ERR2514949 Sensitive lineage3 gb
SRR5818402 Other None
SRR3675565 Other lineage4 None
SRR2101471 RR-TB lineage4.4.1.1 None
SRR6824423 Sensitive lineage4.4.2 None
ERR037535 Sensitive lineage4.3.4.2.1 None
DRR184903 Sensitive lineage2.2.2 None
ERR4821519 Other lineage3 gb
SRR6045843 Other lineage4.2.2.2 None
ERR2229733 Other lineage4.8 dk
SRR6046208 Other lineage4.8 None
ERR4821917 Sensitive lineage1.1.3.2 gb
SAMEA3501073 RR-TB lineage4.8 None
SRR6045849 Other lineage4.4.1.1 None
SRR3675590 Sensitive lineage4.8.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR2512841 HR-TB lineage2.2.1 gb
ERR4818261 Other lineage1.1.2 None
ERR2446456 HR-TB lineage4.4.1.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR5818469 Other None
SRR6046517 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR4814763 Other lineage2.2.1 None
ERR2513910 Other lineage3 gb
SRR2101506 Sensitive lineage1.2.2.1 None
ERR4816561 Sensitive lineage3 gb
ERR176489 Sensitive lineage4.3.4.2.1 None
SRR4035746 Sensitive lineage4.1.2 None
SRR5818449 MDR-TB None
ERR2446509 Other lineage3 nl
SRR3675230 RR-TB lineage3 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4818050 Other lineage4.6.2.2 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR4817434 Other lineage3 None
SRR6046612 Other lineage1.1.1.1 None
ERR2228838 RR-TB lineage4.8 None
ERR176619 Sensitive lineage4.9 None
SRR6046343 Other lineage2.2.1 None
ERR2503533 Other lineage4.1.2.1 fi
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818399 Sensitive None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR8651566 Pre-XDR-TB lineage2.2.1 None
SRR5818423 MDR-TB None
SRR5818436 Sensitive None
ERR4831863 HR-TB lineage2.2.1.1 None
ERR2515077 Sensitive lineage3 gb
ERR2513904 Other lineage3.1.2.2 gb
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR126603 Sensitive lineage4.3.3 None
ERR4817628 Sensitive lineage4.8 gb
ERR036207 Other None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR4822085 Other lineage4.8 gb
SRR6152980 HR-TB lineage4.8 ca
SRR5818386 Other None
SRR3675245 Other lineage4.1.2.1 None
SRR2100877 HR-TB lineage4.1.2 None
SRR6044983 Other lineage3.1.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR216910 Sensitive lineage4.3.4.2.1 None
ERR4812328 Other lineage4.3.3 pe
SRR5818426 Other None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR5818630 Other lineage2.2.1 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR2179737 HR-TB lineage4.2 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR2179816 Sensitive lineage4 None
ERR4816270 Other lineage4.1.2.1 None
ERR2514550 MDR-TB lineage3 gb
ERR176565 Sensitive lineage4.3.4.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR6046484 Other lineage1.2.2.2 None
SAMEA3450033 Other lineage4.8 None
ERR4817874 Other lineage3 None
ERR4821286 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
ERR1750924 Sensitive lineage4.8 za
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818690 Other lineage4.2.2.2 None
ERR4816831 Other lineage4.1.2.1 None
SRR6046679 Other lineage3 gb
ERR4814994 HR-TB lineage2.2.1 gb
ERR2228815 RR-TB lineage4.8 None
ERR212084 Sensitive lineage1.2.2.1 None
SRR2100067 Other lineage4.3.3 None
ERR4817189 Other lineage4.7 None
ERR2515055 Other lineage3 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR5818389 Other None
SRR5818404 Other None
SRR5818464 Other None
ERR3276144 Other lineage3 nl
SRR5818411 MDR-TB None
SRR6397815 Other lineage4.4.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SAMEA3501063 RR-TB lineage4.8 None
SRR6045516 Other lineage3.1.1 None
ERR2179695 Sensitive lineage4.5 None
SRR5818448 Other None
