EBG00000313325 - n.305T>G
Drug resistance types
17 Sensitive
28 RR-TB
13 HR-TB
5 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
167 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| lineage4.4.1.1 | 6 |
| La1.8.1 | 2 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| lineage4.5 | 2 |
| lineage1.1.2 | 9 |
| lineage4.3.3 | 13 |
| lineage3 | 22 |
| lineage3.1.1 | 7 |
| lineage2.2.1 | 30 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.3 | 4 |
| lineage4.3 | 2 |
| lineage4.8 | 21 |
| lineage4.8.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 6 |
| lineage4.1.2.1 | 31 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1 | 5 |
| lineage4.1.1 | 2 |
| lineage4.1 | 1 |
| lineage3.1.2.1 | 3 |
| 2 | |
| lineage4 | 7 |
| lineage6.2.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.7 | 4 |
| lineage4.6 | 2 |
| lineage1.1.1 | 3 |
| lineage4.6.2.2 | 3 |
| lineage1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3.1 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage3.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| La3 | 1 |
| lineage4.3.1.1 | 3 |
| lineage6.1.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 248 |
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR2514173 | Other | lineage4.5 | gb | ERR9117730 | Other | lineage1.1.2 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR5979407 | Other | lineage3 | None | ERR846990 | Sensitive | lineage4.9 | None | ERR2514179 | Sensitive | lineage3.1.1 | gb | ERR2514756 | Sensitive | lineage3 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR6865446 | Other | lineage4.4.1.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815618 | Other | lineage4.8 | None | SRR22175247 | XDR-TB | lineage2.2.1 | None | ERR4815118 | Other | lineage2.2 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4814911 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4815060 | Other | lineage3 | None | ERR4816025 | Sensitive | lineage3 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816001 | Other | lineage3 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4816227 | RR-TB | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816183 | Other | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4816232 | Other | lineage4 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4817110 | Other | lineage4.1.1.3 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229369 | Other | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816746 | Sensitive | lineage4.8 | None | ERR4816872 | Other | lineage4.7 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818752 | Other | lineage3 | None | ERR2515055 | Other | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818949 | Sensitive | lineage3.1.1 | None | ERR4818548 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4820209 | HR-TB | lineage4.1.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4817604 | Sensitive | lineage4.8 | None | ERR2512941 | Other | lineage1.1.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817533 | Sensitive | lineage4.1.2.1 | None | ERR4817645 | Other | lineage4.8 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819131 | Other | lineage4 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819313 | Other | lineage3.1.1 | None | ERR4820290 | Other | lineage3 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4819525 | Other | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR2514533 | Other | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR4820478 | Other | lineage3.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819867 | Other | lineage1.1.3.2 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR4820107 | RR-TB | None | ERR4820614 | Other | lineage3.1.2 | None | ERR4820132 | Other | lineage4.1.2 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4820918 | Other | lineage4.9 | None | ERR4820194 | Other | La3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822068 | Sensitive | lineage4.1.2.1 | None | ERR4822076 | Other | lineage4.1.2.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821530 | HR-TB | lineage4.3.4.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822270 | MDR-TB | lineage4.2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045584 | Sensitive | lineage4.1.2.1 | None | SRR5818466 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR6046442 | Other | lineage3 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046737 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4815178 | Other | lineage4.8 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR6856089 | Other | lineage2.2.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4816800 | Other | lineage4.8 | gb | SRR9971229 | RR-TB | lineage4.3.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | SRR9971223 | Other | lineage2.2.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR10796563 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4820787 | Other | lineage3.1.1 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR4821761 | Other | lineage3 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4822150 | Other | lineage4.8 | gb |
|---|
