EBG00000313339 - n.819C>T
Drug resistance types
12 Sensitive
44 RR-TB
15 HR-TB
45 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
174 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.5 | 3 |
| lineage4.1.2.1 | 18 |
| lineage4.1.1.2 | 1 |
| lineage4.3.2 | 2 |
| lineage3.1.3 | 2 |
| lineage4.1.1.3 | 9 |
| lineage4.3.1.1 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.4.1.1 | 9 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.7 | 4 |
| lineage4.3.3 | 8 |
| lineage2.2.1 | 50 |
| lineage4.8.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.9 | 40 |
| lineage4 | 17 |
| La2 | 1 |
| lineage3.1.1 | 4 |
| lineage4.4.2 | 3 |
| lineage4.3.4.1 | 5 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage2.2.2 | 5 |
| lineage4.2.2 | 1 |
| lineage4.5 | 1 |
| La1.8.1 | 9 |
| lineage2.2.1.1 | 3 |
| lineage2.2 | 3 |
| lineage3 | 10 |
| lineage4.4 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.8 | 35 |
| lineage4.3.4.2 | 5 |
| lineage6 | 1 |
| La1.7.1 | 3 |
| lineage6.1.1 | 1 |
| 4 | |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.8;lineage4.1.2 | 1 |
| lineage5 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.8.2 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.1.4 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 314 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16370621 | Sensitive | lineage4.1.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR18911982 | Other | lineage4.4 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303798 | Sensitive | lineage4.4.1.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19304094 | Other | lineage6 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19317519 | Sensitive | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR2229811 | Other | lineage4.8 | dk | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814656 | Other | None | SRR3675227 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR2229810 | Other | lineage4.8 | None | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | SRR3675265 | Other | lineage4 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR2229540 | Other | lineage4.8 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816969 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675565 | Other | lineage3 | None | ERR2229147 | Other | lineage4.8 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2229801 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2510387 | Pre-XDR-TB | lineage4.9 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4820060 | Other | lineage4.3.3 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820133 | Sensitive | lineage1.1.3.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046020 | Other | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045178 | Other | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6046442 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046482 | HR-TB | None | SRR6046497 | Other | lineage4.9 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046729 | Other | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR7131123 | Other | lineage4.8 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5087500 | Other | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131104 | HR-TB | lineage4.3.4.2 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR9971070 | MDR-TB | lineage4.8.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131288 | Other | lineage4.6.2.2 | None | SRR7517748 | HR-TB | lineage4.4.1.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR8600288 | Other | La1.8.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796597 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796635 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4024667 | Sensitive | lineage4.3.3 | None | ERR4457826 | Sensitive | lineage4.3.3 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3439502 | Other | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None |
|---|
