EBG00000313339 - n.697C>T
Drug resistance types
19 Sensitive
31 RR-TB
13 HR-TB
42 MDR-TB
24 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 62 |
| lineage4.8 | 9 |
| lineage4.1.2.1 | 4 |
| lineage4.9 | 62 |
| lineage3 | 5 |
| lineage4.1.1.1 | 4 |
| La1.7.1 | 3 |
| lineage4 | 3 |
| lineage4.1.3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| La1.8.1 | 4 |
| lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.4.1 | 4 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 5 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 3 |
| lineage4.3.3;lineage4.8 | 2 |
| lineage4.4.2 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage4.7 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1 | 3 |
| lineage5.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.6.1.2 | 3 |
| lineage3.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002963 | Other | lineage2.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR1173515 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR323037 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR7070144 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR867572 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867569 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR3675389 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | SRR3675582 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR867544 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None |
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