EBG00000313325 - n.1137G>A
Drug resistance types
93 Sensitive
32 RR-TB
16 HR-TB
49 MDR-TB
16 Pre-XDR-TB
3 XDR-TB
144 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 55 |
| lineage5.1.3 | 1 |
| La1.7.1 | 3 |
| lineage4.3.3 | 13 |
| lineage3 | 32 |
| lineage4.8 | 10 |
| lineage1.2.2.2 | 8 |
| lineage4.9 | 50 |
| lineage2.2 | 2 |
| lineage1.1.2 | 14 |
| lineage4.1.1.3 | 13 |
| lineage4.3.4.2.1 | 10 |
| lineage4.6.2.2 | 3 |
| lineage4.4.1.1 | 5 |
| lineage4.6.4 | 1 |
| 4 | |
| lineage4.1.2.1 | 19 |
| La1.2.BCG | 4 |
| lineage4.1.3 | 2 |
| lineage4.9.1 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.6.3 | 2 |
| lineage4.8.2 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage3.1.2 | 4 |
| lineage4.3.4.2 | 3 |
| lineage4.5 | 2 |
| lineage6.3.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1.3.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4 | 7 |
| La3 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.1 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.6.1.1 | 4 |
| La1.8.1 | 16 |
| lineage5.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.9;La1.8.1 | 2 |
| La1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1.1 | 2 |
| La1.8.2 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.6 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.2 | 2 |
| lineage4.4 | 1 |
| lineage1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 353 |
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303931 | Other | lineage2.2.1 | None | SRR19303791 | Sensitive | lineage5.1.3 | None | SRR21469200 | Other | La1.7.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR21469202 | Other | La1.7.1 | None | ERR4815261 | Other | lineage4.8 | gb | ERR4815160 | Other | lineage1.2.2.2 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4815627 | Other | lineage4.1.1.3 | gb | ERR176814 | Sensitive | lineage4.3.4.2.1 | mw | ERR4814399 | Other | lineage4.6.2.2 | gb | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1679639 | Other | lineage4.6.4 | None | ERR1750874 | Sensitive | lineage4.8 | bw | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR171135 | Other | lineage2.2.1 | za | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR1750907 | RR-TB | None | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR1750924 | Sensitive | lineage4.8 | za | ERR1750923 | Sensitive | lineage4.8 | za | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4814787 | Sensitive | lineage4.3.3 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR4816147 | RR-TB | lineage2.2.1 | gb | ERR4816167 | Other | La1.2.BCG | gb | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | SAMN02598990 | Sensitive | lineage1.1.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816569 | Other | lineage4.3.3 | gb | SAMN02599052 | Sensitive | lineage2.2.1 | None | ERR4816690 | Other | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR2513384 | Other | lineage4.8.2 | gb | ERR4817274 | Other | lineage4.9 | gb | SAMN02599074 | Other | lineage1.2.1.2.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR4817310 | Other | lineage4.9 | None | SAMN02599056 | Other | lineage3.1.2 | in | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4817972 | Other | lineage4.1.1.3 | gb | SAMN02599130 | MDR-TB | lineage3 | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818190 | Other | lineage4.8 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818145 | Other | lineage3 | gb | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818200 | Other | lineage3.1.2 | gb | SRR7898217 | MDR-TB | lineage1.1.2 | None | ERR4818855 | Other | lineage4.1.2.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR4818904 | Other | lineage4.8 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4818440 | Other | lineage6.3.1 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR2510354 | MDR-TB | lineage3 | pk | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR2513738 | Other | lineage1.1.3.1 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR2513699 | Other | lineage4.1.2 | gb | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819575 | Sensitive | lineage4 | None | SAMN02599071 | Sensitive | lineage3 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820026 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR2515007 | Other | lineage3 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR2516279 | Sensitive | lineage4.1.2.1 | be | ERR4820030 | Other | lineage4.9 | None | ERR4820130 | Other | lineage3 | None | ERR4820192 | Other | La3 | None | ERR2515226 | Sensitive | lineage2.2.1 | None | SRR5341346 | Sensitive | lineage3 | None | ERR2747620 | Sensitive | lineage4.9 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821848 | Other | lineage2.2.1 | None | SRR6046106 | Sensitive | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821940 | Other | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | SRR6045599 | Other | lineage4.8 | None | ERR4822033 | Other | lineage3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821516 | Other | lineage3 | None | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821572 | Other | lineage2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046291 | Other | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6045162 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829038 | Other | La1.2.BCG | it | ERR4828743 | Sensitive | lineage2.2.1 | vn | ERR4828514 | HR-TB | lineage2.2.1 | None | ERR4828772 | HR-TB | lineage2.2.1 | None | ERR4828746 | Sensitive | lineage2.2.1 | vn | ERR4828749 | Sensitive | lineage2.2.1 | None | ERR4828764 | Sensitive | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046602 | HR-TB | lineage4.1.2.1 | gb | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR502479 | RR-TB | lineage4.9 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6855734 | Sensitive | lineage4.3.2.1 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR5311095 | Other | La1.8.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9596066 | Other | La1.2.BCG | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR10796627 | Other | lineage4 | None | ERR038289 | Other | lineage4.3.3 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283058 | Other | lineage4.9 | None | ERR3439373 | Other | La1.8.1 | None | ERR3439294 | Other | lineage4.9 | None | ERR3797059 | Sensitive | lineage4.9 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR3797027 | Other | La1.8.1 | None | ERR3797076 | Other | La1.8.1 | None | ERR3797072 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR4024562 | Sensitive | lineage4.1.1.3 | None | ERR4187652 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4187607 | Other | La1.8.1 | None | ERR4025073 | Sensitive | lineage4.1.1.3 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4188099 | Other | La1.8.1 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4796888 | Sensitive | lineage3 | in | ERR4188403 | Other | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796479 | XDR-TB | lineage2.2.1 | in | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4799131 | XDR-TB | lineage2.2.1 | in | ERR5987400 | MDR-TB | lineage2.2.1.1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359073 | Sensitive | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR6866046 | Sensitive | lineage4.1.1.3 | None | ERR751414 | MDR-TB | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR8773691 | HR-TB | lineage4.2.1 | None | ERR6866049 | Sensitive | lineage4.1.1.3 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117704 | Other | lineage4.6 | None | ERR9029854 | Pre-XDR-TB | lineage4.3.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9119892 | MDR-TB | lineage2.2.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10305656 | Other | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11348155 | Sensitive | lineage1.1.2 | None | SRR11348178 | Sensitive | lineage1.1.2 | None | SRR11348198 | Sensitive | lineage1.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1169574 | Sensitive | lineage1.1.2 | None | SRR1166825 | Other | lineage3 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172293 | Sensitive | lineage1.1.2 | None | SRR1172322 | Sensitive | lineage1.1.2 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR1172915 | Other | lineage1.2.1.2.1 | None | SRR1172805 | Sensitive | lineage1.2.2.2 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR1172874 | Sensitive | lineage2.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173045 | Sensitive | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173445 | Sensitive | lineage3 | None | SRR1175105 | MDR-TB | lineage3 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1175053 | Other | lineage1.2.1.2.1 | None | SRR1175108 | Other | lineage3.1.2 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180487 | Sensitive | lineage1.1.2 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972187 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR12142324 | Sensitive | lineage4.5 | None | SRR12142330 | HR-TB | lineage4.4.2 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12142410 | MDR-TB | lineage4.4.2 | None | SRR12142391 | Sensitive | lineage4.4 | None | SRR12199442 | HR-TB | lineage1.2.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14781861 | MDR-TB | lineage4.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR1735706 | Other | La1.2.BCG | gb | SRR16295765 | Other | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR18002940 | Sensitive | lineage2.2.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18002971 | Other | lineage2.2.1 | None | SRR18002979 | Sensitive | lineage2.2.1 | None |
|---|
