EBG00000313339 - n.2419A>G
Drug resistance types
15 Sensitive
23 RR-TB
16 HR-TB
30 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 6 |
| lineage4.9 | 39 |
| lineage2.2.1 | 24 |
| lineage2.2.2 | 5 |
| lineage4.4.2 | 1 |
| La1.7.1 | 3 |
| lineage4.8 | 8 |
| lineage4.4.1.1 | 4 |
| lineage4 | 14 |
| lineage4.3.3 | 3 |
| lineage2.2 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage3 | 14 |
| lineage3.1.3 | 1 |
| 4 | |
| lineage4.5 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.2 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage6 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| La2 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792011 | Other | La1.8.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815471 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR1750908 | Sensitive | lineage4 | None | ERR1750943 | Sensitive | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675533 | Sensitive | lineage3 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2229760 | Other | lineage4.8 | dk | SRR3675555 | HR-TB | None | ERR2446509 | Other | lineage3 | nl | ERR4817109 | Other | lineage3 | None | ERR4817434 | Other | lineage3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR4034653 | Sensitive | lineage2.2.1 | None | ERR4816828 | Other | lineage1.1.1 | gb | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR3276144 | Other | lineage3 | nl | ERR4819357 | Other | lineage4.9 | None | ERR2512599 | Other | lineage3 | gb | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819462 | Other | lineage4 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819933 | Other | lineage4.9 | None | ERR4820161 | Other | lineage3 | None | ERR4820130 | Other | lineage3 | None | ERR4822133 | MDR-TB | lineage3 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5526696 | MDR-TB | lineage2.2.1.1 | None | SRR6046087 | Other | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR6046210 | Other | lineage4 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6797420 | Sensitive | lineage1.2.2.2 | None | SRR6982246 | Sensitive | lineage4 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR3275190 | Other | lineage3 | nl | ERR5087855 | Other | La1.8.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR036207 | Other | lineage4.9 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | ERR4811708 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9119120 | Other | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1175473 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None |
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