EBG00000313339 - n.545T>A
Drug resistance types
23 Sensitive
12 RR-TB
21 HR-TB
27 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 7 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.8 | 12 |
| lineage2.2.1 | 22 |
| lineage4 | 7 |
| lineage4.3.3 | 5 |
| lineage4.9 | 17 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3 | 7 |
| lineage1.1.1 | 2 |
| La1.8.1 | 3 |
| lineage4.1.4 | 1 |
| lineage4.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.6 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.2 | 2 |
| La1.3 | 1 |
| 4 | |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.2 | 1 |
| lineage2.2 | 3 |
| lineage3.1.1 | 1 |
| La2 | 1 |
| lineage3.1.3 | 1 |
| La1.7.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817276 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818283 | Sensitive | lineage4.5 | gb | ERR2513298 | Other | lineage4.8 | gb | ERR4818583 | Other | lineage4.3.3 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4821276 | Other | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820494 | Sensitive | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2843451 | HR-TB | lineage1.1.1 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6045359 | Sensitive | lineage4.9 | None | ERR4828388 | HR-TB | lineage1.1.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR4828806 | Other | lineage4.1.4 | None | ERR4829746 | Sensitive | lineage4.8 | it | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502523 | Other | lineage6.3.1 | None | ERR4829365 | HR-TB | lineage4.1.2.1 | it | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR067712 | HR-TB | lineage4 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR036207 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR387051 | HR-TB | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972449 | MDR-TB | lineage2.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR1792011 | Other | La1.8.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR1750883 | Sensitive | lineage3 | zw | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | ERR1750874 | Sensitive | lineage4.8 | bw | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR1750896 | Sensitive | lineage2.2.1 | zw | ERR1750888 | Sensitive | lineage4.8 | zw | ERR1750885 | Sensitive | lineage2.2.1 | zw | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR1750922 | Sensitive | lineage4.1.1.3 | za | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR1750923 | Sensitive | lineage4.8 | za | ERR176718 | Sensitive | lineage2.2.1 | None | SRR3675456 | HR-TB | None | ERR4816991 | Sensitive | lineage4.9 | None | ERR4817046 | Other | lineage3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675555 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4817204 | RR-TB | lineage4.9 | None |
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