EBG00000313325 - n.870C>T
Drug resistance types
92 Sensitive
2 RR-TB
59 HR-TB
36 MDR-TB
34 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 4 |
| lineage4 | 7 |
| lineage4.3 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9 | 34 |
| lineage4.1.2.1 | 14 |
| lineage5.1.1 | 2 |
| lineage4.1.2 | 9 |
| La1.8.1 | 26 |
| lineage1.1.3.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage6.2.2 | 2 |
| La1.8 | 1 |
| La1.3 | 3 |
| lineage4.1.1.3 | 2 |
| La1 | 1 |
| La1.2 | 4 |
| lineage4.3.3 | 5 |
| lineage1.1.1 | 3 |
| lineage2.2.1.1 | 6 |
| lineage2.2 | 21 |
| lineage2.2.1 | 44 |
| lineage4.3.1.1 | 3 |
| lineage1.1.1.1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.8 | 7 |
| lineage2.2.2 | 17 |
| lineage3 | 7 |
| 13 | |
| lineage4;lineage2.2.2 | 1 |
| lineage4.4.2 | 4 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 5 |
| lineage4.9;lineage2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| La1.6 | 2 |
| lineage1.1.3.1 | 4 |
| lineage1.1.2 | 4 |
| lineage1.1.3 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
| La1.7.1 | 4 |
| La1.4 | 1 |
| La1.7 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.9.1 | 4 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage3.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.6.5 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR10796599 | Other | lineage4 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283009 | Other | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3468691 | Other | La1.8.1 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR3797013 | Other | La1.8.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187912 | Other | La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188381 | Other | La1.8.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4812577 | Sensitive | lineage4.3.3 | pe | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4772218 | Other | La1.2 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR751729 | Other | lineage1.1.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR8665811 | Pre-XDR-TB | lineage2.2 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR752240 | Sensitive | lineage1.1.1 | th | ERR9117787 | Sensitive | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR9786538 | Sensitive | lineage4.3.4.2 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013598 | HR-TB | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR10482948 | Other | La1.8.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR11294512 | Other | La1.8.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR10993957 | Other | La1.6 | None | SRR1173720 | Other | lineage4.9 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | SRR11342635 | MDR-TB | lineage4.8 | None | SRR1173416 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR11972221 | HR-TB | lineage2.2.1 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1792304 | Other | La1.8.1 | None | SRR16100231 | Sensitive | lineage4 | None | SRR16278273 | Other | La1.4 | None | SRR17111238 | Other | La1.7 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR1792372 | Other | La1.8.1 | None | SRR1792392 | Other | La1.8.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR18053779 | Other | La1.7.1 | None | SRR18391760 | Other | La1.7.1 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR2101767 | HR-TB | lineage4.1.2.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR176756 | Sensitive | lineage4.9.1 | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | ERR4814554 | Other | lineage4.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR192070 | Other | None | ERR4815517 | Other | lineage1.2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR4816951 | HR-TB | lineage4.1.2.1 | gb | ERR4816103 | Sensitive | lineage3 | gb | ERR4817349 | Other | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02414885 | MDR-TB | lineage4.3.3 | None | ERR4817025 | Sensitive | lineage2.2.1 | None | SRR3675557 | Other | lineage4.9 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR4818116 | Other | lineage4.3.4.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR245772 | Sensitive | lineage4.9.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4818444 | Other | lineage4.6.5 | None | ERR2513738 | Other | lineage1.1.3.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR4820264 | Other | lineage1.1.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4821775 | Other | lineage4 | None | ERR4820891 | Other | lineage4.9 | gb | SRR5217421 | Sensitive | lineage2.2.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4820614 | Other | lineage3.1.2 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR5382721 | Other | La1.8.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR2747678 | Other | La1.8.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821979 | Other | lineage4.1.2.1 | gb | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045056 | Other | lineage2.2.1 | gb | ERR4829238 | Sensitive | lineage3 | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829337 | Other | lineage4.8 | None | ERR4831711 | HR-TB | lineage2.2.1.1 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6896527 | Sensitive | lineage4.4.1.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | ERR323036 | HR-TB | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | ERR5087606 | Other | La1.8.1 | None | SRR9971296 | MDR-TB | lineage4.8 | None | ERR5311076 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR8600071 | Other | La1.8.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR323041 | HR-TB | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None |
|---|
