EBG00000313325 - n.1277T>A


Drug resistance types
129 Sensitive 39 RR-TB 15 HR-TB 51 MDR-TB 27 Pre-XDR-TB 1 XDR-TB 122 Other
lineage Counts
lineage Count
lineage2.2.1 75
lineage4.1.1.3 8
lineage4.9 52
lineage1.1.2;lineage6.2.3 1
lineage4.8 17
lineage4.1.1.1 4
lineage4.3.4.2.1 11
lineage4.6.1.2 4
La1.8.1 27
lineage3.1.1 7
lineage4.1.2.1 6
La1.7.1 5
La1.8.X-unk6 1
lineage1.1.2;lineage4 1
lineage4.4.1.1 13
2
lineage6.1.1 3
lineage4.3.4.1 7
lineage2.2.1.1 4
La1.3 5
lineage4.3.3;lineage4.8 4
lineage4.3.2.1 11
lineage3 14
lineage4.4.1.1.1 2
lineage4.4.2 7
lineage4.6.5 2
lineage4.2.1.1 2
lineage2.2.1;lineage4.9 2
lineage2.2;lineage4 1
lineage1.1.3.2 4
lineage4.1.2 5
lineage2.2.1;lineage4.2.1 1
lineage4 3
lineage4.7 3
lineage4.3.3 15
lineage5.1.1 2
lineage4.3.2 2
lineage1.2.1.2.1 1
La1.2.BCG 1
lineage4.4.1.2 1
lineage4.2.1 11
lineage4.1 1
lineage4.9.1 2
lineage4.3.2.1;lineage4.9 1
lineage4.1.1.3.1 1
lineage4.1.2;lineage4.9 1
lineage2.2.2 4
lineage4.1.1.3;lineage4.9 2
lineage4.5 2
lineage4.1.1.2 2
lineage1.1.3.1 1
lineage4.3;lineage4.9 1
La2 1
lineage2.2.1;lineage4.5 1
lineage1.2.2.2 1
lineage4.6.1.1 1
La1.7.X-unk4 1
lineage1 1
lineage1.1.2 1
lineage4.3.4.1;lineage4.9 1
lineage4.6.2.2 2
lineage3.1.2.1 1
lineage4.3 1
La1.4 2
lineage4.4 1
La1.2 1
lineage4.2.2 1
lineage4.2.2.1 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 384
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR2101774 Sensitive lineage2.2.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR10614047 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR1184329 Other lineage4.9 None
SRR2101711 Sensitive lineage2.2.1 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR6855851 Other lineage4.3.4.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR7240537 Other La1.8.1 None
SRR1173310 Other lineage3.1.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR1173185 Other lineage4.9 None
SRR7240448 Other La1.8.1 None
ERR323048 Sensitive lineage4.9 None
SRR21469202 Other La1.7.1 None
SRR7240420 Other La1.8.X-unk6 None
SRR1792265 Other La1.8.1 None
SRR6981939 Other lineage4.3.4.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR4817102 Sensitive lineage1.1.2;lineage4 None
ERR5162133 Sensitive La1.8.1 None
ERR5311086 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR12420396 Sensitive lineage2.2.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
ERR4817069 RR-TB None
ERR9787323 Sensitive lineage6.1.1 None
SRR6982050 Other lineage4.3.4.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR1792022 Other La1.8.1 None
SRR7240324 Other La1.8.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR22424765 HR-TB lineage4.8 None
SRR6824516 Sensitive lineage2.2.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4769480 Other La1.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
ERR3799543 Sensitive lineage6.1.1 None
SRR15368751 Sensitive lineage2.2.1 None
SRR7131122 Other lineage2.2.1 None
SRR1181403 Other lineage4.9 None
SRR6824624 Sensitive lineage2.2.1 None
SRR6982092 Other lineage4.3.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR6484909 Sensitive lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR3725588 Sensitive lineage4.9 None
SRR7585400 MDR-TB lineage3 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR6982195 Sensitive lineage4.4.1.1 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6856094 Other lineage2.2.1 None
ERR3283033 Sensitive lineage4.9 None
ERR2515916 Other lineage4.3.4.2.1 za
SRR2101827 Other lineage4.3.4.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6824331 MDR-TB lineage4.4.2 cn
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4817204 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR3725586 Sensitive lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR5341288 Pre-XDR-TB lineage3 None
SRR1173385 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6397640 Other lineage4.2.1.1 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
SRR7240148 Other La1.8.1 None
ERR4188255 Sensitive lineage4.9 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
SRR18391772 Other La1.7.1 None
ERR4627392 Other La1.8.1 None
ERR5311080 Other La1.8.1 None
ERR3335798 MDR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR10430377 MDR-TB lineage2.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR2660524 HR-TB lineage1.1.3.2 None
DRR185048 Other lineage2.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101312 MDR-TB lineage2.2.1 None
