EBG00000313325 - n.837T>A
Drug resistance types
68 Sensitive
49 RR-TB
44 HR-TB
48 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 98 |
| lineage4.8 | 34 |
| lineage3 | 16 |
| lineage4.5 | 3 |
| lineage4 | 18 |
| lineage4.3.4.2.1 | 3 |
| lineage4;lineage2 | 1 |
| lineage2.2 | 4 |
| lineage4.6.1.2 | 5 |
| lineage2.2.2 | 3 |
| lineage4.1.1.3 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage2.2.1 | 44 |
| lineage1.1.1 | 2 |
| 7 | |
| lineage4.3.3 | 5 |
| lineage4.1.2.1 | 6 |
| lineage4.1.2 | 3 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| La1.8.1 | 13 |
| lineage4.7 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 4 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.6.2.2 | 3 |
| La1.7.X-unk4 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.1 | 4 |
| lineage4;La1.3 | 1 |
| La1.3 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 5 |
| lineage1.1.3.2 | 1 |
| lineage4.4.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.6.5 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2.1 | 2 |
| lineage3.1.3 | 1 |
| La1.7.1 | 3 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 345 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814976 | Other | lineage4.9 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815079 | RR-TB | lineage3 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3675587 | Sensitive | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229366 | Other | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816694 | Sensitive | lineage3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2229436 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | SRR4033523 | Other | lineage2.2 | None | ERR2228890 | Other | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817301 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR2228910 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818499 | Sensitive | lineage4.9 | None | ERR4818224 | Sensitive | lineage4.4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5485609 | RR-TB | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4819138 | Sensitive | lineage4.1.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820484 | Other | lineage4.8 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4820503 | Other | lineage2.2.1 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819933 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | ERR4820131 | Sensitive | lineage4.9 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045263 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4830493 | MDR-TB | lineage2.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4828628 | MDR-TB | lineage4.5 | None | SRR6046907 | Other | lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR8651655 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6896545 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR323037 | HR-TB | lineage4 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR485006 | HR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6797613 | Other | lineage4.3.4.2 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR6964650 | Sensitive | lineage3 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR4815816 | Other | lineage4.5 | gb | ERR5087846 | Other | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7517755 | HR-TB | lineage1.2.1.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR10796557 | Other | lineage4 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR017781 | Other | lineage3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439260 | Other | La1.8.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR3439441 | Other | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR4407473 | HR-TB | lineage4.3.4 | None | ERR4407536 | Sensitive | lineage4.4.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769543 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5866420 | MDR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9787033 | Sensitive | lineage6 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR9787336 | Other | lineage6 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10272566 | Other | lineage4.3.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15368707 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16370404 | HR-TB | lineage4.8 | None | SRR1792011 | Other | La1.8.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR22424727 | MDR-TB | lineage3.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR2229148 | Other | lineage4.8 | dk | ERR2229811 | Other | lineage4.8 | dk | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR3675219 | Other | lineage4.9 | None | ERR1750907 | RR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR1750889 | Other | lineage4.4.1.1 | None |
|---|
