EBG00000313339 - n.2944G>A
Drug resistance types
101 Sensitive
14 RR-TB
21 HR-TB
21 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 13 |
| lineage4.9 | 40 |
| lineage4.8 | 7 |
| lineage1.1.3.2 | 3 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1 | 23 |
| lineage4.4.1.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.1.2.1 | 5 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4 | 9 |
| lineage3.1.1 | 5 |
| lineage4.9;La1.8 | 1 |
| La1.3 | 1 |
| lineage2.2 | 4 |
| lineage4.6.1.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.3.3 | 10 |
| lineage4.9;lineage1.1 | 1 |
| La1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.1.2 | 1 |
| La2 | 1 |
| lineage3 | 6 |
| La1.7.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2.1 | 12 |
| lineage4.1.1 | 9 |
| lineage4.3.2.1 | 9 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.4.1.1 | 9 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 5 |
| lineage4.1.1.3 | 3 |
| lineage1.2.2.2 | 1 |
| La3 | 1 |
| lineage3.1.3 | 1 |
| 4 | |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.7 | 2 |
| lineage4.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 218 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8599999 | Other | La1.8.1 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037510 | Other | lineage1.1.3.2 | mw | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4188010 | Other | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188253 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4627382 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5865338 | MDR-TB | lineage2.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10482944 | Other | La1.8.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12830378 | Sensitive | lineage4.3.3 | None | SRR13199734 | Other | La1.2 | None | SRR13423578 | Other | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR18391772 | Other | La1.7.1 | None | SRR19317565 | Sensitive | lineage2.2.1.1 | None | SRR19304114 | Other | lineage1.2.1.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2100509 | Sensitive | lineage3 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101490 | Sensitive | lineage4.3.4.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR3675273 | Sensitive | lineage3 | None | SRR21764246 | Other | lineage4.9 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4814523 | Sensitive | lineage4.1.2 | gb | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR2179857 | RR-TB | lineage4 | None | ERR4819952 | Sensitive | La3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR2229221 | Sensitive | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR228150 | Sensitive | lineage3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045289 | Other | None | SRR6046607 | Other | lineage3 | None | SRR6982405 | Sensitive | None | ERR2843513 | Other | lineage2.2.1;lineage1.1.1 | None | SRR6982078 | Sensitive | None | ERR323037 | HR-TB | lineage4 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982196 | Sensitive | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982322 | Sensitive | lineage4.8.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6896470 | Sensitive | lineage4.3.4.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6855768 | Other | lineage4.3.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982064 | Sensitive | lineage4.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | ERR5311080 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None |
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