EBG00000313339 - n.545T>A
Drug resistance types
7 Sensitive
9 RR-TB
13 HR-TB
21 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage2.2.1 | 17 |
| lineage4 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.1.2.1 | 1 |
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| lineage4.8 | 3 |
| lineage4.9;lineage7 | 2 |
| lineage6.3.1 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| La1.3 | 1 |
| lineage4.3.4.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| 1 | |
| lineage4.6.5 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.3;lineage4.9 | 1 |
| La2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage5.1.1 | 1 |
| lineage3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR176718 | Sensitive | lineage2.2.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR4820151 | Other | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1183153 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR502523 | Other | lineage6.3.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR11466514 | Sensitive | lineage4.3.4.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4796577 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR13888750 | Other | La2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR751345 | Other | lineage5.1.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1184329 | Other | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1180446 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181403 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None |
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