EBG00000313325 - n.439C>T
Drug resistance types
9 Sensitive
10 RR-TB
11 HR-TB
19 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage4.6.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1 | 15 |
| La1.8.1 | 14 |
| 6 | |
| lineage4.9 | 43 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3 | 2 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4 | 6 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage5.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.8;lineage4.3.3 | 1 |
| lineage4.6.1 | 2 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 1 |
| La1.7.1 | 1 |
| lineage2.2 | 2 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2693236 | Other | La1.8.1 | None | ERR2693235 | Other | La1.8.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR5818445 | Other | None | ERR2693246 | Other | La1.8.1 | None | SRR5818413 | HR-TB | lineage4.9 | None | ERR2693247 | Other | La1.8.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | ERR4829269 | Sensitive | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131142 | Other | lineage3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR323039 | HR-TB | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796630 | HR-TB | None | ERR10796594 | Other | lineage4.9 | None | ERR3797031 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797027 | Other | La1.8.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR4187826 | Other | La1.8.1 | None | ERR3797032 | Other | La1.8.1 | None | ERR4187823 | Other | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4187701 | Other | La1.8.1 | None | ERR4187814 | Other | La1.8.1 | None | ERR4187821 | Other | La1.8.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR4627312 | Other | La1.8.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1013618 | MDR-TB | None | SRR1013610 | HR-TB | lineage4 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140740 | RR-TB | lineage4.6.1.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814723 | Sensitive | lineage4.1.2.1 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR5818386 | Other | None | SRR5818426 | Other | None |
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