ERR2513405 Other lineage2.2.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4769508 RR-TB lineage4.9 None
SRR7645927 Other lineage4.8 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR6982227 Sensitive lineage4.9 None
SRR7755652 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR3725585 Sensitive lineage4.9 None
ERR2509888 Sensitive lineage2.2.1 gb
ERR2179850 Sensitive lineage4 None
SRR5341460 Other lineage3 None
ERR5979454 Pre-XDR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR21469200 Other La1.7.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR7645928 Other lineage4.7 None
ERR4188213 Other La1.8.1 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6981981 Sensitive lineage4.3.3 None
ERR751345 Other lineage5.1.1 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR2515460 Other lineage4.8 za
SRR7645906 Other lineage2.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR1175474 Other lineage4.9 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR502517 Other lineage5.1.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR6855915 Sensitive lineage4.9 None
SRR7240506 Other La1.8.1 None
ERR9787000 Sensitive lineage4.1.2.1 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR6046376 Other lineage3 None
ERR5979407 Other lineage3 None
DRR184982 Other lineage2.2.1 None
SRR6982328 Other lineage3.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR1915484 Other La1.2.BCG None
ERR3324375 Other lineage1.1.3.2 None
ERR3468488 Other La1.8.1 None
SRR6982484 Other lineage3.1.1 None
SRR1173719 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR4769462 Other La1.3 None
ERR4811101 Other lineage4.4.2 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR2101636 Other lineage4.3.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
ERR4820484 Sensitive lineage4.8 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR2515854 Sensitive lineage2.2.1 None
SRR21714038 Sensitive lineage4.3.3 None
SRR6982419 Other lineage4.8 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
ERR2432997 Other lineage4.8 None
ERR4769517 Other La1.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR7240147 Other La1.8.1 None
SRR2101661 Sensitive lineage4.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
ERR4800297 Other lineage4.1.1.3 in
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR14801720 Other lineage4.8 None
SRR1062919 HR-TB lineage2.2.1 None
ERR4817915 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR5162118 Other La1.8.1 None
SRR1792011 Other La1.8.1 None
ERR4820586 Other lineage3 gb
SRR7070157 Other lineage4.1.1.3.1 None
ERR4830892 Pre-XDR-TB lineage2.2.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR10315558 RR-TB lineage2.2.1 None
SRR21728339 Other lineage3 None
ERR4188010 Other La1.8.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
ERR4769530 RR-TB lineage4.9 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
SRR6824683 MDR-TB lineage4.4.2 cn
SRR1180440 Other lineage4.9 None
SRR6982057 HR-TB lineage4.3.3 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
ERR4769419 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
SRR1181256 Other lineage4.9 None
SRR3725596 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3468613 Other La1.8.1 None
SRR6855917 Sensitive lineage4.8 None
DRR184903 Sensitive lineage2.2.2 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR5162090 RR-TB lineage4.9 None
ERR216930 Sensitive lineage4.3.4.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR2179857 Sensitive lineage4 None
SRR2101689 Sensitive lineage4.3.4.1 None
ERR2515484 Sensitive lineage4.8 None
ERR4820503 Sensitive lineage2.2.1 None
SRR2101685 Sensitive lineage4.9 None
ERR1750907 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6824328 MDR-TB lineage4.5 cn
ERR4769479 Other La1.3 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR10869071 MDR-TB lineage2.2.1 None
ERR3439489 RR-TB La1.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR8975044 Other lineage4.1.1.2 None
ERR2515148 Sensitive lineage4.3.3 None
SRR6982148 Sensitive lineage2.2.1 None
SRR2101816 Other lineage4.8 None
ERR4814610 Sensitive lineage3 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR6855718 Other lineage4.8 None
SRR12199461 Sensitive lineage1.1.3.1 None
ERR5087596 Other La1.8.1 None
ERR2517074 Pre-XDR-TB lineage3 gb
SRR20969542 Other lineage4.4.2 None
SRR6824680 RR-TB lineage2.2.1 cn
ERR970449 RR-TB lineage4.1.1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR5087846 Other La1.8.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR1062820 Pre-XDR-TB lineage2.2.1 None
