EBG00000313339 - n.2419A>G
Drug resistance types
10 Sensitive
14 RR-TB
8 HR-TB
12 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4.9 | 27 |
| lineage2.2.1 | 13 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage3 | 7 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.4.2.1 | 3 |
| La1.2;La1.8.1 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| La2 | 1 |
| La1.7.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage3;lineage4 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.8 | 3 |
| lineage2.2.2 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792022 | Other | La1.8.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR9786076 | Other | lineage3 | None | ERR3468613 | Other | La1.8.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4817434 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1173740 | Other | lineage3;lineage4 | None | ERR3276144 | Other | lineage3 | nl | ERR736831 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR3468488 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173185 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR21469202 | Other | La1.7.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4769508 | RR-TB | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None |
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