EBG00000313339 - n.653_654delTG
Drug resistance types
5 Sensitive
4 RR-TB
23 HR-TB
13 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage2.2.1 | 2 |
| lineage4.8 | 1 |
| La3;lineage4.3.4 | 1 |
| La1;lineage4.9 | 2 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.8.1 | 2 |
| La2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.1.1 | 1 |
| La1.2 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693252 | HR-TB | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR13888750 | Other | La2 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR6044875 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR473332 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1180446 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR4769427 | Other | La1.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None |
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