SRR5818398 Other None
ERR2229541 Other lineage4.8 None
ERR4816009 Other lineage1.1.2 None
ERR4816967 RR-TB lineage5 None
ERR212114 Other lineage4.3.4.2.1 None
DRR184982 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR171135 Other lineage2.2.1 za
ERR1750938 Sensitive lineage4.4.1.1 None
SRR5007161 RR-TB lineage4.1.1 None
SRR6045422 Other lineage4.3.1.1 None
SRR5818434 Sensitive None
ERR6359069 Sensitive lineage5.1 None
SRR5818437 MDR-TB None
ERR2228910 Other lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR2229204 Other lineage4.8 None
ERR4820891 Other lineage4.9 gb
ERR4819546 HR-TB None
ERR2228900 RR-TB lineage4.8 None
SRR6045295 Other lineage4.7 None
SAMEA3501067 RR-TB lineage4.8 None
ERR2512423 Other lineage4.1.1.3 None
ERR4818831 Other lineage3 None
SRR5818425 Other None
ERR4817554 Other lineage1.1.1 None
ERR2229325 Other lineage4.8 dk
DRR185000 Other lineage1.1.1.1 None
SRR5818458 Other None
SRR6044904 Other lineage3 None
SRR5818385 Other None
SRR4033549 HR-TB lineage2.2.2 None
SRR5818408 Other None
ERR2886463 Sensitive lineage2.2.1 None
SRR5818459 Other None
ERR4817948 Other lineage3 gb
ERR212112 Sensitive lineage4;lineage1.2.2.1 None
ERR4821679 Other lineage4.3.3 None
SRR5341295 Sensitive lineage1.2.2.2 in
SRR6046219 Other lineage4.8;lineage3 gb
ERR2514516 Sensitive lineage3 gb
SRR5818409 Other None
ERR4815994 Other lineage3 gb
ERR4819547 HR-TB lineage2.2.1 gb
ERR2229540 Other lineage4.8 None
ERR2432997 Other lineage4.8 None
ERR2512443 Sensitive lineage4.8 gb
ERR212015 Sensitive lineage4.8 None
ERR2514351 Sensitive lineage3 gb
SAMEA3501070 RR-TB lineage4.8 None
ERR2229147 Other lineage4.8 None
ERR4815502 Other lineage4.1 None
ERR2515032 Other lineage3 None
ERR2515769 Sensitive lineage2.2.1 za
SRR5709926 MDR-TB lineage2.2.1 None
ERR221563 Sensitive lineage1.1.3.2 mw
SRR6045621 Other lineage4.1.1.3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4828450 Sensitive lineage1.1.1.1 vn
SRR2100532 Sensitive lineage3 None
SRR5818452 Other None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045312 Other lineage1.1.3.3 None
SAMEA3501052 RR-TB lineage4.8 None
SRR5818445 Other None
ERR2229369 Other lineage4.8 None
SRR6045749 Other lineage4.1.1.1 gb
SRR6046442 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6046864 Other lineage3 gb
SRR5818397 Other None
ERR4820275 HR-TB lineage4.4.1.2 gb
ERR2515230 Sensitive lineage4.8 None
ERR161113 Other lineage4.8 mw
ERR1679639 Other lineage4.6.4 None
ERR037485 Sensitive lineage4.3.4.2.1 mw
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR038289 Other lineage4.3.3 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR4187993 Other La1.8.1 None
ERR3806588 Other lineage6 None
ERR4815550 Other lineage4 None
ERR4811101 Other lineage4.4.2 None
ERR4815310 Other None
ERR4817398 Other lineage3.1.1 None
ERR4818724 Other lineage4.1.2.1 gb
ERR4817435 Other lineage1.1.3.1 None
ERR4817730 Other lineage4.2.1.1 gb
ERR4819166 Other lineage3 gb
ERR4828843 MDR-TB lineage4.2.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4821105 Other lineage3.1.2 gb
ERR4822150 Other lineage4.8 gb
ERR4819766 Other lineage4.4.1.1 None
ERR4829835 HR-TB lineage4.8 it
SRR1181390 Sensitive lineage2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR11349207 RR-TB lineage2.2.1 None
ERR736818 Sensitive lineage4.3.3 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR12882374 Sensitive lineage3.1.1 None
SRR19304083 Other lineage4.4.1.1 None
SRR5818393 Other lineage4.9 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5818391 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6044769 Other lineage1.1.2 None