ERR4769507 Sensitive lineage4.9 None
ERR4812328 Other lineage4.3.3 pe
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR3725595 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR6982334 Sensitive lineage4.4.1.1 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR736820 MDR-TB lineage1.2.2.2 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4188253 Other La1.8.1 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR5311077 Other La1.8.1 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6397389 Sensitive lineage4.1.2.1 None
SRR6982414 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR1792024 Other La1.8.1 None
ERR212114 Other lineage4.3.4.2.1 None
SRR2101663 Sensitive lineage1.1.3.2 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR212082 Sensitive lineage4.9.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR6982056 Other lineage4.3.4.2.1 None
SRR21737226 Sensitive lineage4.5 None
SRR6981975 Sensitive lineage4.7 None
ERR3445487 Other La1.7.X-unk4 None
SRR6896340 Sensitive lineage4.4.1.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR6982198 HR-TB lineage1 None
SRR6982088 Other lineage4.1.1.2 None
SRR4033549 Other lineage2.2.2 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR17406750 Other lineage1.1.2 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR2101691 Other lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
DRR184913 Sensitive lineage2.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR6824298 Sensitive lineage4.4.2 cn
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR7646014 MDR-TB lineage4.2.1 None
SRR1196478 Other lineage4.9 None
SRR1792012 Other La1.8.1 None
ERR3283006 RR-TB lineage4.9 None
SRR2101617 Sensitive lineage4.1.1.1 None
ERR161173 Sensitive lineage4.3.4.2.1 None
SRR6982106 Sensitive lineage4.8 None
SAMN02350409 Pre-XDR-TB lineage2.2.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR9787099 Sensitive lineage6.1.1 None
ERR4187652 Other lineage4.9 None
ERR4819910 Sensitive lineage4.9 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR6982196 Sensitive None
SRR6044952 Other lineage4.9 None
SRR1792232 Other La1.7.1 None
SRR18391683 Other La1.7.1 None
SRR7755657 Other lineage4.8 None
ERR9285816 Sensitive lineage4.3.3 None
SRR21676318 Sensitive lineage2.2.1 None
ERR4816702 Other lineage4.6.2.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR10762318 Pre-XDR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
ERR2515721 Sensitive lineage4.3.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR6866241 Other lineage4.3.2 None
ERR4815556 RR-TB lineage3 None
SRR1140724 Other lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR1238559 Other lineage4.9 None
ERR8025347 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
ERR4627379 Other La1.8.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR16278292 Other La1.4 None
SRR6824684 MDR-TB lineage2.2.1 cn
SRR14782539 MDR-TB lineage4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR3725590 Sensitive lineage4.9 None
ERR3439265 Sensitive lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR6982048 Sensitive lineage4.3.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR6045002 RR-TB lineage4.9 None
ERR4811708 HR-TB lineage4 None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR21714045 Other lineage2.2.1 None
ERR4821811 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR6982514 Sensitive lineage4.3.3 None
ERR4830864 MDR-TB lineage4.4.1.1 sz
SRR6982141 Other lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR11972188 MDR-TB lineage2.2.1 None
ERR4818583 Other lineage4.3.3 None
SRR1792025 Other La1.8.1 None
ERR3324354 Sensitive lineage4.8 None
SRR6982139 Sensitive lineage4.9 None
SRR1011450 Pre-XDR-TB lineage2.2.1 None
SRR17856664 Sensitive lineage3 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6982494 Other lineage2.2.2 None
SRR16278273 Other La1.4 None
SRR6896255 Sensitive lineage4.3.3 None
ERR4815079 RR-TB lineage3 None
SRR13199734 Other La1.2 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR11972283 MDR-TB lineage2.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR6824678 RR-TB lineage4.2.2 cn
ERR171135 Other lineage2.2.1 za
SRR21764246 Other lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR10129602 Sensitive lineage4.3.4.2 None
SRR6789628 Sensitive lineage4.9 None
SRR7240350 Other La1.8.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None