EBG00000313339 - n.545T>A


Drug resistance types
8 Sensitive 8 RR-TB 13 HR-TB 19 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.9 20
lineage2.2.1 17
lineage4.3.4.1 3
lineage6.3.1 1
lineage4.1.1.3 3
lineage4.3.3 2
lineage4.3.3;lineage4.8 4
lineage4.6.2.2 2
lineage4.2.1.1 1
lineage4.1.2.1 1
lineage4.6.1.2 4
lineage3.1.1 1
lineage4.3.4.2.1 2
lineage4 1
lineage2.2.2 1
lineage4.3;lineage4.9 1
lineage5.1.1 1
lineage4.9;lineage7 2
La2 1
La1.7.1 1
1
lineage4.8 3
lineage4.6.5 1
lineage2.2.1;lineage4.5 1
La1.3 1
lineage3 1
lineage4.1.1.1 1
La1.8.1 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 80
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045359 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR11466514 Sensitive lineage4.3.4.1 None
SRR1181403 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR502523 Other lineage6.3.1 None
ERR4818561 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR4814639 HR-TB lineage4.9 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR1183153 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR6785281 Other lineage4.2.1.1 None
SRR1196478 Other lineage4.9 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1181256 Other lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4798823 HR-TB lineage4 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR4816762 Sensitive lineage4.9 None
ERR387051 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
ERR751345 Other lineage5.1.1 None
ERR5162090 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR13888750 Other La2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR1184329 Other lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR1140724 Other lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1175474 Other lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR4796577 HR-TB None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
ERR4820151 Other lineage4.8 None
ERR4820151 Other lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR7801176 RR-TB lineage4.6.5 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR067712 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR4818583 Other lineage4.3.3 None
ERR4769436 Other La1.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1173185 Other lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
SRR1792011 Other La1.8.1 None
ERR4815815 Sensitive lineage4.9 None
SRR13423546 Other lineage4.4.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR176718 Sensitive lineage2.2.1 None