EBG00000313339 - n.2313C>T
Drug resistance types
26 Sensitive
77 RR-TB
27 HR-TB
97 MDR-TB
46 Pre-XDR-TB
2 XDR-TB
297 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 81 |
| lineage3 | 34 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 17 |
| lineage2.2.1 | 106 |
| lineage4.1.2.1 | 21 |
| lineage3.1.1 | 10 |
| lineage4.4.2 | 6 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.3 | 17 |
| lineage2.2.2 | 8 |
| lineage3.1.2.2 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.1.1.1 | 6 |
| lineage4 | 2 |
| lineage4.9 | 85 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 6 |
| lineage4.2.2.2 | 5 |
| lineage4.3.4.2 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.3.4.1 | 8 |
| lineage4.1.1.3 | 13 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.4 | 2 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.5 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.3.2 | 3 |
| lineage1.1.2 | 3 |
| La1.8.1 | 10 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 14 |
| lineage4.3.1.1 | 4 |
| lineage4.4.1.1.1 | 5 |
| lineage4.4.1.2 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 4 |
| lineage6.1.3 | 2 |
| lineage4.2.1.1 | 3 |
| lineage3;lineage4 | 2 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.2.2 | 2 |
| lineage4.1.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La2 | 1 |
| La1.7.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8.1 | 4 |
| lineage5.1.1 | 1 |
| La1.3 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.6 | 2 |
| lineage1.1.3.1 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 572 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR6046291 | Other | lineage3 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR5908124 | Other | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR7068885 | Other | lineage3 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR5163959 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR18213736 | Other | lineage3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5818386 | Other | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR978727 | Other | lineage4.8 | None | SRR5818426 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | ERR978693 | Other | lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR7069030 | Other | lineage3 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR5818389 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR7069074 | Other | lineage3 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3468488 | Other | La1.8.1 | None | SRR7069518 | Other | lineage4.8 | None | ERR2228899 | Other | lineage4.8 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR6046815 | Other | lineage3 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046208 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR7755642 | MDR-TB | lineage4.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR867573 | Other | lineage4.9 | None | ERR2228838 | Other | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR7645927 | Other | lineage4.8 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | DRR188816 | Other | lineage4.2.2 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR6044787 | Sensitive | lineage4.4 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR19303917 | Sensitive | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR6045496 | Other | lineage6.1.3 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR4769436 | Other | La1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR5818448 | Other | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR1184308 | RR-TB | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7069946 | Other | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR9117759 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR6045705 | Other | lineage4.9 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR978752 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR5818408 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818459 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR18002980 | Other | lineage2.2.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR7069189 | HR-TB | lineage4.1.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4769517 | Other | La1.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR7070461 | Other | lineage3 | None | SRR1173185 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR978694 | Other | lineage4.8 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1180440 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3468613 | Other | La1.8.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR10796599 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7069082 | Other | lineage4.1.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | SRR14334195 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR7068971 | Sensitive | lineage3 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007186 | Sensitive | lineage4.6 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR10796559 | Other | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR7069193 | Other | lineage4.3.1.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR7645928 | Other | lineage4.7 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7070419 | Other | lineage3 | None | SRR1792024 | Other | La1.8.1 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR10796560 | Other | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR2228910 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1173421 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045986 | Other | lineage3 | None | SRR3675509 | Other | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | SRR5007170 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR18002988 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7069377 | Other | lineage3 | None | SRR6044957 | Sensitive | lineage4.8.2 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6045928 | Other | lineage4.9 | None | SRR7069839 | Other | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7069760 | Other | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR1180446 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7068912 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SRR1173833 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR017781 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR7755657 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196478 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR867569 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR4819166 | Other | lineage3 | gb | SRR5818414 | Other | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR5818388 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4817915 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR21469202 | Other | La1.7.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1792012 | Other | La1.8.1 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR19303805 | Sensitive | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7068875 | Other | lineage3.1.2.2 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None |
|---|
