EBG00000313325 - n.439C>T


Drug resistance types
8 Sensitive 10 RR-TB 10 HR-TB 19 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 64 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage2.2 2
lineage1.2.1.2.1 1
lineage4.6.1.1 2
6
lineage4.1.2.1 5
lineage3.1 1
La1.8.1 14
lineage4.6.2.2 1
lineage4.2.2.2 1
lineage4.9 43
lineage4.9;lineage4.2.1 1
lineage4.4.2 1
lineage3 2
lineage4 6
lineage4.3.4.2 1
lineage6.2.3;lineage1.1.2 1
lineage5.1.1 2
lineage4.6.1 2
lineage4.7 1
lineage4.1.1.3 1
lineage4.3.3 2
lineage2.2.2 2
lineage4.8;lineage4.3.3 1
lineage4.6.1.2 1
lineage4.6.1;lineage3.1 1
lineage2.2.1.1 2
lineage4.4.1.2 1
La1.7.1 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR2514181 Other lineage1.2.1.2.1 None
SAMN02381005 Other lineage4.6.1.1 None
SRR5818386 Other None
SRR5818426 Other None
ERR4817976 HR-TB lineage4.1.2.1 None
ERR2510804 Other lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR2693235 Other La1.8.1 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819784 Other lineage4.1.2.1 None
ERR2693247 Other La1.8.1 None
SRR5818445 Other None
ERR2693236 Other La1.8.1 None
ERR2693246 Other La1.8.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR5818393 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818409 Other lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818457 Other lineage4.9 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR5818385 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818423 MDR-TB lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR5818440 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR2851354 RR-TB lineage4.9 None
SRR7131142 Other lineage3 None
SRR7131195 Other lineage2.2.1 None
ERR4829269 Sensitive lineage3 None
ERR5087596 Other La1.8.1 None
SRR7131145 Other lineage4.1.2.1 None
ERR10796593 RR-TB lineage4 None
ERR323039 HR-TB None
ERR10796555 Other lineage4.1.2.1 None
ERR10796559 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
DRR184982 RR-TB lineage2.2.1 None
ERR036207 Other lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796597 Other lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796630 HR-TB None
ERR10796634 Other lineage4 None
ERR3797027 Other La1.8.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283008 Other lineage4.9 None
ERR3797032 Other La1.8.1 None
ERR3797031 Other La1.8.1 None
ERR4627312 Other La1.8.1 None
ERR4187701 Other La1.8.1 None
ERR4187814 Other La1.8.1 None
ERR4187821 Other La1.8.1 None
ERR4187652 Other lineage4.9 None
ERR4187823 Other La1.8.1 None
ERR4187826 Other La1.8.1 None
ERR4769472 Other lineage4.9 None
ERR751330 MDR-TB lineage5.1.1 None
SRR1062937 HR-TB lineage4.6.1 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR751338 Other lineage5.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1013610 HR-TB lineage4 None
SRR1013618 MDR-TB None
SRR1048992 HR-TB lineage2.2.2 None
SRR1062895 Other lineage4.6.1.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062933 Sensitive lineage4.9 None
SRR1140586 HR-TB lineage4.9 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1140627 Other lineage4.6.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1173185 HR-TB lineage4.9 None
SRR1173832 MDR-TB lineage4.6.1;lineage3.1 None
SRR1175473 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR21469201 Other La1.7.1 None
SRR19303820 RR-TB lineage4.8 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None