SRR5818394 Other lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR6785301 Sensitive lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR7585400 MDR-TB lineage3 None
SRR7645906 Other lineage2.2.1 None
SRR8600071 Other La1.8.1 None
ERR2228810 RR-TB lineage4 None
ERR10796563 Other lineage4.3.3 None
SRR9970980 Other lineage4.1.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR1750889 Other lineage4.4.1.1 None
ERR2027252 Other lineage4.8;lineage4.2.1.1 None
ERR4187912 Other La1.8.1 None
ERR2229760 Other lineage4.8 dk
ERR2510804 Other lineage2.2.1 None
ERR4025018 Other lineage4.1.2.1 None
ERR4769406 Other lineage4.9 None
ERR4814841 Other lineage4.1 None
ERR4769508 RR-TB lineage4.9 None
ERR4814554 Other lineage4.1 None
ERR4816569 Other lineage4.3.3 gb
ERR4815815 Sensitive lineage4 None
ERR4814911 Other lineage4.3.3 None
ERR4821371 Other lineage4.8 gb
ERR4817306 Other lineage3 gb
ERR4819567 Other lineage2.2.1 None
ERR4820736 Other lineage4.1.2.1 gb
ERR4819636 Other lineage3.1.2 None
ERR4820026 Other lineage3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
ERR9786558 Sensitive lineage4.3.4.2 None
ERR5311088 Other La1.8.1 None
ERR6197032 Other lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1175473 Other lineage4.9 None
SRR1173421 RR-TB lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR5818432 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR2100537 Sensitive lineage3 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR5818440 Other lineage4.9 None
SRR13180246 HR-TB lineage4.8 None
SRR16156775 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR21469201 Other La1.7.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR6046089 Other lineage4.1.2.1 None
SRR6045384 Other lineage4.1.2 None
SRR7131018 Sensitive lineage4.3.1 None
SRR6982246 Sensitive lineage4 None
SRR7131068 Other lineage4.8 None
SRR7585435 Other lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796568 Other lineage4.9 None
ERR2228813 Other lineage4.8 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR176780 Sensitive lineage4.9 None
ERR019855 Other lineage3 None
ERR2510749 Sensitive lineage4.1.2.1 it
ERR2509885 RR-TB lineage3 None
ERR3276155 Other lineage4.1.2.1 nl
ERR3283008 Other lineage4.9 None
ERR4814584 Sensitive lineage4.4.2 None
ERR3797013 Other La1.8.1 None
ERR3804140 Sensitive lineage6.2.2 None
ERR4187869 Other La1.8.1 None
ERR4596902 HR-TB lineage3 None
ERR4769408 Other La1.3 None
ERR4815143 HR-TB lineage4.2.2.2 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4816650 Sensitive lineage4.1.2.1 None
ERR4817555 RR-TB lineage3 None
ERR4815471 Other lineage4.9 None
ERR4815816 Other lineage4.5 gb
ERR4815780 MDR-TB lineage4.1.3 None
ERR4816690 Other None
ERR4818176 Other lineage4.1.2.1 None
ERR4818126 RR-TB lineage1 None
ERR4818272 Other lineage4.3.2 None
ERR4819198 Other lineage2.2.1 None
ERR4818825 HR-TB lineage4.1.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4819528 RR-TB lineage3 None
ERR4828962 Other lineage4.1.4 it
ERR4821761 Other lineage3 gb
ERR6359070 Other lineage4.9 None
ERR5311076 Other La1.8.1 None
ERR4829207 Other lineage2.2.1 None
ERR4829233 Other lineage2.2.1 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR9117826 Other lineage3.1.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR13180205 Sensitive lineage4.1.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181130 Other lineage4.1.1.3 None
SRR1181214 Other lineage4.9 None
SRR15522850 HR-TB lineage1.1.2 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR19303818 Other lineage4.3.4.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None