lineage | Count |
---|---|
lineage4 | 77 |
lineage3.1.2.1 | 4 |
lineage4.9 | 134 |
lineage2.2.1 | 107 |
lineage2.2.2 | 6 |
lineage4.4.1.1 | 20 |
41 | |
lineage4.1.2.1 | 51 |
lineage4.2.2.2 | 5 |
lineage1.1.1.1 | 2 |
lineage4.6.2.2 | 7 |
lineage1.1.3.1 | 5 |
lineage4.6 | 2 |
lineage4.3.2 | 3 |
lineage3 | 55 |
lineage1.2.2.2 | 4 |
lineage4.3 | 2 |
lineage4.3.1.1 | 2 |
lineage1.1.1 | 3 |
lineage4.8.2 | 3 |
lineage5.2 | 2 |
lineage6.1.3 | 2 |
lineage4.1.1.3 | 13 |
lineage6 | 2 |
lineage4.7 | 7 |
lineage4.8 | 38 |
lineage4.3.4.2.1 | 8 |
lineage4.8;lineage4.3.3 | 4 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.3.3 | 23 |
lineage4.4.1.1.1 | 2 |
lineage4.8.1 | 2 |
lineage4.3.2.1 | 6 |
La1.8.1 | 16 |
lineage4.6.1.1 | 3 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 5 |
lineage2 | 2 |
lineage4.2.1 | 4 |
lineage4.4.2 | 5 |
lineage3.1.1 | 6 |
La2 | 1 |
La1.4 | 1 |
lineage4.3.4.1 | 3 |
lineage2.2.1.1 | 7 |
lineage4.2.2 | 2 |
lineage4.5 | 3 |
lineage3.1.3 | 5 |
lineage4.3.4.2 | 3 |
La1.2 | 2 |
lineage1.2.1.2 | 1 |
lineage4.1.2;lineage3.1 | 2 |
La1.7.1 | 3 |
lineage1.1.2 | 10 |
lineage4.1.1 | 7 |
lineage1.1.3.2 | 1 |
lineage4.9;lineage3.1.1 | 1 |
lineage2.1 | 4 |
lineage1.2.1.1 | 2 |
lineage4.1.3 | 2 |
lineage3.1 | 2 |
lineage1.2.1.2.1 | 2 |
lineage4.1.2 | 6 |
lineage4;lineage2 | 2 |
lineage4.1.1.3.1 | 7 |
lineage1 | 1 |
lineage4;lineage3 | 1 |
lineage4.6.3 | 1 |
lineage3.1.2.2 | 4 |
lineage4.2.2.2;lineage3 | 1 |
lineage4.4 | 1 |
lineage3.1.2 | 1 |
lineage4.1.4 | 1 |
lineage4.6.5 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1 | 1 |
lineage5.1.1 | 1 |
lineage6.3.1 | 1 |
lineage4.6.1.2 | 1 |
lineage4.9.1 | 1 |
lineage4.9;lineage1.1 | 1 |
lineage4.9;lineage4.3.4 | 1 |
lineage4.9;lineage4.1 | 1 |
lineage4.3.4 | 2 |
lineage4.4.1.2 | 1 |
La1.3 | 7 |
lineage4;La1.3 | 1 |
lineage4.9;La1.3 | 2 |
spoligotype | Count |
---|---|
None | 798 |
ID | Drug resistance | Lineage | Country iso2 | ERR4799378 | Sensitive | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358979 | Other | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866104 | Sensitive | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866832 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117788 | Other | lineage3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9117837 | Other | lineage4.8.2 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9787336 | Other | lineage6 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808471 | Sensitive | lineage4.1.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181250 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR124451 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16278274 | Other | La1.4 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18213721 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19304096 | Other | La1.2 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304104 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21677872 | Sensitive | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | ERR4814362 | Other | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR4815310 | Other | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815784 | Other | lineage2.2.1 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814576 | Sensitive | lineage4.8 | gb | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR4814723 | Sensitive | lineage4.1.2.1 | gb | ERR702405 | Sensitive | lineage2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR4814748 | Other | lineage4.8 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815792 | Other | lineage4.1.2.1 | None | SRR3675513 | Other | lineage4.8 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816988 | Other | lineage3 | gb | ERR2027220 | Other | lineage3.1.3 | None | ERR2027277 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4817043 | Sensitive | lineage4.8.2 | gb | ERR4816150 | Sensitive | lineage4.1.2.1 | gb | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4817046 | Other | lineage3 | None | ERR4816231 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817089 | HR-TB | lineage1.2.1.2.1 | gb | ERR2446509 | Other | lineage3 | nl | ERR4816464 | Other | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR4817109 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR4816531 | Other | lineage4.1.2 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR4817175 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR2184533 | Sensitive | lineage4.1.2.1 | pe | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR3275588 | Sensitive | lineage4.4.1.1 | nl | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818986 | Other | lineage4.3.2.1 | gb | ERR4818698 | HR-TB | lineage2.2.1 | gb | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2513405 | Other | lineage2.2.1 | None | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4817948 | Other | lineage3 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2512429 | Sensitive | lineage4.8 | gb | ERR4819017 | RR-TB | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818107 | Sensitive | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818121 | Other | lineage4.7 | gb | ERR4818322 | Other | lineage4.1.2.1 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR4818831 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818296 | Other | lineage4.2.2 | None | ERR2512599 | Other | lineage3 | gb | ERR4818904 | Other | lineage4.8 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR2512660 | Sensitive | lineage3 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818536 | Other | lineage4.9 | None | ERR4818548 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818952 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5341453 | Sensitive | None | ERR2512884 | Other | lineage4.6.2.2 | gb | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4819166 | Other | lineage3 | gb | ERR4820713 | HR-TB | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR2513743 | Other | lineage4.1.2 | None | ERR4819192 | Other | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5341387 | Other | lineage4 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR2513910 | Other | lineage3 | gb | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820290 | Other | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2513924 | RR-TB | lineage4.8 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2513994 | MDR-TB | lineage2.2.1 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819456 | Other | lineage4.8 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR2514328 | Sensitive | lineage4.1.2.1 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR2514533 | Other | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819766 | Other | lineage4.4.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819770 | Other | lineage4.8 | gb | SRR5341455 | Sensitive | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | SRR5341300 | Other | lineage4 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2514834 | Other | lineage4.7 | None | ERR1023509 | Other | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR2515032 | Other | lineage3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820092 | Other | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820161 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820690 | Other | lineage4.1.1 | gb | ERR4820193 | Other | lineage3 | None | ERR4821057 | HR-TB | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR5341469 | Other | lineage4 | None | SRR6046087 | Other | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821861 | Other | lineage4.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821154 | Other | lineage2.2.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4821865 | Other | lineage2.2.1 | gb | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821200 | Other | lineage4.1.1 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | ERR4821386 | Sensitive | lineage4.1.2.1 | gb | ERR4822074 | MDR-TB | lineage2.2.1 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4822225 | Sensitive | lineage3 | gb | ERR4821761 | Other | lineage3 | gb | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4822280 | Other | lineage4.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045572 | Sensitive | lineage4.6.3 | gb | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045726 | Other | lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045742 | Sensitive | lineage3 | gb | SRR6045778 | Other | lineage3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045892 | Sensitive | None | SRR6044787 | Other | lineage4.4 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045952 | HR-TB | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045986 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046020 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046208 | Other | lineage4 | None | SRR6045289 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045379 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4828962 | Other | lineage4.1.4 | it | ERR4828257 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6046442 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046497 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046729 | Other | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6511621 | HR-TB | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046848 | Other | lineage4.6.5 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831969 | Pre-XDR-TB | lineage2.1 | vn | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6896198 | Other | lineage2.2 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6982272 | Sensitive | lineage4.9 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | ERR3275190 | Other | lineage3 | nl | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982070 | RR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5087486 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7496471 | Sensitive | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323107 | Other | lineage4 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | DRR185024 | Other | lineage2.2.2 | None | DRR184629 | Other | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR036215 | Other | lineage4.8 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR1034634 | HR-TB | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063896 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796629 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR144568 | Pre-XDR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3439429 | Other | La1.8.1 | None | ERR3287772 | Sensitive | lineage4.1.2.1 | pe | ERR3797015 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR4024991 | Other | None | ERR3797019 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4586795 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4797717 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798099 | Other | None |
---|