EBG00000313339 - n.838G>A


Drug resistance types
22 Sensitive 28 RR-TB 16 HR-TB 32 MDR-TB 20 Pre-XDR-TB 1 XDR-TB 143 Other
lineage Counts
lineage Count
lineage1.2.1.1 2
lineage4.6.2.2 2
lineage4.9 39
La3;lineage4.9 5
lineage2.2.2 5
lineage4.1.2.1 16
lineage2.2.1 41
lineage4.4.1.1.1 3
lineage4.3.4.2.1 4
lineage4.6.1.1 2
lineage4.5 2
lineage3.1.2.1 3
lineage4.2.1.1;lineage4.3.3 1
lineage4.8 18
lineage3 15
lineage3.1.1 2
lineage4.1.1.1 5
lineage6.1.3 2
lineage4.4.1.1 7
lineage4.8.2 1
lineage4.1.1.3 3
lineage3;lineage4 1
lineage4.1.3 1
lineage2.2.1.1 4
lineage4.2.2 2
lineage4.2.1 3
lineage1.1.2 1
lineage4.1.2.1;lineage4.9 1
La1.7.1 2
lineage4.3.1.1 5
lineage4.3.4.1;lineage4.9 2
lineage4.3.3 13
lineage4.2.2.2 6
La1.3 1
lineage4.1.1.3.1;lineage4.9 1
lineage1.1.3.1 3
lineage4.3.3;lineage4.9 1
lineage4.1.2 5
La1.2 2
lineage4.3 1
lineage4.1.1.3.1 2
lineage4.7 4
1
lineage1.1.1 2
lineage6.1.2 1
lineage4 1
La1.2;La1.8.1 1
lineage4.3.4.1 1
lineage1.2.1.2 1
La1.4 1
lineage4.3.2.1 1
lineage4.8.1 3
La1.6 1
lineage4.6 1
lineage4.3.4.2 1
lineage1.2.2 1
lineage1.2.1.2.1 1
lineage3.1.2.1;lineage4.9 1
lineage4.4.1.2 1
lineage5.1.1 1
lineage4.8.2;lineage4.9 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 262
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675261 Other lineage1.2.1.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR1238558 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR4816856 Other lineage4.1.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR867569 Other lineage4.9 None
ERR176605 HR-TB lineage4.3.4.2.1 mw
ERR1199132 Sensitive lineage4.6.1.1 None
ERR2514173 Other lineage4.5 gb
ERR4819011 Other lineage3.1.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR7069922 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR7070320 Other lineage4.8 None
SRR7070223 HR-TB lineage3 None
SRR7070134 Other lineage3.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR4814362 Other lineage4.8 None
ERR10796626 Other lineage4.1.2.1 None
SRR6046117 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
ERR4821119 Other lineage4.4.1.1 None
ERR867575 Other lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR2229234 Sensitive lineage4.8 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR6045603 Other lineage4.1.1.3 None
SRR3675230 Other lineage3;lineage4 None
SRR11342671 RR-TB lineage4.1.3 None
SRR10315579 Other lineage2.2.1.1 None
DRR188816 Other lineage4.2.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR18002963 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR4819533 Other lineage1.1.2 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4816758 Other lineage4.8 gb
ERR4820723 Other lineage4.4.1.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR7069193 Other lineage4.3.1.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
ERR3275190 Other lineage3 nl
SRR5818612 Other lineage4.2.2.2 None
SRR7069030 Other lineage3 None
SRR6045496 Other lineage6.1.3 None
ERR4769495 Other La1.3 None
SRR6045516 Other lineage3.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR3276170 Other lineage4.1.2.1 nl
ERR9117812 Other lineage4.3.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR10796636 Other lineage4.1.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
SRR18003042 Other lineage2.2.1 None
ERR4821679 Other lineage4.3.3 None
SRR6045957 Other lineage4.9 None
ERR4814617 Other lineage1.1.3.1 None
SRR7070461 Other lineage3 None
SRR7851312 Other La1.2 None
SRR18002908 Other lineage2.2.1 None
ERR2510804 Other lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR9117760 HR-TB lineage4.3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4821288 Other lineage4.7 None
ERR4817060 Other None
ERR4816852 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR10796635 Other lineage4.8 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4815783 Other lineage4.1.2.1 gb
ERR2513223 Sensitive lineage4.1.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7069319 Other lineage4.5 None
ERR4769493 Other lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR7069391 Other lineage4.9 None
SRR18002933 Other lineage2.2.1 None
ERR10796564 Other lineage4.3.3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR6045464 Other lineage4.1.1.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4816322 Other lineage4.9 None
ERR4818050 Sensitive lineage4.6.2.2 None
ERR4819314 HR-TB lineage1.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
SRR1735596 RR-TB lineage4.9 None
ERR2446509 Other lineage3 nl
ERR4820720 Other lineage4.1.2.1 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR18002976 Other lineage2.2.1 None
ERR10796571 Other lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR19304094 Other lineage6.1.2 None
ERR4798823 HR-TB lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR6046250 Other lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR7070293 Other lineage4.8 None
ERR10796565 Other lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR3675527 Other lineage4.9 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR20969475 Other lineage1.2.1.2 None
ERR4814976 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4817294 Other lineage4.1.2 None
ERR4819622 Other lineage4.1.2.1 None
ERR4821704 Other lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4815572 Other lineage4.1.2.1 None
SRR6044904 Other lineage3 None
SRR7131145 Other lineage4.1.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR15276982 XDR-TB lineage3 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR7069839 Other lineage4.8 None
SRR16278274 Other La1.4 None
ERR867571 Other lineage4.9 None
SRR5007165 Other lineage3 None
SRR21469202 Other La1.7.1 None
ERR2027230 Other lineage4.2.2.2 None
SRR9971168 Other lineage4.3.2.1 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR10796576 Sensitive lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR6045359 HR-TB lineage4.9 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR10993951 RR-TB La1.6 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR11349193 RR-TB lineage4.1.2 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
ERR3797079 Sensitive lineage4.9 None
SRR7131123 Other lineage4.8 None
ERR4822138 Other lineage4.1.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796633 Other lineage4.3.4.2 None
SRR18909918 Other lineage2.2.1.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR4816610 Other lineage4.3.3 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
ERR067712 Sensitive lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
ERR867573 Other lineage4.9 None
SRR6046343 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR10796563 Other lineage4.3.3 None
ERR4818126 Other lineage1.2.2 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR4820107 Other lineage1.2.1.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR867526 MDR-TB lineage2.2.1 None
SRR22424787 Sensitive lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR9971223 Other lineage2.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
SRR19304057 Sensitive lineage4.4.1.2 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6046020 Other lineage3 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR502517 Other lineage5.1.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6046616 Other lineage4.3.1.1 None
ERR4817189 Other lineage4.7 None
ERR10796578 Other lineage2.2.1 None
ERR867544 Other lineage4.9 None
ERR9117788 Other lineage3 None
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR6045422 Other lineage4.3.1.1 None
ERR10796577 Other lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR867538 Other lineage4.2.2.2 None
ERR4817554 Other lineage1.1.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR16156775 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003023 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None